MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-091N22
Chromosome	5 (Build37)
Map Location	111,736,826 - 111,886,455
singlet/doublet	doublet
Overlap gene	Pitpnb, Mn1
Upstream gene	Pole, P2rx2, Gm1679, 2410025L10Rik, Galnt9, Noc4l, Ddx51, Ep400, Pus1, Ulk1, Hscb, Chek2, Ttc28
Downstream gene	A230057G18Rik, Cryba4, Crybb1, Tpst2, Tfip11, 2810002G02Rik, Hps4, EG625424, Asphd2, Sez6l, EG625464
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pole (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18973 MGI:1196391
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	P2rx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231602 MGI:2665170
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm1679 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381667 MGI:2686525
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410025L10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381668 MGI:1920907
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Galnt9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231605 MGI:2677965
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Noc4l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100608 MGI:2140843
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ddx51 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69663 MGI:1916913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ep400 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75560 MGI:1276124
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pus1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56361 MGI:1929237
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Ulk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22241 MGI:1270126
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hscb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100900 MGI:2141135
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chek2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50883 MGI:1355321
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttc28 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209683 MGI:2140873
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 192 ESTs, 1 Protein

name	Pitpnb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56305 MGI:1927542
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433938 MGI:1261813
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A230057G18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330166 MGI:2444886
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 ESTs

name	Cryba4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12959 MGI:102716
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crybb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12960 MGI:104992
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpst2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22022 MGI:1309516
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tfip11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54723 MGI:1930075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2810002G02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70118 MGI:1917368
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hps4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:192232 MGI:2177742
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG625424 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625424 MGI:3648511
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asphd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72898 MGI:1920148
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sez6l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56747 MGI:1935121
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG625464 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625464 MGI:3648937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 2 Proteins

name	Pole (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755123 GeneID:18973 MGI:1196391
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (DNA directed), epsilon transcript_id : NM_011132.1

name	P2rx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354790 GeneID:231602 MGI:2665170
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : purinergic receptor P2X, ligand-gated ion channel, 2 transcript_id : NM_153400.3

name	Gm1679 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371683 GeneID:381667 MGI:2686525
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 1679, (NCBI) transcript_id : NM_001033459.2

name	2410025L10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125347475 GeneID:381668 MGI:1920907
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410025L10 gene transcript_id : NM_028596.2

name	Galnt9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38142485 GeneID:231605 MGI:2677965
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 transcript_id : NM_198306.1

name	Noc4l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981993 GeneID:100608 MGI:2140843
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleolar complex associated 4 homolog (S. cerevisiae) transcript_id : NM_153570.2

name	Ddx51 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40538824 GeneID:69663 MGI:1916913
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 transcript_id : NM_027156.2

name	Ep400 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27414492 GeneID:75560 MGI:1276124
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : E1A binding protein p400 transcript_id : NM_029337.1

name	Pus1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91982769 GeneID:56361 MGI:1929237
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pseudouridine synthase 1 transcript_id : NM_001025562.2

name	Pus1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91982773 GeneID:56361 MGI:1929237
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pseudouridine synthase 1 transcript_id : NM_019700.4

name	Pus1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91982763 GeneID:56361 MGI:1929237
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pseudouridine synthase 1 transcript_id : NM_001025561.2

name	Ulk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254401 GeneID:22241 MGI:1270126
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Unc-51 like kinase 1 (C. elegans) transcript_id : NM_009469.3

name	Hscb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956361 GeneID:100900 MGI:2141135
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HscB iron-sulfur cluster co-chaperone homolog (E. coli) transcript_id : NM_153571.1

name	Chek2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377787 GeneID:50883 MGI:1355321
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CHK2 checkpoint homolog (S. pombe) transcript_id : NM_016681.3

name	Ttc28 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254130 GeneID:209683 MGI:2140873
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 192 ESTs, 1 Protein product : tetratricopeptide repeat domain 28 transcript_id : XM_001481308.1

name	Pitpnb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802542 GeneID:56305 MGI:1927542
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol transfer protein, beta transcript_id : NM_019640.3

name	Mn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486984 GeneID:433938 MGI:1261813
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : meningioma 1 transcript_id : NM_001081235.1

name	A230057G18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375118 GeneID:330166 MGI:2444886
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 ESTs product : RIKEN cDNA A230057G18 gene transcript_id : XM_489103.3

name	Cryba4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946671 GeneID:12959 MGI:102716
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : crystallin, beta A4 transcript_id : NM_021351.1

name	Crybb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130494 GeneID:12960 MGI:104992
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : crystallin, beta B1 transcript_id : NM_023695.2

name	Tpst2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981951 GeneID:22022 MGI:1309516
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein-tyrosine sulfotransferase 2 transcript_id : NM_009419.2

name	Tfip11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130732 GeneID:54723 MGI:1930075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tuftelin interacting protein 11 transcript_id : NM_018783.4

name	2810002G02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249055 GeneID:70118 MGI:1917368
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810002G02 gene transcript_id : NM_027323.1

name	Hps4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476086 GeneID:192232 MGI:2177742
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Hermansky-Pudlak syndrome 4 homolog (human) transcript_id : NM_138646.2

name	EG625424 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802475 GeneID:625424 MGI:3648511
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG625424 transcript_id : NM_001039228.2

name	Asphd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:55926228 GeneID:72898 MGI:1920148
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aspartate beta-hydroxylase domain containing 2 transcript_id : NM_028386.1

name	Sez6l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249081 GeneID:56747 MGI:1935121
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : seizure related 6 homolog like transcript_id : NM_019982.2

name	EG625464 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375085 GeneID:625464 MGI:3648937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 2 Proteins product : predicted gene, EG625464 transcript_id : XM_894605.2

name	Pole (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755124 CCDS:CCDS19525.1 GeneID:18973 MGI:1196391
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation note : DNA polymerase epsilon; pol-epsilon product : DNA polymerase epsilon catalytic subunit protein_id : NP_035262.1

name	P2rx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27544935 GeneID:231602 MGI:2665170
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004931 - ATP-gated cation channel activity [Evidence IDA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : purinergic receptor P2X, ligand-gated ion channel, 2 protein_id : NP_700449.2

name	Gm1679 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701975 GeneID:381667 MGI:2686525
definition	codon_start : 1 product : hypothetical protein LOC381667 protein_id : NP_001028631.1

name	2410025L10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125347476 GeneID:381668 MGI:1920907
definition	codon_start : 1 product : hypothetical protein LOC381668 protein_id : NP_082872.2

name	Galnt9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38142486 GeneID:231605 MGI:2677965
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 protein_id : NP_938048.1

name	Noc4l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981994 CCDS:CCDS19527.1 GeneID:100608 MGI:2140843
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005732 - small nucleolar ribonucleoprotein complex [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0030515 - snoRNA binding [Evidence ISS] GO_process : GO:0006365 - 35S primary transcript processing [Evidence ISS] codon_start : 1 product : nucleolar complex associated 4 homolog protein_id : NP_705798.2

name	Ddx51 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40538825 CCDS:CCDS19528.1 GeneID:69663 MGI:1916913
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA] codon_start : 1 product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 protein_id : NP_081432.2

name	Ep400 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27414493 CCDS:CCDS19529.1 GeneID:75560 MGI:1276124
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0016568 - chromatin modification [Evidence IEA] codon_start : 1 exception : mismatches in translation product : Domino protein_id : NP_083613.1

name	Pus1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70906470 CCDS:CCDS19531.1 GeneID:56361 MGI:1929237
definition	GO_component : GO:0005730 - nucleolus [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0030374 - ligand-dependent nuclear receptor transcription coactivator activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004730 - pseudouridylate synthase activity [Evidence IEA]; GO:0016439 - tRNA-pseudouridine synthase activity [Evidence IMP] [Evidence IDA] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0008033 - tRNA processing [Evidence IEA]; GO:0031119 - tRNA pseudouridine synthesis [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : pseudouridine synthase 1 isoform 2 protein_id : NP_062674.2

name	Pus1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70906468 CCDS:CCDS19530.1 GeneID:56361 MGI:1929237
definition	GO_component : GO:0005730 - nucleolus [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0030374 - ligand-dependent nuclear receptor transcription coactivator activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004730 - pseudouridylate synthase activity [Evidence IEA]; GO:0016439 - tRNA-pseudouridine synthase activity [Evidence IMP] [Evidence IDA] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0008033 - tRNA processing [Evidence IEA]; GO:0031119 - tRNA pseudouridine synthesis [Evidence IDA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : pseudouridine synthase 1 isoform 1 protein_id : NP_001020732.1

name	Pus1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70906472 GeneID:56361 MGI:1929237
definition	GO_component : GO:0005730 - nucleolus [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0030374 - ligand-dependent nuclear receptor transcription coactivator activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004730 - pseudouridylate synthase activity [Evidence IEA]; GO:0016439 - tRNA-pseudouridine synthase activity [Evidence IMP] [Evidence IDA] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0008033 - tRNA processing [Evidence IEA]; GO:0031119 - tRNA pseudouridine synthesis [Evidence IDA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : pseudouridine synthase 1 isoform 3 protein_id : NP_001020733.1

name	Ulk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254402 CCDS:CCDS19532.1 GeneID:22241 MGI:1270126
definition	GO_component : GO:0030659 - cytoplasmic vesicle membrane [Evidence IDA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0043005 - neuron projection [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007409 - axonogenesis [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007265 - Ras protein signal transduction [Evidence IDA] codon_start : 1 product : Unc-51 like kinase 1 protein_id : NP_033495.2

name	Hscb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956362 GeneID:100900 MGI:2141135
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0051087 - chaperone binding [Evidence IEA]; GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 product : J-type co-chaperone HSC20 protein_id : NP_705799.1

name	Chek2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710088 CCDS:CCDS19533.1 GeneID:50883 MGI:1355321
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : protein kinase Chk2; Cds1 homolog; Rad53 homolog product : CHK2 checkpoint homolog protein_id : NP_057890.1

name	Ttc28 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254131 GeneID:209683 MGI:2140873
definition	codon_start : 1 exception : unclassified translation discrepancy note : overriding stop codons product : similar to OTTHUMP00000028696 protein_id : XP_001481358.1 transl_except : (pos:111706166..111706168,aa:OTHER) transl_except : (pos:111706175..111706177,aa:OTHER) transl_except : (pos:111706232..111706234,aa:OTHER) transl_except : (pos:111707515..111707517,aa:OTHER) transl_except : (pos:111709188..111709190,aa:OTHER) transl_except : (pos:111710905..111710907,aa:OTHER) transl_except : (pos:111711823..111711825,aa:OTHER) transl_except : (pos:111711901..111711903,aa:OTHER) transl_except : (pos:111712969..111712971,aa:OTHER) transl_except : (pos:111712978..111712980,aa:OTHER) transl_except : (pos:111713014..111713016,aa:OTHER) transl_except : (pos:111713023..111713025,aa:OTHER) transl_except : (pos:111714019..111714021,aa:OTHER) transl_except : (pos:111714265..111714267,aa:OTHER) transl_except : (pos:111714268..111714270,aa:OTHER) transl_except : (pos:111714493..111714495,aa:OTHER) transl_except : (pos:111714598..111714600,aa:OTHER) transl_except : (pos:111714775..111714777,aa:OTHER) transl_except : (pos:111715003..111715005,aa:OTHER) transl_except : (pos:111715171..111715173,aa:OTHER) transl_except : (pos:111715183..111715185,aa:OTHER) transl_except : (pos:111715393..111715395,aa:OTHER)

name	Pitpnb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790159 GeneID:56305 MGI:1927542
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0008289 - lipid binding [Evidence IEA]; GO:0005543 - phospholipid binding [Evidence ISS] GO_process : GO:0001701 - embryonic development (sensu Mammalia) [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : phosphatidylinositol transfer protein beta isoform; Pitp beta; phosphotidylinositol transfer protein, beta product : phosphatidylinositol transfer protein, beta protein_id : NP_062614.1

name	Mn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486985 GeneID:433938 MGI:1261813
definition	GO_process : GO:0001957 - intramembranous ossification [Evidence IMP] codon_start : 1 product : meningioma 1 protein_id : NP_001074704.1

name	A230057G18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82899261 GeneID:330166 MGI:2444886
definition	codon_start : 1 product : hypothetical protein protein_id : XP_489103.2

name	Cryba4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946672 CCDS:CCDS19536.1 GeneID:12959 MGI:102716
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005212 - structural constituent of eye lens [Evidence IEA] GO_process : GO:0007423 - sensory organ development [Evidence IEA] codon_start : 1 function : lens structural protein product : crystallin, beta A4 protein_id : NP_067326.1

name	Crybb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963789 CCDS:CCDS19537.1 GeneID:12960 MGI:104992
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005212 - structural constituent of eye lens [Evidence IEA] GO_process : GO:0007423 - sensory organ development [Evidence IEA] codon_start : 1 product : crystallin, beta B1 protein_id : NP_076184.1

name	Tpst2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678421 CCDS:CCDS19538.1 GeneID:22022 MGI:1309516
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008476 - protein-tyrosine sulfotransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : protein-tyrosine sulfotransferase 2 protein_id : NP_033445.1

name	Tfip11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10190660 CCDS:CCDS19539.1 GeneID:54723 MGI:1930075
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA] [Evidence NAS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030154 - cell differentiation [Evidence NAS]; GO:0030198 - extracellular matrix organization and biogenesis [Evidence NAS]; GO:0001503 - ossification [Evidence IEA]; GO:0045045 - secretory pathway [Evidence NAS] codon_start : 1 note : tuftelin-interacting protein 33; tuftelin-interacting protein, 39 kD product : tuftelin interacting protein 11 protein_id : NP_061253.2

name	2810002G02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249056 GeneID:70118 MGI:1917368
definition	GO_process : GO:0048511 - rhythmic process [Evidence IEA] codon_start : 1 note : SRR1-like product : sensitivity to red light reduced-like protein_id : NP_081599.1

name	Hps4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42476087 CCDS:CCDS19540.1 GeneID:192232 MGI:2177742
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA]; GO:0005764 - lysosome [Evidence ISS]; GO:0042470 - melanosome [Evidence ISS]; GO:0005624 - membrane fraction [Evidence ISS] GO_function : GO:0042803 - protein homodimerization activity [Evidence ISS] GO_process : GO:0007599 - hemostasis [Evidence ISS]; GO:0007040 - lysosome organization and biogenesis [Evidence ISS]; GO:0030318 - melanocyte differentiation [Evidence IMP]; GO:0006996 - organelle organization and biogenesis [Evidence IMP]; GO:0048081 - positive regulation of cuticle pigmentation [Evidence ISS]; GO:0048075 - positive regulation of eye pigmentation [Evidence ISS]; GO:0050821 - protein stabilization [Evidence ISS]; GO:0006605 - protein targeting [Evidence ISS] codon_start : 1 exception : mismatches in translation note : light ear product : Hermansky-Pudlak syndrome 4 homolog protein_id : NP_619587.2

name	EG625424 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85986623 GeneID:625424 MGI:3648511
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC625424 protein_id : NP_001034317.1

name	Asphd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:55926229 CCDS:CCDS19542.1 GeneID:72898 MGI:1920148
definition	GO_component : GO:0030176 - integral to endoplasmic reticulum membrane [Evidence IEA] GO_function : GO:0004597 - peptide-aspartate beta-dioxygenase activity [Evidence IEA] GO_process : GO:0018193 - peptidyl-amino acid modification [Evidence IEA] codon_start : 1 product : aspartate beta-hydroxylase domain containing 2 protein_id : NP_082662.1

name	Sez6l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249082 GeneID:56747 MGI:1935121
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : acupuncture induced gene 1 product : seizure related 6 homolog like protein_id : NP_064366.2

name	EG625464 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94375086 GeneID:625464 MGI:3648937
definition	codon_start : 1 product : hypothetical protein protein_id : XP_899698.2

clone name	MSMg01-126P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439A03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-391H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071H14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-074H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236K14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-091N22.b	B6Ng01-091N22.g
ACC	DH903784	DH903785
length	1,180	999
definition	DH903784\|Mus musculus domesticus DNA, BAC clone: B6Ng01-091N22, 5' end.	DH903785\|Mus musculus domesticus DNA, BAC clone: B6Ng01-091N22, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(111,885,271 - 111,886,455)	(111,736,826 - 111,737,826)
sequence	gaattcagtgtatcttgcacaagggtgaggattagagtcaggtgtgatga ccatctgtaagtcctgtgctcagaagatgaggcagcatcctcagagcaac ctggctagccagactagctaaactggtgagagcaggtgtgaacacgcatg tgcacacacatatgaacatgcatgtatacacacatgtgtacatgcatgtg aacacacaggcacatgtgaacacatatgcacacatgtgaacacacatgtg cacaggtgtgtgaacacacaaaacacacaggcccatttacacacatgtga acacatacataaacacgcatgtgcacacgcaggcacaccacacataacac atatacacaaatgaagaatcctatggaaagaaacaagccccacccacaaa catgccccagacaccgttaacgttgtatttattgttatttaagctgctca gcaaaacatatacacgtatatacagtatgcgtgaatacggaagactcaac tttacatatttaaaaaaaagaaagaaagaaaaataccactcagtttcatg agctattgtcagtcactgtcttccaaccaagcattcagaaatggttttaa gagtcaaaaaaagcttacaggttcgcgcaccgcaccgcagggttaagggt tcatattatacatgtgcaatagcgatttccttctctctactggagttggc tgcggactgattacagtgttcccaggctcctgcgcttcgggcatggtttt cttctacttttattcttcctgctaaaccaaatttaatgacacgatgatgt ccttttgcttaaggctattttaaaagctgctccaccccagggtcgtgggg agtgagcacagataacactggactgagttgataccgggaagtttgctgac agccattagcacactcatccccagccttaagcactgaaaactgtcattct tgtttggggactgaaaggctggcactctcagacagctagctacatgtcac cactctgagagaccgaagcttgaggatgctcctggtggcccatggaggag agaagcattccttcactgcttgggcaccaaaacagaggccctttcttgct ccaccagccataccacctgtgtctggccctctggaccccgatacaacgcc agcacaggtgccgattctgggggctcagga	gaattccaggacagccagggcttcacagagtcttggggaaaaagaaaaag aaccgcaatgtgaagtgaccagttgatggataatcaggatggcacatgga gaactgctgcccttccagactcaagtatggctctgtaactgttaatgttt ctctctgtgtgtctctttttctgtctctctgcttctgcgtctgcctctgc cccccctctaccctgacccctctgtctctctgggttttttgagacaagat atttctctgtatcccagatctttctctgtatcccagatctttttctgtat cccagactagggtgcagaaagaatcaatacagatatacagaaagaaaaaa aaatattcctggagaattctgactcaaagtgatttggtgcaggtgagaat acacagagacacatcacatcagacatggcgagacgaccaacagacccaaa atatgtcacacacaataagggaaccaatgagcctgaaagattaaaacatt ccttttgtgtgtgtgtgtcttttctgtatctaaaagcacagcctcaaatg tatatgactaacaccccccccacacacacacacacagaatgagagtctgt tggcatgcttccttctggtcttatgtgtcaaacacaccaacccaagtcac tgaggagagagagaattgggccaggtcattgataaactctacctggcatt tataggcagaacactgaaacccaaactgaaaaggaaaagatattaaaata cttatggctaattttagttgtcaacttgattacatttgaagccaactaaa acccagactgctaggcatacctgtgagggattttcttaattagatggtct gaggcaggatgacccgctcagtctgggccacagcccacagaaaaggacac agaagaaggaaacttttgctttttgtctgcttgctctcactctctggcaa gtctgtctactctgttgctgcggctggtttaaatcactttctcaagagc
quality values	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr5_111885271_111886455
seq2: B6Ng01-091N22.b_48_1227 (reverse)

seq1  TCCTGAGCCCCCAGGATCTGCACTTGTTGCCTGGGCGTTGTGATGGGGCT  50
      |||||||||||||| ||| |||| || |||   ||||||||   ||||  
seq2  TCCTGAGCCCCCAGAATCGGCACCTG-TGC--TGGCGTTGTATCGGGGTC  47

seq1  CAGAGGG-CAGACACAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCCTC  99
      ||||||| |||||||||||||||| ||||||||||||| ||| || ||||
seq2  CAGAGGGCCAGACACAGGTGGTAT-GGCTGGTGGAGCAAGAAAGGGCCTC  96

seq1  TGTTTT-GTGCCCAAAGCAGTGAAGGGATGGCTTCTCTCCTCCATGGGCC  148
      |||||| |||||| |||||||||||| || ||||||||||||||||||||
seq2  TGTTTTGGTGCCC-AAGCAGTGAAGGAAT-GCTTCTCTCCTCCATGGGCC  144

seq1  A-CAGGAGCATCCTCCAGGCTTCGGTCTCTCAGAGTTGGTGACATGTAGC  197
      | |||||||||||| || ||||||||||||||||| ||||||||||||||
seq2  ACCAGGAGCATCCT-CAAGCTTCGGTCTCTCAGAG-TGGTGACATGTAGC  192

seq1  TAGCTGTCTGAGAGTGCCAGCCTTTCAGTCCCCAAACAAGAATGACAGTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTCTGAGAGTGCCAGCCTTTCAGTCCCCAAACAAGAATGACAGTT  242

seq1  TTCAGTGCTTAAGGCTGGGGATGAGTGTGCTAATGGCTGTCAGCAAACTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGCTTAAGGCTGGGGATGAGTGTGCTAATGGCTGTCAGCAAACTT  292

seq1  CCCGGTATCAACTCAGTCCAGTGTTATCTGTGCTCACTCCCCACGACCCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGTATCAACTCAGTCCAGTGTTATCTGTGCTCACTCCCCACGACCCT  342

seq1  GGGGTGGAGCAGCTTTTAAAATAGCCTTAAGCAAAAGGACATCATCGTGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGAGCAGCTTTTAAAATAGCCTTAAGCAAAAGGACATCATCGTGT  392

seq1  CATTAAATTTGGTTTAGCAGGAAGAATAAAAGTAGAAGAAAACCATGCCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAATTTGGTTTAGCAGGAAGAATAAAAGTAGAAGAAAACCATGCCC  442

seq1  GAAGCGCAGGAGCCTGGGAACACTGTAATCAGTCCGCAGCCAACTCCAGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCGCAGGAGCCTGGGAACACTGTAATCAGTCCGCAGCCAACTCCAGT  492

seq1  AGAGAGAAGGAAATCGCTATTGCACATGTATAATATGAACCCTTAACCCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAAGGAAATCGCTATTGCACATGTATAATATGAACCCTTAACCCT  542

seq1  GCGGTGCGGTGCGCGAACCTGTAAGCTTTTTTTGACTCTTAAAACCATTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTGCGGTGCGCGAACCTGTAAGCTTTTTTTGACTCTTAAAACCATTT  592

seq1  CTGAATGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAG  642

seq1  TGGTATTTTTCTTTCTTTCTTTTTTTTAAATATGTAAAGTTGAGTCTTCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTTTTCTTTCTTTCTTTTTTTTAAATATGTAAAGTTGAGTCTTCC  692

seq1  GTATTCACGCATACTGTATATACGTGTATATGTTTTGCTGAGCAGCTTAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCACGCATACTGTATATACGTGTATATGTTTTGCTGAGCAGCTTAA  742

seq1  ATAACAATAAATACAACGTTAACGGTGTCTGGGGCATGTTTGTGGGTGGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAATAAATACAACGTTAACGGTGTCTGGGGCATGTTTGTGGGTGGG  792

seq1  GCTTGTTTCTTTCCATAGGATTCTTCATTTGTGTATATGTGTTATGTGTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTTCTTTCCATAGGATTCTTCATTTGTGTATATGTGTTATGTGTG  842

seq1  GTGTGCCTGCGTGTGCACATGCGTGTTTATGTATGTGTTCACATGTGTGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCTGCGTGTGCACATGCGTGTTTATGTATGTGTTCACATGTGTGT  892

seq1  AAATGGGCCTGTGTGTTTTGTGTGTTCACACACCTGTGCACATGTGTGTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGCCTGTGTGTTTTGTGTGTTCACACACCTGTGCACATGTGTGTT  942

seq1  CACATGTGTGCATATGTGTTCACATGTGCCTGTGTGTTCACATGCATGTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTGTGCATATGTGTTCACATGTGCCTGTGTGTTCACATGCATGTA  992

seq1  CACATGTGTGTATACATGCATGTTCATATGTGTGTGCACATGCGTGTTCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTGTGTATACATGCATGTTCATATGTGTGTGCACATGCGTGTTCA  1042

seq1  CACCTGCTCTCACCAGTTTAGCTAGTCTGGCTAGCCAGGTTGCTCTGAGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCTCTCACCAGTTTAGCTAGTCTGGCTAGCCAGGTTGCTCTGAGG  1092

seq1  ATGCTGCCTCATCTTCTGAGCACAGGACTTACAGATGGTCATCACACCTG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGCCTCATCTTCTGAGCACAGGACTTACAGATGGTCATCACACCTG  1142

seq1  ACTCTAATCCTCACCCTTGTGCAAGATACACTGAATTC  1185
      ||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAATCCTCACCCTTGTGCAAGATACACTGAATTC  1180

seq1: chr5_111736826_111737826
seq2: B6Ng01-091N22.g_66_1064

seq1  GAATTCCAGGACAGCCAGGGCTTCACAGAGTCTTGGGGAAAAAGAAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTTCACAGAGTCTTGGGGAAAAAGAAAAAG  50

seq1  AACCGCAATGTGAAGTGACCAGTTGATGGATAATCAGGATGGCACATGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGCAATGTGAAGTGACCAGTTGATGGATAATCAGGATGGCACATGGA  100

seq1  GAACTGCTGCCCTTCCAGACTCAAGTATGGCTCTGTAACTGTTAATGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCTGCCCTTCCAGACTCAAGTATGGCTCTGTAACTGTTAATGTTT  150

seq1  CTCTCTGTGTGTCTCTTTTTCTGTCTCTCTGCTTCTGCGTCTGCCTCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGTGTGTCTCTTTTTCTGTCTCTCTGCTTCTGCGTCTGCCTCTGC  200

seq1  CCCCCCTCTACCCTGACCCCTCTGTCTCTCTGGGTTTTTTGAGACAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCTCTACCCTGACCCCTCTGTCTCTCTGGGTTTTTTGAGACAAGAT  250

seq1  ATTTCTCTGTATCCCAGATCTTTCTCTGTATCCCAGATCTTTTTCTGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTGTATCCCAGATCTTTCTCTGTATCCCAGATCTTTTTCTGTAT  300

seq1  CCCAGACTAGGGTGCAGAAAGAATCAATACAGATATACAGAAAGAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGACTAGGGTGCAGAAAGAATCAATACAGATATACAGAAAGAAAAAA  350

seq1  AAATATTCCTGGAGAATTCTGACTCAAAGTGATTTGGTGCAGGTGAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTCCTGGAGAATTCTGACTCAAAGTGATTTGGTGCAGGTGAGAAT  400

seq1  ACACAGAGACACATCACATCAGACATGGCGAGACGACCAACAGACCCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAGACACATCACATCAGACATGGCGAGACGACCAACAGACCCAAA  450

seq1  ATATGTCACACACAATAAGGGAACCAATGAGCCTGAAAGATTAAAACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTCACACACAATAAGGGAACCAATGAGCCTGAAAGATTAAAACATT  500

seq1  CCTTTTGTGTGTGTGTGTCTTTTCTGTATCTAAAAGCACAGCCTCAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGTGTGTGTGTGTCTTTTCTGTATCTAAAAGCACAGCCTCAAATG  550

seq1  TATATGACTAACACCCCCCCCACACACACACACACAGAATGAGAGTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGACTAACACCCCCCCCACACACACACACACAGAATGAGAGTCTGT  600

seq1  TGGCATGCTTCCTTCTGGTCTTATGTGTCAAACACACCAACCCAAGTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGCTTCCTTCTGGTCTTATGTGTCAAACACACCAACCCAAGTCAC  650

seq1  TGAGGAGAGAGAGAATTGGGCCAGGTCATTGATAAACTCTACCTGGCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGAGAGAGAATTGGGCCAGGTCATTGATAAACTCTACCTGGCATT  700

seq1  TATAGGCAGAACACTGAAACCCAAACTGAAAAGGAAAAGATATTAAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGCAGAACACTGAAACCCAAACTGAAAAGGAAAAGATATTAAAATA  750

seq1  CTTATGGCTAATTTTAGTTGTCAACTTGATTACATTTGAAGCCAACTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGGCTAATTTTAGTTGTCAACTTGATTACATTTGAAGCCAACTAAA  800

seq1  ACCCAGACTGCTAGGCATACCTGTGAGGGATTTTCTTAATTAGATGGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGACTGCTAGGCATACCTGTGAGGGATTTTCTTAATTAGATGGTCT  850

seq1  GAGGCAGGATGACCCGCTCAGTCTGGGCCACAGCCCACAGAAAAGGACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGATGACCCGCTCAGTCTGGGCCACAGCCCACAGAAAAGGACAC  900

seq1  AGAAGAAGGAAACTTTTGCTTTTTGTCTGCTTGCTCTCACTCTCTGGCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGGAAACTTTTGCTTTTTGTCTGCTTGCTCTCACTCTCTGGCAA  950

seq1  GTCTGTCTACTCTGTTGCTGCGGCTGGTTTAAATCCAACTTTCTCAAGAG  1000
      |||||||||||||||||||||||||||||||||||  |||||||||||||
seq2  GTCTGTCTACTCTGTTGCTGCGGCTGGTTTAAATC--ACTTTCTCAAGAG  998

seq1  C  1001
      |
seq2  C  999

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information