BAC Information

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BAC

Clone NameB6Ng01-091O15
Chromosome5 (Build37)
Map Location 145,011,244 - 145,153,069
singlet/doubletdoublet
Overlap geneBri3, Baiap2l1
Upstream geneZfp316, Gm792, E130309D02Rik, Zdhhc4, Grid2ip, Kdelr2, LOC231869, LOC670671, Daglb, Rac1, 2810453I06Rik, Pscd3, Usp42, Eif2ak1, 4921520G13Rik, Jtv1, Pms2, 4930526H21Rik, AU022870, Ocm, Lmtk2, Bhlhb8, 2210010N04Rik
Downstream gene4930568B11Rik, Nptx2, EG621967, Tmem130, LOC100039427, Trrap, Smurf1, AW146299, EG231885, EG666992, 1700018F24Rik, Arpc1a, Arpc1b, Pdap1, Bud31, Ptcd1, Cpsf4, Atp5j2, Zkscan14, Zkscan5, EG622116, Zfp655, LOC677270, EG666311, EG622127, LOC100039566
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091O15.bB6Ng01-091O15.g
ACCDH903816DH903817
length1,0671,075
definitionDH903816|Mus musculus domesticus DNA, BAC clone: B6Ng01-091O15, 5' end.DH903817|Mus musculus domesticus DNA, BAC clone: B6Ng01-091O15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(145,152,002 - 145,153,069)(145,011,244 - 145,012,327)
sequence
gaattcttgctagaggtcatattcgtgccctgttcttgaaccagaacttt
ttatagagagaactgtgtgtgtttcattgtgtgaaaaggtgacagtgatt
ttccagattcattccgtgaaaagatttgacatttgtcgcatggctgtaaa
aaaacgcaagcgcttacctgcacaccaatgcctgtcctatttaaactcca
tcccaataagaatgtcaggctctgctgtatctacccaggacgggaaatca
aacctaatttctctcgtggaggataatcttctccttagatggtttcttca
gacctagctcattgtgagggtcacttcatcgtgaactgtgcttccagaag
gcatacccttccctcactggccagcaccagctgccttttcctgtcacctt
cagcagagaataaactgtggtgaccagagctccagactcccaagagctat
gtgtttctatgtgatgatgtcatgctgttaatttggagtcagccatgatg
ggcgtgtccgtgtcacagtggccccctgaatgctaaaggtgggtgtttag
atggggtggtaccgtatcagttcagcagaacacatctgtgacagagtcta
gaatcaccttggagacacacctccgtgagggatgtctctgaggggctttc
tagagttcagtgagggagggggcgctgccctaggtgtgctcagcactgcc
tcattgcctgtggtctcagactacatatgagggagaaagagctgagtacc
cgttttcatctgtctcttgtctgtgaatgcaacatggctgtctgtctcaa
gccactgctaccatcttttccagcactgtaccctcaagctggatttccaa
acaaactctgtggccatttgagtgaggatgccccccacccccgtggttgg
gctcatatatttgaatgaggagtcatcaggagtggagctctttgaaaaga
ttagaaagattaggagggtgtgcccctctttggtggaagtgagctacagg
gggtgggctttgaggttccaaagtcagttttccccccccctttctcttct
ttgcttctttttcttct
gaattctaattttctggagactgctgtttctgtaacagctgacgggagga
cacaggatctttctagagaatcttggctccagctatgccatgacatgggg
cagctggatcttggccacacaagggtgcacacgaggggtcagggatagga
atgtgtgcgtgtccatagcatgtcttatgttgtatgtgttctggcctctt
tagagtcatcccatggaagtaacatcaccaccctccaggtgtttgtaaag
gaacctggcggggcacaggtagctctgttgttgtgtcgtacccccccccc
ccaggattcccggcctttggaccccaggtctaccacctgcagtcctgaga
tcacagcatcctgccctgcaccaagtcactctgtatcaagcttgaaccct
aaatgcaaacaatgactggtggcctttaaagaggagggtgcctagagagc
catgaggagagggctaaagacaccagttctgtgtggcaaggaacctggag
tcactaagttctagaatgacagaaagggtcgtttccaaagcctttggagg
gaatgaggccctgccacacctgctaacttctggtctcctgtgagacagga
cacagagacagtatattgtggggacatgaacagaaataatccctcatcca
ggcccctgcttgcagcctctctccagctaagaagtaaaaattctagcaca
attatccgcatctccttaaggcctttttcccttcccagctgtaacctgaa
attttctaggaatctcccccagaaactccactacagtaaaggtgtgtgct
aaagccctgtgcaaccccagggcttcccagcttcaccttatcagagcatg
gctccatgcaaattacctgcacggtcaccctatggaatcgcttatcaaga
actagccgggtggggggtatggctgctgccatcatgaagcccaggctcac
acacaaactgtggtgtggtgcatggctgtagcccagagcttggcgaggtg
aaggcaaggagattaagaagttcaaggtcatctttgcttacatagaggaa
agcttgtctcgaaatggagaaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_145152002_145153069
seq2: B6Ng01-091O15.b_46_1112 (reverse)

seq1  AGAAGAAGAAGAAG--AAGAAGAAGAAAGAGGGGGGGGAAGACTGAGCTT  48
      ||||||| ||||||  |||||| |||||| |||||||||| |||||   |
seq2  AGAAGAAAAAGAAGCAAAGAAG-AGAAAG-GGGGGGGGAAAACTGA--CT  46

seq1  TTGAAACCTCAAAGCCCACCCCCAGTGACTCACTTCCACC-AAGAGGGCC  97
      ||| ||||||||||||||||||| ||  |||||||||||| ||||||| |
seq2  TTGGAACCTCAAAGCCCACCCCCTGTAGCTCACTTCCACCAAAGAGGGGC  96

seq1  ACA-CCTCCTAATCCTTCTAATCCTTTCAAAGAGCTCCACTCCCTGATGA  146
      ||| |||||||||| |||||||| ||||||||||||||||| ||||||||
seq2  ACACCCTCCTAATCTTTCTAATCTTTTCAAAGAGCTCCACT-CCTGATGA  145

seq1  CTCCTCATTCAAATATATGAGCCCAACCACGGGGGTGGGGGGCATCCTCA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCATTCAAATATATGAGCCCAACCACGGGGGTGGGGGGCATCCTCA  195

seq1  CTCAAATGGCCACAGAGTTTGTTTGGAATTCCAGCTTGAGGGTACAGTGC  246
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTCAAATGGCCACAGAGTTTGTTTGGAAATCCAGCTTGAGGGTACAGTGC  245

seq1  TGGAAAAGATGGTAGCAGTGGCTTGAGACAGACAGCCATGTTGCATTCAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAGATGGTAGCAGTGGCTTGAGACAGACAGCCATGTTGCATTCAC  295

seq1  AGACAAGAGACAGATGAAAACGGGTACTCAGCTCTTTCTCCCTCATATGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGAGACAGATGAAAACGGGTACTCAGCTCTTTCTCCCTCATATGT  345

seq1  AGTCTGAGACCACAGGCAATGAGGCAGTGCTGAGCACACCTAGGGCAGCG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGAGACCACAGGCAATGAGGCAGTGCTGAGCACACCTAGGGCAGCG  395

seq1  CCCCCTCCCTCACTGAACTCTAGAAAGCCCCTCAGAGACATCCCTCACGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCCCTCACTGAACTCTAGAAAGCCCCTCAGAGACATCCCTCACGG  445

seq1  AGGTGTGTCTCCAAGGTGATTCTAGACTCTGTCACAGATGTGTTCTGCTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGTCTCCAAGGTGATTCTAGACTCTGTCACAGATGTGTTCTGCTG  495

seq1  AACTGATACGGTACCACCCCATCTAAACACCCACCTTTAGCATTCAGGGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATACGGTACCACCCCATCTAAACACCCACCTTTAGCATTCAGGGG  545

seq1  GCCACTGTGACACGGACACGCCCATCATGGCTGACTCCAAATTAACAGCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGTGACACGGACACGCCCATCATGGCTGACTCCAAATTAACAGCA  595

seq1  TGACATCATCACATAGAAACACATAGCTCTTGGGAGTCTGGAGCTCTGGT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATCATCACATAGAAACACATAGCTCTTGGGAGTCTGGAGCTCTGGT  645

seq1  CACCACAGTTTATTCTCTGCTGAAGGTGACAGGAAAAGGCAGCTGGTGCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACAGTTTATTCTCTGCTGAAGGTGACAGGAAAAGGCAGCTGGTGCT  695

seq1  GGCCAGTGAGGGAAGGGTATGCCTTCTGGAAGCACAGTTCACGATGAAGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTGAGGGAAGGGTATGCCTTCTGGAAGCACAGTTCACGATGAAGT  745

seq1  GACCCTCACAATGAGCTAGGTCTGAAGAAACCATCTAAGGAGAAGATTAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTCACAATGAGCTAGGTCTGAAGAAACCATCTAAGGAGAAGATTAT  795

seq1  CCTCCACGAGAGAAATTAGGTTTGATTTCCCGTCCTGGGTAGATACAGCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACGAGAGAAATTAGGTTTGATTTCCCGTCCTGGGTAGATACAGCA  845

seq1  GAGCCTGACATTCTTATTGGGATGGAGTTTAAATAGGACAGGCATTGGTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGACATTCTTATTGGGATGGAGTTTAAATAGGACAGGCATTGGTG  895

seq1  TGCAGGTAAGCGCTTGCGTTTTTTTACAGCCATGCGACAAATGTCAAATC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTAAGCGCTTGCGTTTTTTTACAGCCATGCGACAAATGTCAAATC  945

seq1  TTTTCACGGAATGAATCTGGAAAATCACTGTCACCTTTTCACACAATGAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACGGAATGAATCTGGAAAATCACTGTCACCTTTTCACACAATGAA  995

seq1  ACACACACAGTTCTCTCTATAAAAAGTTCTGGTTCAAGAACAGGGCACGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACAGTTCTCTCTATAAAAAGTTCTGGTTCAAGAACAGGGCACGA  1045

seq1  ATATGACCTCTAGCAAGAATTC  1068
      ||||||||||||||||||||||
seq2  ATATGACCTCTAGCAAGAATTC  1067

seq1: chr5_145011244_145012327
seq2: B6Ng01-091O15.g_71_1145

seq1  GAATTCTAATTTTCTGGAGACTGCTGTTTCTGTAACAGCTGACGGGAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATTTTCTGGAGACTGCTGTTTCTGTAACAGCTGACGGGAGGA  50

seq1  CACAGGATCTTTCTAGAGAATCTTGGCTCCAGCTATGCCATGACATGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGATCTTTCTAGAGAATCTTGGCTCCAGCTATGCCATGACATGGGG  100

seq1  CAGCTGGATCTTGGCCACACAAGGGTGCACACGAGGGGTCAGGGATAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGATCTTGGCCACACAAGGGTGCACACGAGGGGTCAGGGATAGGA  150

seq1  ATGTGTGCGTGTCCATAGCATGTCTTATGTTGTATGTGTTCTGGCCTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGCGTGTCCATAGCATGTCTTATGTTGTATGTGTTCTGGCCTCTT  200

seq1  TAGAGTCATCCCATGGAAGTAACATCACCACCCTCCAGGTGTTTGTAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTCATCCCATGGAAGTAACATCACCACCCTCCAGGTGTTTGTAAAG  250

seq1  GAACCTGGCGGGGCACAGGTAGCTCTGTTGTTGTGTCGTACCCCCCCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTGGCGGGGCACAGGTAGCTCTGTTGTTGTGTCGTACCCCCCCCCC  300

seq1  CCAGGATTCCCGGCCTTTGGACCCCAGGTCTACCACCTGCAGTCCTGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGATTCCCGGCCTTTGGACCCCAGGTCTACCACCTGCAGTCCTGAGA  350

seq1  TCACAGCATCCTGCCCTGCACCAAGTCACTCTGTATCAAGCTTGAACCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCATCCTGCCCTGCACCAAGTCACTCTGTATCAAGCTTGAACCCT  400

seq1  AAATGCAAACAATGACTGGTGGCCTTTAAAGAGGAGGGTGCCTAGAGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAAACAATGACTGGTGGCCTTTAAAGAGGAGGGTGCCTAGAGAGC  450

seq1  CATGAGGAGAGGGCTAAAGACACCAGTTCTGTGTGGCAAGGAACCTGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGGAGAGGGCTAAAGACACCAGTTCTGTGTGGCAAGGAACCTGGAG  500

seq1  TCACTAAGTTCTAGAATGACAGAAAGGGTCGTTTCCAAAGCCTTTGGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAAGTTCTAGAATGACAGAAAGGGTCGTTTCCAAAGCCTTTGGAGG  550

seq1  GAATGAGGCCCTGCCACACCTGCTAACTTCTGGTCTCCTGTGAGACAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGGCCCTGCCACACCTGCTAACTTCTGGTCTCCTGTGAGACAGGA  600

seq1  CACAGAGACAGTATATTGTGGGGACATGAACAGAAATAATCCCTCATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGACAGTATATTGTGGGGACATGAACAGAAATAATCCCTCATCCA  650

seq1  GGCCCCTGCTTGCAGCCTCTCTCCAGCTAAGAAGTAAAAATTCTAGCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCTGCTTGCAGCCTCTCTCCAGCTAAGAAGTAAAAATTCTAGCACA  700

seq1  ATTATCCGCATCTCCTTAAGGCCTTTTTCCCTTCCCAGCTGTAACCTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCCGCATCTCCTTAAGGCCTTTTTCCCTTCCCAGCTGTAACCTGAA  750

seq1  ATTTTCTAGGAATCTCCCCCAGAAACTCCACTACAGTAAAAGGTGTGTGC  800
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATTTTCTAGGAATCTCCCCCAGAAACTCCACTACAGT-AAAGGTGTGTGC  799

seq1  TAAAGCCCTGTGCAACCCCAGGGCTTCCCAGCTTCACCTTATCAGAGCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCCTGTGCAACCCCAGGGCTTCCCAGCTTCACCTTATCAGAGCAT  849

seq1  GGCTCCATGCAAATTACCTGCACGGTCACCCTATGGAATCGCTTATCAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCATGCAAATTACCTGCACGGTCACCCTATGGAATCGCTTATCAAG  899

seq1  AACTAGCCGGGT-GGGGGTATGGCTGCTGCCATCATGAAGCCCAGGCTTC  949
      |||||||||||| |||||||||||||||||||||||||||||||||||  
seq2  AACTAGCCGGGTGGGGGGTATGGCTGCTGCCATCATGAAGCCCAGGCT--  947

seq1  AACAC-CACAAACTGT-GTGTGGTGCATGGCTGTAAGCCCAGAGCTT-GC  996
        ||| |||||||||| ||||||||||||||||| |||||||||||| ||
seq2  --CACACACAAACTGTGGTGTGGTGCATGGCTGT-AGCCCAGAGCTTGGC  994

seq1  GAGGTGAAGGC-AGGAGGATTAGAAGTTCAAGGTCATCTTTGCCTACATA  1045
      ||||||||||| |||||  | |||||||||||||||||||||| ||||||
seq2  GAGGTGAAGGCAAGGAGATTAAGAAGTTCAAGGTCATCTTTGCTTACATA  1044

seq1  GAGGGAGAGCTTGTCTCAGAGATGGAGGAGGGGAAGGAA  1084
      || ||| |||||||||| || |||||      |||||||
seq2  GA-GGAAAGCTTGTCTC-GAAATGGA------GAAGGAA  1075