BAC Information

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BAC

Clone NameB6Ng01-093C12
Chromosome5 (Build37)
Map Location 14,782,179 - 14,782,898
singlet/doubletsinglet
Overlap genePclo
Upstream geneSpeer3, EG626067, LOC668085, LOC384149, LOC384148, Sema3e, LOC100042957
Downstream geneENSMUSG00000033219, LOC624245, Speer8-ps1, Speer4c, Speer4d, 4930572O03Rik, Speer7-ps1, 4930519H02Rik, LOC100041781, Cacna2d1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093C12.bB6Ng01-093C12.g
ACCDH904720DH904721
length374720
definitionDH904720|Mus musculus domesticus DNA, BAC clone: B6Ng01-093C12, 5' end.DH904721|Mus musculus domesticus DNA, BAC clone: B6Ng01-093C12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aagaagtttgattctggagaaccaaataatcctattaaaaatggggtact
ctctggattgtccatcttttcatattagctccaaactttgtctctgtatg
atcagtcatctataagatggaacacagggcctccaatggagaagctagag
aaagcacccaaggaactgaaggggtctgcaacaatatgaactaaccagta
accccagagctcttatctctagctgcctatgcagcagaagatagcctagt
tggccacaactgggaagagaggcccctttgaattgcaaactttatatgcc
ccaatacaggagaatgccagggccaagaagcaggagtgggtgggtagggg
agcacggtggagggagggtatagg
gaattctcatcctagccgagaaggtactgctagtaatggctgctgagcaa
cagagagtcagcttttctcaggtatgcgccttgtgaggctacccatctct
aatagatggtcctacatgcatactcatagagggaacactgaatgaactct
ctgtgttaaagaaaacgaaaaaaaaaaaaaacataaatttgggtaagaga
agcatagacaggggaggaattagagaggatggaatgtgatttaatcaaaa
cattctatattcatatacacacatttgaaattcttaaataataaaaatgg
tattagccaggcactggtggtacaagcctttagttccagcacctgggagc
agagggaggtagacctctaaggtcaaggccagcctgatctacagagagag
ttccaggacaaccaggactacacagacaaaccctgtctcaaaaaaaattc
ttttttagttttgtatttgtttattgtggaatgtaatcttaattaaagct
tcctattggcctctattgttggtcgtggcaagcagagatactaccttagc
tgccaagactccaacctattgtttgcctcttagcaaaatttaactgaaga
caggaattgactgcatgtgatggcaagtgtctgtaattccagggctctgg
agctcaggcaataaatactgagaggcagaacatgtttgggggattttatt
tggtttgtttggttggttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_14782179_14782898
seq2: B6Ng01-093C12.g_70_789

seq1  GAATTCTCATCCTAGCCGAGAAGGTACTGCTAGTAATGGCTGCTGAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATCCTAGCCGAGAAGGTACTGCTAGTAATGGCTGCTGAGCAA  50

seq1  CAGAGAGTCAGCTTTTCTCAGGTATGCGCCTTGTGAGGCTACCCATCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGTCAGCTTTTCTCAGGTATGCGCCTTGTGAGGCTACCCATCTCT  100

seq1  AATAGATGGTCCTACATGCATACTCATAGAGGGAACACTGAATGAACTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATGGTCCTACATGCATACTCATAGAGGGAACACTGAATGAACTCT  150

seq1  CTGTGTTAAAGAAAACGAAAAAAAAAAAAAACATAAATTTGGGTAAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTAAAGAAAACGAAAAAAAAAAAAAACATAAATTTGGGTAAGAGA  200

seq1  AGCATAGACAGGGGAGGAATTAGAGAGGATGGAATGTGATTTAATCAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGACAGGGGAGGAATTAGAGAGGATGGAATGTGATTTAATCAAAA  250

seq1  CATTCTATATTCATATACACACATTTGAAATTCTTAAATAATAAAAATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTATATTCATATACACACATTTGAAATTCTTAAATAATAAAAATGG  300

seq1  TATTAGCCAGGCACTGGTGGTACAAGCCTTTAGTTCCAGCACCTGGGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGCCAGGCACTGGTGGTACAAGCCTTTAGTTCCAGCACCTGGGAGC  350

seq1  AGAGGGAGGTAGACCTCTAAGGTCAAGGCCAGCCTGATCTACAGAGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAGGTAGACCTCTAAGGTCAAGGCCAGCCTGATCTACAGAGAGAG  400

seq1  TTCCAGGACAACCAGGACTACACAGACAAACCCTGTCTCAAAAAAAATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGACAACCAGGACTACACAGACAAACCCTGTCTCAAAAAAAATTC  450

seq1  TTTTTTAGTTTTGTATTTGTTTATTGTGGAATGTAATCTTAATTAAAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAGTTTTGTATTTGTTTATTGTGGAATGTAATCTTAATTAAAGCT  500

seq1  TCCTATTGGCCTCTATTGTTGGTCGTGGCAAGCAGAGATACTACCTTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTGGCCTCTATTGTTGGTCGTGGCAAGCAGAGATACTACCTTAGC  550

seq1  TGCCAAGACTCCAACCTATTGTTTGCCTCTTAGCAAAATTTAACTGAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGACTCCAACCTATTGTTTGCCTCTTAGCAAAATTTAACTGAAGA  600

seq1  CAGGAATTGACTGCATGTGATGGCAAGTGTCTGTAATTCCAGGGCTCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATTGACTGCATGTGATGGCAAGTGTCTGTAATTCCAGGGCTCTGG  650

seq1  AGCTCAGGCAATAAATACTGAGAGGCAGAACATGTTTGGGGGATTTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGGCAATAAATACTGAGAGGCAGAACATGTTTGGGGGATTTTATT  700

seq1  TGGTTTGTTTGGTTGGTTGG  720
      ||||||||||||||||||||
seq2  TGGTTTGTTTGGTTGGTTGG  720