BAC Information

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BAC

Clone NameB6Ng01-093E02
Chromosome5 (Build37)
Map Location 14,704,760 - 14,705,430
singlet/doubletsinglet
Overlap genePclo
Upstream geneLOC208055, LOC626053, Speer3, EG626067, LOC668085, LOC384149, LOC384148, Sema3e, LOC100042957
Downstream geneENSMUSG00000033219, LOC624245, Speer8-ps1, Speer4c, Speer4d, 4930572O03Rik, Speer7-ps1, 4930519H02Rik, LOC100041781, Cacna2d1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093E02.bB6Ng01-093E02.g
ACCDH904792DH904793
length1,084671
definitionDH904792|Mus musculus domesticus DNA, BAC clone: B6Ng01-093E02, 5' end.DH904793|Mus musculus domesticus DNA, BAC clone: B6Ng01-093E02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaacttttcagctggggaacggtggataccagtaagtatagct
ttacaaggtacgcctggccttgaactttctaaggaaagtcaagacagtct
atcagaagtaaagtggggaatagctttacaaggtatgcctggccttgaac
tttctaaggaaattcaagacagtctatcagaagtaaagtggaaaatagct
ttacaaggtatgtttggccttaaactttctctagtgttagaagccctttt
gttccttttcacatgttatcaagtgattaaggcagggcgaattctagacg
aaattaaagtcaatctatcagaagtaaagcggggagagagagtaggagca
aagagaaaatatggtacacaaactaagtatacaggcctttccaagggtct
taaacctgaggaaaagtttaggtcaggtaagaatacctggggagagatta
gaaggaaggaaaagaaaaaagatcaatcagcggaggcttctaagagaagg
agcctatactcatcactagatgagctcaaggagccagttgttagtagttc
tgaatcagatgaaaaggctattagggcctggaaggcgctctccggagcag
gtgaagccactggactaacaaagatcgtccagggacctcaggagtcattc
tcagattttgtggccagaatgacagaggcagcagagcgtatttttgcaga
tttggagcaagccgtacccctggtagaatagcttatttatgagcaagcca
cgcaggaatgcagagcggccatagccccaagaaagaacaaaggcttacaa
gactggctcagggtttgtcgggagcttgggggacccctcattatgcgtta
cttccattcagtatgagaaatttactagggcagctaatttgtcaaaaagt
ctttttcagtaatatgttacagaattggatggctgaatttgaacagaccc
ttcgggaattgagactgccatcattcagtcaactccaagcgcttggacct
gtccctgatcaaaggatacccaattggatcctcctcagcattttccttct
taaagaatggatggggggtggggaattatgggga
gaattctatgtggaataattttgttgccatggaattccagtagagaaact
tggagatttagaaaaagtcctctcagagatggcctaatgtagggaaacct
tctagaaagccagtctggtgtagttacgaaattataagacactagatgag
caaaatttgcttcaatttaaagtcaggaacttttgcaaagattactctag
gaaatgtaaatgatcttaccagttgagaggtaactaatatgctgatacaa
gacaaatagttattttctgtacagtaaacaattaatcttgaggattgtat
atgtgattacaacttcctatcattttgttgcttttttagtgacagttaaa
aagaggtgctatgtactctttgcttttctcaaagtgctgtcattgatcat
tatggtttcagaaggatttttgtcttctactgaaacactctaagtaaaat
accaatctaatatctgttataacatatcagagtttttaattgaactctgt
tttggcagtgataataaaatatagcagttgaaaggagaaagaaaaaagaa
acttaatgtggccattaactgcacaaaaagccttaaaaaccatatgtatt
gttttcatgaatgttataaagacatctgaatcaatagaaaggatcggagg
gagtgagagtgggagggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_14704760_14705430
seq2: B6Ng01-093E02.g_66_736

seq1  GAATTCTATGTGGAATAATTTTGTTGCCATGGAATTCCAGTAGAGAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGTGGAATAATTTTGTTGCCATGGAATTCCAGTAGAGAAACT  50

seq1  TGGAGATTTAGAAAAAGTCCTCTCAGAGATGGCCTAATGTAGGGAAACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATTTAGAAAAAGTCCTCTCAGAGATGGCCTAATGTAGGGAAACCT  100

seq1  TCTAGAAAGCCAGTCTGGTGTAGTTACGAAATTATAAGACACTAGATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAAAGCCAGTCTGGTGTAGTTACGAAATTATAAGACACTAGATGAG  150

seq1  CAAAATTTGCTTCAATTTAAAGTCAGGAACTTTTGCAAAGATTACTCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTTGCTTCAATTTAAAGTCAGGAACTTTTGCAAAGATTACTCTAG  200

seq1  GAAATGTAAATGATCTTACCAGTTGAGAGGTAACTAATATGCTGATACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTAAATGATCTTACCAGTTGAGAGGTAACTAATATGCTGATACAA  250

seq1  GACAAATAGTTATTTTCTGTACAGTAAACAATTAATCTTGAGGATTGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATAGTTATTTTCTGTACAGTAAACAATTAATCTTGAGGATTGTAT  300

seq1  ATGTGATTACAACTTCCTATCATTTTGTTGCTTTTTTAGTGACAGTTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATTACAACTTCCTATCATTTTGTTGCTTTTTTAGTGACAGTTAAA  350

seq1  AAGAGGTGCTATGTACTCTTTGCTTTTCTCAAAGTGCTGTCATTGATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGTGCTATGTACTCTTTGCTTTTCTCAAAGTGCTGTCATTGATCAT  400

seq1  TATGGTTTCAGAAGGATTTTTGTCTTCTACTGAAACACTCTAAGTAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTTCAGAAGGATTTTTGTCTTCTACTGAAACACTCTAAGTAAAAT  450

seq1  ACCAATCTAATATCTGTTATAACATATCAGAGTTTTTAATTGAACTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCTAATATCTGTTATAACATATCAGAGTTTTTAATTGAACTCTGT  500

seq1  TTTGGCAGTGATAATAAAATATAGCAGTTGAAAGGAGAAAGAAAAAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCAGTGATAATAAAATATAGCAGTTGAAAGGAGAAAGAAAAAAGAA  550

seq1  ACTTAATGTGGCCATTAACTGCACAAAAAGCCTTAAAAACCATATGTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATGTGGCCATTAACTGCACAAAAAGCCTTAAAAACCATATGTATT  600

seq1  GTTTTCATGAATGTTATAAAGACATCTGAATCAATAGAAAGGATCGGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCATGAATGTTATAAAGACATCTGAATCAATAGAAAGGATCGGAGG  650

seq1  GAGTGAGAGTGGGAGGGAAGG  671
      |||||||||||||||||||||
seq2  GAGTGAGAGTGGGAGGGAAGG  671