BAC Information

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BAC

Clone NameB6Ng01-093F07
Chromosome5 (Build37)
Map Location 95,104,611 - 95,105,699
singlet/doubletsinglet
Overlap geneLOC621203
Upstream geneLOC666075, LOC666077, LOC666081, EG665802, LOC100040408, LOC100040981, EG622719, LOC100041003, BC061212, EG622744, LOC100041032, LOC100041042, LOC624421, AA792892, LOC665521, LOC665551, LOC100041102, LOC665560, LOC100041115, LOC624507
Downstream geneLOC100041153, LOC665499, LOC624698, LOC100041179, LOC624655, LOC100041166, LOC665469, LOC622894, EG666121, LOC666125, EG666133, LOC100041296, LOC100041253, LOC100041264, EG624049, EG666159, LOC666164, EG666169, D5Ertd577e, LOC100041354, LOC100040503, LOC666187, EG622731, LOC100041380
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093F07.bB6Ng01-093F07.g
ACCDH904849DH904850
length1,089776
definitionDH904849|Mus musculus domesticus DNA, BAC clone: B6Ng01-093F07, 5' end.DH904850|Mus musculus domesticus DNA, BAC clone: B6Ng01-093F07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctattaaaaatctagtgtccaggtcttcagtttcatttctttg
atcaacctattttcctgccaacacaatgcagttttcactatactatggct
atgtagtataacttcagatcagaaatggtgatacttctagaacatcatat
attatagaggattatggtcttcaggctcagttcaaaggttgcctgtgagt
gtctgtaattatcttagacaggtgatagcagatcctctcagaggacggcc
atacctggatcctttatgtaagtagatcttgtcattagcaataatgtagg
ggtttgatgtctcctaatgagattgatcccaaaatccctgtgtctggatg
gccctttcttcagttttttgtccctgtttttctgttagacaggaacaatt
ctaggttaaaaattttgagatgtgtgagttgcaccttccctcaactgaaa
gccatgcctatccactgggggtggtctcttcaggttctgtgttccttgta
ttgcatattaagacttgaattttattgtttccttccttggttatttattg
tttgattgatttctttattctcctttttgctcttgaccttcttggtttgg
attgtattctgtgacaacattgttctatagccagggataatttagaattt
caacccatggggatcttcttgccttggccttcttgctggaaggattacta
tgtgagccaagtcacctggatgtgttttcctcattggtgaccagcatggt
tcagagggaaattcacttgggagccataatctgtccttgaaaataaatgt
gcaaaaccataaaatgccattgtaagaggaggacatgacgagtaccttgt
gcagtgcatttggggcctccttgtaggaatttggcaggaatttgacaaag
ggctaggacagtgaagtagctcagatagaatatttactttggggctaata
caatgctcaaggaaactcagcagaggaatatgtggcattagttttacatg
gttcttgataaacccatagaaatattgatcaggggaattattattttttg
tttgtttgtcatagaattttattggagatttattattta
gaattctttgtttggctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatatatattggatattag
tcttctatctggtttaggacaggtaaagatactttcccaatctgttgatg
gtctttttgtcttattgacggtgtcttttgccttacagaagctttgcagt
ttcatgaggtcccatttgtcaattctcgttcttacagcacaagccattgc
tgttctattcaggaattttccccctgtgccaatatcttcgaggcttctct
ccactttcacctctataagtttcagtgtctctggttttatgtggagctcc
ttgatccacttagatttgaccttaggatccatcgcataatcagcctccaa
acactgacaccattgcatacactagcaagattgtgctgatagtaccctga
tataacagtctctagtgagactatgcagggcctagcaaacacataagtgg
atgctcacagtcagctattggacggatcacagggcccccaatggaggagc
tagagaaaatacccaagaagctaaagggatctgcaacccatataggtgga
acaacattatgcactaaccagtaccatggagctcttgactctagctgcat
atgtatcaaaagatggcctagtcggctatcactggaaagagaggcccatt
ggacttgcaaactttatatgcccctgtacaggggaatgccagggccaaaa
agtgggagtgggtgggtagggggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_95104611_95105699
seq2: B6Ng01-093F07.b_56_1135

seq1  ATTAAAAATCTAGTGTCCAGGTCTTCAGTTTCATTTCTTTGATCAACCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAATCTAGTGTCCAGGTCTTCAGTTTCATTTCTTTGATCAACCTA  50

seq1  TTTTCCTGCCAACACAATGCAGTTTTCACTATACTATGGCTATGTAGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGCCAACACAATGCAGTTTTCACTATACTATGGCTATGTAGTAT  100

seq1  AACTTCAGATCAGAAATGGTGATACTTCTAGAACATCATATATTATAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCAGATCAGAAATGGTGATACTTCTAGAACATCATATATTATAGAG  150

seq1  GATTATGGTCTTCAGGCTCAGTTCAAAGGTTGCCTGTGAGTGTCTGTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATGGTCTTCAGGCTCAGTTCAAAGGTTGCCTGTGAGTGTCTGTAAT  200

seq1  TATCTTAGACAGGTGATAGCAGATCCTCTCAGAGGACGGCCATACCTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTAGACAGGTGATAGCAGATCCTCTCAGAGGACGGCCATACCTGGA  250

seq1  TCCTTTATGTAAGTAGATCTTGTCATTAGCAATAATGTAGGGGTTTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTATGTAAGTAGATCTTGTCATTAGCAATAATGTAGGGGTTTGATG  300

seq1  TCTCCTAATGAGATTGATCCCAAAATCCCTGTGTCTGGATGGCCCTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTAATGAGATTGATCCCAAAATCCCTGTGTCTGGATGGCCCTTTCT  350

seq1  TCAGTTTTTTGTCCCTGTTTTTCTGTTAGACAGGAACAATTCTAGGTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTTTTGTCCCTGTTTTTCTGTTAGACAGGAACAATTCTAGGTTAA  400

seq1  AAATTTTGAGATGTGTGAGTTGCACCTTCCCTCAACTGAAAGCCATGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTGAGATGTGTGAGTTGCACCTTCCCTCAACTGAAAGCCATGCCT  450

seq1  ATCCACTGGGGGTGGTCTCTTCAGGTTCTGTGTTCCTTGTATTGCATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTGGGGGTGGTCTCTTCAGGTTCTGTGTTCCTTGTATTGCATATT  500

seq1  AAGACTTGAATTTTATTGTTTCCTTCCTTGGTTATTTATTGTTTGATTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTGAATTTTATTGTTTCCTTCCTTGGTTATTTATTGTTTGATTGA  550

seq1  TTTCTTTATTCTCCTTTTTGCTCTTGACCTTCTTGGTTTGGATTGTATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTATTCTCCTTTTTGCTCTTGACCTTCTTGGTTTGGATTGTATTC  600

seq1  TGTGACAACATTGTTCTATAGCCAGGGATAATTTAGAATTTCAACCCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAACATTGTTCTATAGCCAGGGATAATTTAGAATTTCAACCCATG  650

seq1  GGGATCTTCTTGCCTTGGCCTTCTTGCTGGAAGGATTACTATGTGAGCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCTTCTTGCCTTGGCCTTCTTGCTGGAAGGATTACTATGTGAGCCA  700

seq1  AGTCACCTGGATGTGTTTTCCTCATTGGTGACCAGCATGGTTCAGAGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACCTGGATGTGTTTTCCTCATTGGTGACCAGCATGGTTCAGAGGGA  750

seq1  AATTCACTTGGGAGCCATAATCTGTCCTTGAAAATAAATGTGCAAAACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACTTGGGAGCCATAATCTGTCCTTGAAAATAAATGTGCAAAACCA  800

seq1  TAAAATGCCATTGTAAGAGGAGGACATGACGAGTACCTTGTGCAGTGCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGCCATTGTAAGAGGAGGACATGACGAGTACCTTGTGCAGTGCAT  850

seq1  TTGGGGCCTCCTTGTAGGAATTTGGCAGGAATTTGACAAAGGGCTAGGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGCCTCCTTGTAGGAATTTGGCAGGAATTTGACAAAGGGCTAGGAC  900

seq1  AGTGAAGTAGGCTCAGATAAGAATATTTACTTTGGGGCTAATACAATGCT  950
      ||||||||| |||||||| |||||||||||||||||||||||||||||||
seq2  AGTGAAGTA-GCTCAGAT-AGAATATTTACTTTGGGGCTAATACAATGCT  948

seq1  CAAGGAAAACTCAGCAGAGGAATATGTGGCATTAGTTTTACCATGGTCTC  1000
      ||||| |||||||||||||||||||||||||||||||||| |||||| ||
seq2  CAAGG-AAACTCAGCAGAGGAATATGTGGCATTAGTTTTA-CATGGT-TC  995

seq1  TTGATAAACCCATAGAAATATTGATCAGGGGATATTTATTTATTTTTGTT  1050
      |||||||||||||||||||||||||||||||  | |||||  ||||||||
seq2  TTGATAAACCCATAGAAATATTGATCAGGGG--AATTATTATTTTTTGTT  1043

seq1  TGTTTTTGTCAATAGAATTTTTATTGGATATT--TTATTTA  1089
      ||  |||||| |||||| |||||||||| |||  |||||||
seq2  TG--TTTGTC-ATAGAA-TTTTATTGGAGATTTATTATTTA  1080