BAC Information

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BAC

Clone NameB6Ng01-093G02
Chromosome5 (Build37)
Map Location 8,475,245 - 8,476,414
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667767, EG546855, Steap4, Sri, LOC433840, Adam22, Dbf4, Slc25a40
Downstream geneGm440, Abcb1a, EG330031, Abcb1b, Abcb4, Crot, 4930420K17Rik, Dmtf1, LOC654361, 9330182L06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093G02.bB6Ng01-093G02.g
ACCDH904887DH904888
length1,1441,173
definitionDH904887|Mus musculus domesticus DNA, BAC clone: B6Ng01-093G02, 5' end.DH904888|Mus musculus domesticus DNA, BAC clone: B6Ng01-093G02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctaatatcccaaattagatattttagatgaatctttgatcag
aataaatactattttttttttatcatgctcctgttactcttgttccagca
ggtataatccaatattacacacatttctcttttagaaacatgactgtgct
tttaccgttttcttgatggttacaggtctctaaaagcagcaacagccaag
aggtattttgctgtatctgcatagagtttctgttagcttgagtttgagag
acacagaactaagggatcaaaatagctaagacgtggtttgtccagttgac
ctctaatataacaggctgagtagtcaaaccccggtgtctctctgctggac
aagcagagagtcctgtcactctttagtctaagaacctggatacattagct
ggatacattagctggatactccagctggtgctggaggtctggaagctcct
tgaggagtcactagtgtagagtccacattgaagggtaaaagaagctacag
atactatctacaggatgacggcctgcaatgaagggtgtaactcatcaagg
ataaaagaagatgcatactcatggctattgtagctgctgcttccttctca
tccaaatccctcccacttggactcctccttgacagtgctacccaccttca
atgtaggtgtcccatccctatcattgctcctgtcagtcttttctagaaat
agccttacggacactcagagttgggattttgtactttaatactaaacctc
ttaacctaatccaattgacaactaagcctaaccaccagagggtctatggc
caagaatatgaaaaaagcatagcagaacaggatgaaaatcacgtctgaat
gcataaaatgtttttttccaagggatttaaaagaaaaaatggaactgagt
ctatgatccttaattttgtcatagtttattccagcaattccagtcagtgg
ttgacatagacccttcagctgattcagtatcatgcactgagtcatgctat
gactgatttgagtagtattttcatgaatggatcagtacttcacgagattt
tgggaaattctaccatccaggacactggaaactatgttgttcaatctgca
tcgtcctaaacaacctggagatccaaggtaagattacatctgtt
gaattccattcagattgcatgcataagcgtcaagaggatgaccatgggca
tcttaccagtggttataccactgaagactatgacaccccctcctccaaca
accattaactatcagtagggatctcggagttttcttatgcttgcactgat
cctataaatcatttttgataaactttcatctttataatattaaaacttat
atgcactcaatgaacacaataaatattttcatatattttaataatatctt
ctcagtctcagaaataggcattggtttagaatatataggcattataaatc
tgtatttgtaccgaatgtattcatgtatattggatatatttatattatta
taaacaaatcattatatttttccccattattgctagtatgaaggcataaa
attggtctttaaacattctagcctggaaaatatggtcttcaatagattta
ttggctgagcctatcagattttctacaggtttaaaaagattgatgaaaac
tcaggcatgcatgttttatttcttcatttgtcaatctttatctgttttac
ttcttatctcactacttactatattggctaggatccctaatgcagtgtta
cagaaaacattaaggattttgtgacttctgtgggcgtttgcagcagattt
ttcttatttctctactatttctagattcctgggaattcttatcttaagca
gataccaaatcttttttgtctagcaagattaaacatgatgcccactccta
ttttcttgtccatgtactgaattctgttgtttgactttaaatgtcctact
accatggaataaaacgccattaggtaggtgatgttttttgagatttcttt
gcatacagctgagttaatattgggattttttttttttacatatttactca
ttggagagattggctatactgtcctttctgtcatgtctcatctagtttat
caaggttatctgctgtttgtcatgttctactagttttatagatgatacta
ttcctcatatagaacaattcacaggtagcatctagacaaatttctttggg
gaaataaaaaaattcgtgggcaatataagaatccgtatctgagattaaca
ccgaattcggttttttttacaatcagatttttgagaactgcatgcataat
cgtaagtctgcactgcctcatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_8475245_8476414
seq2: B6Ng01-093G02.b_45_1188

seq1  GAATTCTTCTAATATCCCAAATTAGATATTTTAGATGAATCTTTGATCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTAATATCCCAAATTAGATATTTTAGATGAATCTTTGATCAG  50

seq1  AATAAATACTATTTTTTTTTTATCATGCTCCTGTTACTCTTGTTCCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATACTATTTTTTTTTTATCATGCTCCTGTTACTCTTGTTCCAGCA  100

seq1  GGTATAATCCAATATTACACACATTTCTCTTTTAGAAACATGACTGTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAATCCAATATTACACACATTTCTCTTTTAGAAACATGACTGTGCT  150

seq1  TTTACCGTTTTCTTGATGGTTACAGGTCTCTAAAAGCAGCAACAGCCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCGTTTTCTTGATGGTTACAGGTCTCTAAAAGCAGCAACAGCCAAG  200

seq1  AGGTATTTTGCTGTATCTGCATAGAGTTTCTGTTAGCTTGAGTTTGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTTTGCTGTATCTGCATAGAGTTTCTGTTAGCTTGAGTTTGAGAG  250

seq1  ACACAGAACTAAGGGATCAAAATAGCTAAGACGTGGTTTGTCCAGTTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAACTAAGGGATCAAAATAGCTAAGACGTGGTTTGTCCAGTTGAC  300

seq1  CTCTAATATAACAGGCTGAGTAGTCAAACCCCGGTGTCTCTCTGCTGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATATAACAGGCTGAGTAGTCAAACCCCGGTGTCTCTCTGCTGGAC  350

seq1  AAGCAGAGAGTCCTGTCACTCTTTAGTCTAAGAACCTGGATACATTAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGAGTCCTGTCACTCTTTAGTCTAAGAACCTGGATACATTAGCT  400

seq1  GGATACATTAGCTGGATACTCCAGCTGGTGCTGGAGGTCTGGAAGCTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACATTAGCTGGATACTCCAGCTGGTGCTGGAGGTCTGGAAGCTCCT  450

seq1  TGAGGAGTCACTAGTGTAGAGTCCACATTGAAGGGTAAAAGAAGCTACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGTCACTAGTGTAGAGTCCACATTGAAGGGTAAAAGAAGCTACAG  500

seq1  ATACTATCTACAGGATGACGGCCTGCAATGAAGGGTGTAACTCATCAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTATCTACAGGATGACGGCCTGCAATGAAGGGTGTAACTCATCAAGG  550

seq1  ATAAAAGAAGATGCATACTCATGGCTATTGTAGCTGCTGCTTCCTTCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGAAGATGCATACTCATGGCTATTGTAGCTGCTGCTTCCTTCTCA  600

seq1  TCCAAATCCCTCCCACTTGGACTCCTCCTTGACAGTGCTACCCACCTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATCCCTCCCACTTGGACTCCTCCTTGACAGTGCTACCCACCTTCA  650

seq1  ATGTAGGTGTCCCATCCCTATCATTGCTCCTGTCAGTCTTTTCTAGAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGGTGTCCCATCCCTATCATTGCTCCTGTCAGTCTTTTCTAGAAAT  700

seq1  AGCCTTACGGACACTCAGAGTTGGGATTTTGTACTTTAATACTAAACCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTACGGACACTCAGAGTTGGGATTTTGTACTTTAATACTAAACCTC  750

seq1  TTAACCTAATCCAATTGACAACTAAGCCTAACCACCAGAGGGTCTATGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTAATCCAATTGACAACTAAGCCTAACCACCAGAGGGTCTATGGC  800

seq1  CAAGAATATGAAAAAAGCATAGCAGAACAGGATGAAAATCAGGTCTGAAT  850
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CAAGAATATGAAAAAAGCATAGCAGAACAGGATGAAAATCACGTCTGAAT  850

seq1  GCATAAAATGTTTTTTTCCAAGGGATTTAAAAGAAAAAAATGGAACTGAG  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GCATAAAATGTTTTTTTCCAAGGGATTTAAAAG-AAAAAATGGAACTGAG  899

seq1  TCTATGATTCCTTAATTTTGTCATAGTTTATTCCAGCAATTCCAGTCAGT  950
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGA-TCCTTAATTTTGTCATAGTTTATTCCAGCAATTCCAGTCAGT  948

seq1  GGGTTGACATAGAACCCTTCAGCTGATTCAGTATCATGCAACTGAGTCAT  1000
       ||||||||||| |||||||||||||||||||||||||| ||||||||||
seq2  -GGTTGACATAG-ACCCTTCAGCTGATTCAGTATCATGC-ACTGAGTCAT  995

seq1  GCTATGACTGATTTGAAGTAGTATTTTCATGAATGGATCAGTTACTTCAC  1050
      ||||||||||||||| ||||||||||||||||||||||||| ||||||||
seq2  GCTATGACTGATTTG-AGTAGTATTTTCATGAATGGATCAG-TACTTCAC  1043

seq1  GGAGAATTTTGGGAAATTCTTACCCAATCCCAGGACACTGGAAATCTATG  1100
       ||| |||||||||||||| ||||  || ||||||||||||||| |||||
seq2  -GAG-ATTTTGGGAAATTC-TACC--AT-CCAGGACACTGGAAA-CTATG  1086

seq1  TTTGTTCAAATTCTTGTCATCCTTTCTATAAACCACCTTGAAGATACAAC  1150
       ||||||||  |||   |||| |     ||||| ||| || |||| ||| 
seq2  -TTGTTCAA--TCT--GCATCGT---CCTAAACAACC-TGGAGATCCAA-  1126

seq1  AGTTTAGGATTACATCTGTT  1170
          || |||||||||||||
seq2  --GGTAAGATTACATCTGTT  1144