BAC Information

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BAC

Clone NameB6Ng01-094A16
Chromosome5 (Build37)
Map Location 69,434,711 - 69,564,260
singlet/doubletdoublet
Overlap geneKctd8
Upstream geneAY616753, LOC666996
Downstream geneLOC545756, Yipf7, Guf1, Gnpda2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094A16.bB6Ng01-094A16.g
ACCDH905366DH905367
length1,166952
definitionDH905366|Mus musculus domesticus DNA, BAC clone: B6Ng01-094A16, 5' end.DH905367|Mus musculus domesticus DNA, BAC clone: B6Ng01-094A16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,563,070 - 69,564,260)(69,434,711 - 69,435,591)
sequence
gaattcctcatacaatggaaatgaatacattgtgcagctgccttcattcc
tatgttaccatccacaactccagttgagattcttccacgatacctcgtca
ataataataataataagaagaatattgtgtcatttgcctgtttatgtagt
gttttctgtggctagcagaactatgaatagaaaggtacagtgctggaaat
actgtataaacataatgagttaattgaaagaaatgtatattgtgttctga
atgtgctcaccttgtctaaggtgtgtaaccataggcaccctttttgatct
aattggagaaaatgtatttctagaaatctagcttcagactggttcaagga
agtcacttgtttttatgtgagtggtctgctaattgatttattgctttata
agaaaaaaaaagccaatcaggctgaatttactgctgacatgcagttattg
gaatattgatatttcaacactgatggagctaaacccttgatcacgttctc
ttaataggtttctttgtcacttcactagattatgaaacaaatcttattgt
ttactataaagcattctcattcaaataaatttaaagacagcattatacta
tgaatttttgtttgaaaagtaaaagtacatagaaactatatatttattaa
agcagataccatgcacaatgttcacaatataatagttttttccctcttct
gagatcattttatgaggattctaggaaatatgcacatatctcttctaata
ttgttggtctcatttttctcagcaagctgcatcttgcatattcttcactc
tcagggtattagtgctaatagtttatgtattttggtaattatccatgccc
atctcctatttttgtataacctagaaaagttatatctttaatatttccta
ttttattttattcttaataatttttaacaggtttgatggagcttgaagtc
ataaatataaagcttgttttgtgtatatcatataaagaaagaagcagaga
aagattggcctttatttttttattcaaaagatctggaaaagtaatagtta
taccaaatgtttttctacatagttatcatttatagacattaattcagtca
ggtaactttcatgccctatgtgggaatatggcaatgttaatacatgttaa
ggccattggaagaagg
gaattccagccaggtggtggtggtgcatgcctttaatccaagcacttggt
aggcagaggcaggcagatttctgagttcaaggccagactggtttacaagg
tgagttccaggacagccagggctatacagagaaaccatgtccaaaagaaa
aaaaaaaggaaggaaggaaggaaggaagagagagagagagagagagagag
agagagagagagagagagagagagaaagaaagaaagaaagaaagaaagaa
agaaagaaagaaagaaagaagaagaaaaaagagagaactcaagaagacag
gactcaatacatctggagaaaggagaagggaaagacaataagaaagcaga
atgtggatggaggtcagagagaactgttttctgtaaattaatttttttca
aagtctatttttaaagatggatcttaaatgctttaactttcctcgttagc
ccaccatctgccagaagtagtggaaaagaaaggatgtagggggaagtgga
cctgtttagaaaaattcttggaggaactcttgtctgtgttgtatggaaat
ttgcagttcagttcacaggttagcagtgccagcttgctgatccactcaca
aacatttcatggatacaccagcagtccaattcagcagagctgggatagca
agcaggaattagcagaggtggcactacctaacagagacagtcaggcctca
gactctgcttaagtcagcccaagggacccaggggggacatcacgaaaagt
tctaggctgtgtgtctctcagcgaagcaaagatcagtgacgactcaaaac
ccacaagctttgcacaactaacggtaccagcaagttaagctcaattccat
cactccattgagtcctatatatacactccaaacatcttccactggtctgt
ctcatactgtcttgcctcactaagcatgtctgtctcagctgacatactgt
ca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_69563070_69564260
seq2: B6Ng01-094A16.b_42_1207 (reverse)

seq1  CCTTCTTCATAT-GCCTTAACATGTATTTAACATTTTTGCCATAATCTCC  49
      ||||||||  || ||||||||||||| ||||||   |||||||| || ||
seq2  CCTTCTTCCAATGGCCTTAACATGTA-TTAACA---TTGCCATATTC-CC  45

seq1  ACATTAGGCATGAAAATGTTTACTGAACTTGATATTTTATATGTCTTATT  99
      ||||  |||||||||  |||  ||||   ||| |||    ||||| ||| 
seq2  ACATAGGGCATGAAA--GTTACCTGA--CTGA-ATT---AATGTC-TAT-  85

seq1  ATAATGATAACTTATTGTAGAAAACATTTTTGGTATAACTATTACTTTTC  149
        ||||||||||   ||||||||| |  ||||||||||||||||||||||
seq2  -AAATGATAACT--ATGTAGAAAA-ACATTTGGTATAACTATTACTTTTC  131

seq1  CAGATTCTTTTGAAT-AAAAAATAAAGGCCAATCTTTCTCTGCTTCTTTC  198
      |||| |||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAGA-TCTTTTGAATAAAAAAATAAAGGCCAATCTTTCTCTGCTTCTTTC  180

seq1  TTTATTATGAATAATACAACAAAAACAAGCTTTATATTTATGACCTTCAA  248
      |||| |||||   |||||   |||||||||||||||||||||| ||||||
seq2  TTTA-TATGA--TATACA--CAAAACAAGCTTTATATTTATGA-CTTCAA  224

seq1  GCTCCATCAAACCTGTTAAAAATTATTAAGAATAAAATAAAAATAGGAAA  298
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCTCCATCAAACCTGTTAAAAATTATTAAGAATAAAAT-AAAATAGGAAA  273

seq1  TATTAAAGATATAACTTTTCTAGGTTATACAAAAATAGGAGATGGGCATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAGATATAACTTTTCTAGGTTATACAAAAATAGGAGATGGGCATG  323

seq1  GATAATTACCAAAATACATAAACTATTAGCACTAATACCCTGAGAGTGAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTACCAAAATACATAAACTATTAGCACTAATACCCTGAGAGTGAA  373

seq1  GAATATGCAAGATGCAGCTTGCTGAGAAAAATGAGACCAACAATATTAGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGCAAGATGCAGCTTGCTGAGAAAAATGAGACCAACAATATTAGA  423

seq1  AGAGATATGTGCATATTTCCTAGAATCCTCATAAAATGATCTCAGAAGAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATATGTGCATATTTCCTAGAATCCTCATAAAATGATCTCAGAAGAG  473

seq1  GGAAAAAACTATTATATTGTGAACATTGTGCATGGTATCTGCTTTAATAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAACTATTATATTGTGAACATTGTGCATGGTATCTGCTTTAATAA  523

seq1  ATATATAGTTTCTATGTACTTTTACTTTTCAAACAAAAATTCATAGTATA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAGTTTCTATGTACTTTTACTTTTCAAACAAAAATTCATAGTATA  573

seq1  ATGCTGTCTTTAAATTTATTTGAATGAGAATGCTTTATAGTAAACAATAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTCTTTAAATTTATTTGAATGAGAATGCTTTATAGTAAACAATAA  623

seq1  GATTTGTTTCATAATCTAGTGAAGTGACAAAGAAACCTATTAAGAGAACG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTTTCATAATCTAGTGAAGTGACAAAGAAACCTATTAAGAGAACG  673

seq1  TGATCAAGGGTTTAGCTCCATCAGTGTTGAAATATCAATATTCCAATAAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAAGGGTTTAGCTCCATCAGTGTTGAAATATCAATATTCCAATAAC  723

seq1  TGCATGTCAGCAGTAAATTCAGCCTGATTGGCTTTTTTTTTCTTATAAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTCAGCAGTAAATTCAGCCTGATTGGCTTTTTTTTTCTTATAAAG  773

seq1  CAATAAATCAATTAGCAGACCACTCACATAAAAACAAGTGACTTCCTTGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAATCAATTAGCAGACCACTCACATAAAAACAAGTGACTTCCTTGA  823

seq1  ACCAGTCTGAAGCTAGATTTCTAGAAATACATTTTCTCCAATTAGATCAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTCTGAAGCTAGATTTCTAGAAATACATTTTCTCCAATTAGATCAA  873

seq1  AAAGGGTGCCTATGGTTACACACCTTAGACAAGGTGAGCACATTCAGAAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTGCCTATGGTTACACACCTTAGACAAGGTGAGCACATTCAGAAC  923

seq1  ACAATATACATTTCTTTCAATTAACTCATTATGTTTATACAGTATTTCCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATACATTTCTTTCAATTAACTCATTATGTTTATACAGTATTTCCA  973

seq1  GCACTGTACCTTTCTATTCATAGTTCTGCTAGCCACAGAAAACACTACAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTACCTTTCTATTCATAGTTCTGCTAGCCACAGAAAACACTACAT  1023

seq1  AAACAGGCAAATGACACAATATTCTTCTTATTATTATTATTATTGACGAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGCAAATGACACAATATTCTTCTTATTATTATTATTATTGACGAG  1073

seq1  GTATCGTGGAAGAATCTCAACTGGAGTTGTGGATGGTAACATAGGAATGA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCGTGGAAGAATCTCAACTGGAGTTGTGGATGGTAACATAGGAATGA  1123

seq1  AGGCAGCTGCACAATGTATTCATTTCCATTGTATGAGGAATTC  1191
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCTGCACAATGTATTCATTTCCATTGTATGAGGAATTC  1166

seq1: chr5_69434711_69435591
seq2: B6Ng01-094A16.g_70_948

seq1  GAATTCCAGCCAGGTGGTGGTGGTGCATGCCTTTAATCCAAGCACTTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCCAGGTGGTGGTGGTGCATGCCTTTAATCCAAGCACTTGGT  50

seq1  AGGCAGAGGCAGGCAGATTTCTGAGTTCAAGGCCAGACTGGTTTACAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGGCAGGCAGATTTCTGAGTTCAAGGCCAGACTGGTTTACAAGG  100

seq1  TGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCATGTCCAAAAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCATGTCCAAAAGAAA  150

seq1  AAAAAAAGGAAGGAAGGAAGGAAGGAAGAGAGAGAGAGAGAGAGAGAGAG  200
      ||||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  AAAAAAAGGAAGGAAGGAAGGAAGGA--AGAGAGAGAGAGAGAGAGAGAG  198

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAG  248

seq1  AAAGAAAGAAAGAAAGAAAGAAGAAGAAAAAAGAGAGAACTCAAGAAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAAGAAAGAAGAAGAAAAAAGAGAGAACTCAAGAAGAC  298

seq1  AGGACTCAATACATCTGGAGAAAGGAGAAGGGAAAGACAATAAGAAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTCAATACATCTGGAGAAAGGAGAAGGGAAAGACAATAAGAAAGCA  348

seq1  GAATGTGGATGGAGGTCAGAGAGAACTGTTTTCTGTAAATTAATTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGGATGGAGGTCAGAGAGAACTGTTTTCTGTAAATTAATTTTTTT  398

seq1  CAAAGTCTATTTTTAAAGATGGATCTTAAATGCTTTAACTTTCCTCGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCTATTTTTAAAGATGGATCTTAAATGCTTTAACTTTCCTCGTTA  448

seq1  GCCCACCATCTGCCAGAAGTAGTGGAAAAGAAAGGATGTAGGGGGAAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACCATCTGCCAGAAGTAGTGGAAAAGAAAGGATGTAGGGGGAAGTG  498

seq1  GACCTGTTTAGAAAAATTCTTGGAGGAACTCTTGTCTGTGTTGTATGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGTTTAGAAAAATTCTTGGAGGAACTCTTGTCTGTGTTGTATGGAA  548

seq1  ATTTGCAGTTCAGTTCACAGGTTAGCAGTGCCAGCTTGCTGATCCACTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCAGTTCAGTTCACAGGTTAGCAGTGCCAGCTTGCTGATCCACTCA  598

seq1  CAAACATTTCATGGATACACCAGCAGTCCAATTCAGCAGAGCTGGGATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATTTCATGGATACACCAGCAGTCCAATTCAGCAGAGCTGGGATAG  648

seq1  CAAGCAGGAATTAGCAGAGGTGGCACTACCTAACAGAGACAGTCAGGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGGAATTAGCAGAGGTGGCACTACCTAACAGAGACAGTCAGGCCT  698

seq1  CAGACTCTGCTTAAGTCAGCCCAAGGGACCCAGGGGGGACATCAGGAAAA  750
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CAGACTCTGCTTAAGTCAGCCCAAGGGACCCAGGGGGGACATCACGAAAA  748

seq1  GTTCTAGGCTGTGTGTCTCTCAGCGAAGCAAAGATCAGTGACGACTCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAGGCTGTGTGTCTCTCAGCGAAGCAAAGATCAGTGACGACTCAAA  798

seq1  ACCCACAAGCTTTGCACAACTAACGGTACCAGCAAGTTAAGCTCAATTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACAAGCTTTGCACAACTAACGGTACCAGCAAGTTAAGCTCAATTCC  848

seq1  ATCACTCCATTGAGTCCTATATATACACTCC  881
      |||||||||||||||||||||||||||||||
seq2  ATCACTCCATTGAGTCCTATATATACACTCC  879