BAC Information

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BAC

Clone NameB6Ng01-094F14
Chromosome5 (Build37)
Map Location 6,629,271 - 6,808,528
singlet/doubletdoublet
Overlap geneEG435830
Upstream geneA330021E22Rik, Steap2, Steap1, LOC727711, LOC546854, LOC100041208
Downstream geneLOC100042651, 4921511H03Rik, LOC242823
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094F14.bB6Ng01-094F14.g
ACCDH905597DH905598
length942982
definitionDH905597|Mus musculus domesticus DNA, BAC clone: B6Ng01-094F14, 5' end.DH905598|Mus musculus domesticus DNA, BAC clone: B6Ng01-094F14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,629,271 - 6,630,121)(6,807,851 - 6,808,528)
sequence
gaattcaagaacacatcaaaatgataattcaccaaataggcttcatccta
gggatgcaggggtagttcaatataaggaaatcattcatcaatgcaataca
ccatataaacaaattcaaaaaaagagaaacacatgatcatctcattagat
gctgaaaaagcctttgacaaaacataataccacttcatgttaaaagtctt
gaaaagtacagaaattcaaggttcataaaccaaacaaaataaaagcaata
tacagcaaaccaataaccaacagcaaaccaatagccaacatcaaactaaa
tggagagaaatttgaaggaatctctattgtggatgggcctggttctgttc
tttttttttttttccattttttattaggtatttagctcatttacatttcc
aatgctataccaaaagtcccccatacccacccactcccaatcccctaccc
acccactccccctttttggccttggcgttcccctgtattggggcatataa
agtttgcgtgtccaatgggcctctctttccagtgatggccgactaggcca
tcttttgatacatatgcagctagagtcaagagctccagggtactggttag
ttcataatgttgtttcatctatagggttgcagatccctttagctccttgg
ctactttctctagctcctccattgggagccctgtgatccatccattagct
gactgtgagcatccacttctgtgtttgctaggccccggcatagtctcaga
agagacagctacatctgggtcctttcgataaaatcttgctagtgtatgca
atggtgtcagcgtttggatgctgattatggggtggatccctggatatgga
agtctctacatggaccatcctttcatctcagctccaaactttgtctctgt
aactccttccaagggtgtttgttcccacttctaagaagggca

gaattcacaaatgtagaatctgtggatttagccaacttagtattattagg
acactttggaaaatactcaaagtcacccaagtgatttagctggaatatga
agagagtctgttaattttttttttcacataacaaaatcaggatcacattc
acatctgagatcaaagaacatctactcagtacctgaaggttattcaagaa
ggtgacactcagaaggaaggaggaggctggtatacaatttgaagtaaatg
ctaggtcaatcctaatatttcaagatgacaccacagcaaattttattttg
gaagcattattaaaattatatataattgtttattgaaccactggcctgat
atttgattgcttgtaattatttgttattataatacatatagtaaatatga
atattaacaatctgaggttgtaactttaacttttttaaatcttattgtta
gtgataatttttaaatgctttaacctctcttgtggctcaccacccaccag
aggtagtagaaaggaaagaatactgggaggtggacctgtttagaaaggtt
ctttgaagcaactcccttctgtgttgtctagaaatcagcagttcagttca
caggtgagcaggcaacagcatctccatctacacgcaaacaactcacagat
acaccagcagtctggttctgcagagtcgggttagcaacagtggtggcctg
acctagtagggacaaccgggcctcagcctcagctctagtcaacaggaggg
acctagtagggacaaccaggcctcagcctcagctctagtcaacaggaggg
acctggagggacagcagaagttccaagttgtgcctctttcatggaagcta
agatcaatgaagatgcaagatagtgttgcacagctagcttgccagcagag
aggcttagtctcattactccatggagtctatttacactctcaaacatcac
atgtctctacatgctgctcagcatggcttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_6629271_6630121
seq2: B6Ng01-094F14.b_46_896

seq1  GAATTCAAGAACACATCAAAATGATAATTCACCAAATAGGCTTCATCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAACACATCAAAATGATAATTCACCAAATAGGCTTCATCCTA  50

seq1  GGGATGCAGGGGTAGTTCAATATAAGGAAATCATTCATCAATGCAATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCAGGGGTAGTTCAATATAAGGAAATCATTCATCAATGCAATACA  100

seq1  CCATATAAACAAATTCAAAAAAAGAGAAACACATGATCATCTCATTAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATAAACAAATTCAAAAAAAGAGAAACACATGATCATCTCATTAGAT  150

seq1  GCTGAAAAAGCCTTTGACAAAACATAATACCACTTCATGTTAAAAGTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAAAAGCCTTTGACAAAACATAATACCACTTCATGTTAAAAGTCTT  200

seq1  GAAAAGTACAGAAATTCAAGGTTCATAAACCAAACAAAATAAAAGCAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTACAGAAATTCAAGGTTCATAAACCAAACAAAATAAAAGCAATA  250

seq1  TACAGCAAACCAATAACCAACAGCAAACCAATAGCCAACATCAAACTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCAAACCAATAACCAACAGCAAACCAATAGCCAACATCAAACTAAA  300

seq1  TGGAGAGAAATTTGAAGGAATCTCTATTGTGGATGGGCCTGGTTCTGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGAAATTTGAAGGAATCTCTATTGTGGATGGGCCTGGTTCTGTTC  350

seq1  TTTTTTTTTTTTTCCATTTTTTATTAGGTATTTAGCTCATTTACATTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTCCATTTTTTATTAGGTATTTAGCTCATTTACATTTCC  400

seq1  AATGCTATACCAAAAGTCCCCCATACCCACCCACTCCCAATCCCCTACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTATACCAAAAGTCCCCCATACCCACCCACTCCCAATCCCCTACCC  450

seq1  ACCCACTCCCCCTTTTTGGCCTTGGCGTTCCCCTGTATTGGGGCATATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTCCCCCTTTTTGGCCTTGGCGTTCCCCTGTATTGGGGCATATAA  500

seq1  AGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCA  550

seq1  TCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCAGGGTACTGGTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCAGGGTACTGGTTAG  600

seq1  TTCATAATGTTGTTTCATCTATAGGGTTGCAGATCCCTTTAGCTCCTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAATGTTGTTTCATCTATAGGGTTGCAGATCCCTTTAGCTCCTTGG  650

seq1  CTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCATCCATTAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCATCCATTAGCT  700

seq1  GACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCAGA  750

seq1  AGAGACAGCTACATCTGGGTCCTTTCGATAAAATCTTGCTAGTGTATGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGCTACATCTGGGTCCTTTCGATAAAATCTTGCTAGTGTATGCA  800

seq1  ATGGTGTCAGCGTTTGGATGCTGATTATGGGGTGGATCCCTGGATATGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGTCAGCGTTTGGATGCTGATTATGGGGTGGATCCCTGGATATGGA  850

seq1  A  851
      |
seq2  A  851


seq1: chr5_6807851_6808528
seq2: B6Ng01-094F14.g_68_745 (reverse)

seq1  CGACTCTGCAGAACCAGACTGCTGGTGTATCTGTGAGTTGTTTGCGTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTCTGCAGAACCAGACTGCTGGTGTATCTGTGAGTTGTTTGCGTGTA  50

seq1  GATGGAGATGCTGTTGCCTGCTCACCTGTGAACTGAACTGCTGATTTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGATGCTGTTGCCTGCTCACCTGTGAACTGAACTGCTGATTTCTA  100

seq1  GACAACACAGAAGGGAGTTGCTTCAAAGAACCTTTCTAAACAGGTCCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACACAGAAGGGAGTTGCTTCAAAGAACCTTTCTAAACAGGTCCACC  150

seq1  TCCCAGTATTCTTTCCTTTCTACTACCTCTGGTGGGTGGTGAGCCACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTATTCTTTCCTTTCTACTACCTCTGGTGGGTGGTGAGCCACAAG  200

seq1  AGAGGTTAAAGCATTTAAAAATTATCACTAACAATAAGATTTAAAAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTTAAAGCATTTAAAAATTATCACTAACAATAAGATTTAAAAAAGT  250

seq1  TAAAGTTACAACCTCAGATTGTTAATATTCATATTTACTATATGTATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTACAACCTCAGATTGTTAATATTCATATTTACTATATGTATTAT  300

seq1  AATAACAAATAATTACAAGCAATCAAATATCAGGCCAGTGGTTCAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAAATAATTACAAGCAATCAAATATCAGGCCAGTGGTTCAATAAA  350

seq1  CAATTATATATAATTTTAATAATGCTTCCAAAATAAAATTTGCTGTGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATATATAATTTTAATAATGCTTCCAAAATAAAATTTGCTGTGGTG  400

seq1  TCATCTTGAAATATTAGGATTGACCTAGCATTTACTTCAAATTGTATACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTGAAATATTAGGATTGACCTAGCATTTACTTCAAATTGTATACC  450

seq1  AGCCTCCTCCTTCCTTCTGAGTGTCACCTTCTTGAATAACCTTCAGGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCTCCTTCCTTCTGAGTGTCACCTTCTTGAATAACCTTCAGGTAC  500

seq1  TGAGTAGATGTTCTTTGATCTCAGATGTGAATGTGATCCTGATTTTGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAGATGTTCTTTGATCTCAGATGTGAATGTGATCCTGATTTTGTTA  550

seq1  TGTGAAAAAAAAAATTAACAGACTCTCTTCATATTCCAGCTAAATCACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAAAAAAAATTAACAGACTCTCTTCATATTCCAGCTAAATCACTT  600

seq1  GGGTGACTTTGAGTATTTTCCAAAGTGTCCTAATAATACTAAGTTGGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGACTTTGAGTATTTTCCAAAGTGTCCTAATAATACTAAGTTGGCTA  650

seq1  AATCCACAGATTCTACATTTGTGAATTC  678
      ||||||||||||||||||||||||||||
seq2  AATCCACAGATTCTACATTTGTGAATTC  678


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