BAC Information

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BAC

Clone NameB6Ng01-094H19
Chromosome5 (Build37)
Map Location 88,201,981 - 88,202,615
singlet/doubletsinglet
Overlap genenone
Upstream geneA730098D12Rik, LOC622056, Ugt2b34, Ugt2b1, LOC665424, LOC545767, Ugt2b35, Ugt2b36, LOC665440, Ugt2b5, LOC435848, Ugt2b37, LOC665468, Ugt2a3, LOC665476, LOC665483, LOC665494, LOC100039818, Ugt2b38, Ugt2a2, Ugt2a1, Sult1b1, Sult1d1, Sult1e1, Csn1s1, Csn2
Downstream geneCsn1s2a, Csn1s2b, 4930432K09Rik, EG654494, Odam, BC037156, Csn3, BC051076, 2310003L06Rik, 4931407G18Rik, Smr1, EG665603, Smr2, LOC100039941, LOC630942, EG665615, Muc10, Amtn, LOC100039963, EG665631, Ambn, Enam, Igj, Crlz1, Rufy3, Grsf1, Mobkl1a, Dck
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094H19.b
ACCDH905697
length867
definitionDH905697|Mus musculus domesticus DNA, BAC clone: B6Ng01-094H19, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcagaaaatggtaaatattaatactccacttaaggtcagttt
aaaagttccacatgagatataaaatagcccacaaatatcgtacaagaata
attccttccattacctcaagtctatttctttaaatacttagttaaaaaaa
tgaacaaaattttgaccagtgtatgttgatacatgggtattgattcaaca
aaccattaaatatattctggggattgtgcacacattgaatgaagccacaa
gcaaaaattttaggcttaataatatagatatgacaaatggaagtgagaca
taagagcatacatttttatctccattaaatttggtcgtgacatgttctac
agagaaaactgacttggaataaagagatgggaagtttttggaagttttgg
aaacttgaggacagggatggtgattccacaagaaggttttttgttttgtt
tgtttgtttgtttgtttgtttgtttgtttattgtagccattttgccctac
tgatagtgtcctttgctttacagaagctttgcaatttttgaggtcacatt
tgtcaattcttgatgtgagagcataagccattgttgttctgttcaggaaa
ttttcccttgtgcccatgttctcaaggttcttccccactttctcctctat
tagtttcagtgtatctagttttatgtggaggtccttggtcggcttggact
tgagctgtgtacaaggagataagaatggatctatttgcattcttctacat
gctaacttccagttgaaccagcatcttttgttgaaaatgcttttttccac
tgggtggttttagcttgtttgtcaagatcaagtgactataggtctgtggg
ttcatttctggatcttc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_88201981_88202615
seq2: B6Ng01-094H19.b_41_676 (reverse)

seq1  GGGGAAGAACCTTGAGAACATGGGCACAAGGGAAAATTTCCTGAACAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGAACCTTGAGAACATGGGCACAAGGGAAAATTTCCTGAACAGAA  50

seq1  CAACAATGGCTTATGCTCTCACATCAAGAATTGACAAATGTGACCTCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAATGGCTTATGCTCTCACATCAAGAATTGACAAATGTGACCTCAAA  100

seq1  AATTGCAAAGCTTCTGTAAAGCAAAGGACACTATCAGTAGGGCAAAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCAAAGCTTCTGTAAAGCAAAGGACACTATCAGTAGGGCAAAATGG  150

seq1  CTACAATAAACAAACAAACAAACAAACAAACAAACAAACAAAACAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAATAAACAAACAAACAAACAAACAAACAAACAAACAAAACAAAAAA  200

seq1  CCTTCTTGTGGAATCACCATCCCTGTCCTCAAGTTTCCAAAACTTCCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTGTGGAATCACCATCCCTGTCCTCAAGTTTCCAAAACTTCCAAA  250

seq1  AACTTCCCATCTCTTTATTCCAAGTCAGTTTTCTCTGTAGAACATGTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCCATCTCTTTATTCCAAGTCAGTTTTCTCTGTAGAACATGTCAC  300

seq1  GACCAAATCTAATGGAGATAAAAATGTATGCTCTTATGTCTCACTTCCAT  350
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAATTTAATGGAGATAAAAATGTATGCTCTTATGTCTCACTTCCAT  350

seq1  TTGTCATATCTATATTATTAAGCCTAAAATTTTTGCTTGTGGCTTCATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATATCTATATTATTAAGCCTAAAATTTTTGCTTGTGGCTTCATTC  400

seq1  AATGTGTGCACAATCCCCAGAATATATTTAATGGTTTGTTGAATCAATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTGCACAATCCCCAGAATATATTTAATGGTTTGTTGAATCAATAC  450

seq1  CCATGTATCAACATACACTGGTCAAAATTTTGTTCATTCTTTTAACTAAG  500
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCATGTATCAACATACACTGGTCAAAATTTTGTTCATTTTTTTAACTAAG  500

seq1  TATTTAAAGAAATAGACTTGAGGTAATGGAAGGAATTATTTTTGTACGAT  550
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TATTTAAAGAAATAGACTTGAGGTAATGGAAGGAATTATTCTTGTACGAT  550

seq1  ATTTGTGGGCTATTTTATATCTC-TGTGGAACTTTTAAACTGACCTTAAG  599
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATTTGTGGGCTATTTTATATCTCATGTGGAACTTTTAAACTGACCTTAAG  600

seq1  TGGAGTATTAATATTTACCATTTTCTGAGAGAATTC  635
      ||||||||||||||||||||||||||||||||||||
seq2  TGGAGTATTAATATTTACCATTTTCTGAGAGAATTC  636