BAC Information

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BAC

Clone NameB6Ng01-094K19
Chromosome10 (Build37)5 (Build37)
Map Location 53,601,360 - 53,602,41611,329,841 - 11,329,962
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSlc35f1, Pln, EG432460, Mcm9, Asf1a, LOC100042554, 4930589M24Rik
Downstream geneMan1a, LOC100041898
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094K19.bB6Ng01-094K19.g
ACCDH905832DH905833
length1,105173
definitionDH905832|Mus musculus domesticus DNA, BAC clone: B6Ng01-094K19, 5' end.DH905833|Mus musculus domesticus DNA, BAC clone: B6Ng01-094K19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(53,601,360 - 53,602,416)(11,329,841 - 11,329,962)
sequence
gaattctttgttcaattcttaagaagtgttatgaggatgctgaagtgtag
ctctccaagattgacggcttctggtcagtgtgcggaagagaatggtaact
cggttcagttctaagtaagtatcagtccattgagagtttaactatgctcc
actgagaatatagctaacacaaattggacttgggggagttgttctttttt
ttttctttttgagggggagacagatcacaggggttagggtgggcactgaa
gggataggaaatgagtgtgaccaaagtgcatggtgtgaaactcccgaaga
atcaataaaaatattatgctttttcaaaaaagtagcaagtactcttagcc
actgaggcatcacttaagcacctaaggtctcagttttaaatgtcagtgaa
aataatgataccgatattcgcaatcttcactttttatgacatgtcttcac
atatattgtttcacttattcattttagtgaggttatagatcctgtatgtg
tgtgtgtgtgtgtgtgaaagaaacacatgtgtatgtttgaaaataagcac
tgattacagtgtacaatgattacggtatacttctgaagtacaccacagag
aatttataaggaccatacacttctaccatggtattacttcttccttgaag
tgataaaattccctaacaaaggcagtttgagacagaaaaggtttgtcttt
ggcttaaagttctagagagagactatacaccatggtaaaagaaaagaaag
agaagtaggctggaaaggcatgggtagcaagagcctgagtatggcttgtc
acgttgcaaccatgctcaggaaacagtatcaacaggaagtagggccagtc
tattaaacctctcagctcattcctagtgatcatctccacctcctgaaagt
tcaaaatcatccaaaatgccaccaacaactgggaaccagaattcaatgac
cccagagactcatttcaaactcaaatacaaccccagtgtagatgaggatt
tataacaaaggtttgttggagaaagtctggaaagtgaggcttgccttagg
aaattcttcagagaatggagcaaacttgaactgacttcttatagaggaat
ctgct
tttgtttagctctgagccccatttttaatggggttatttgattttctgga
gtccacattctttagttctttatatatatatatatatatatatatatata
tatatatatatatatatatatatatatatatatatatatatatatatata
tatatatatatatatatatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_53601360_53602416
seq2: B6Ng01-094K19.b_103_1152 (reverse)

seq1  AGCAGATTCCTCCTTTAAG-AGTCTGATTCAAGTTTTGCTTCCTTATTCT  49
      ||||||||||| || |||| |||| | |||||| |||||| |   |||||
seq2  AGCAGATTCCT-CTATAAGAAGTCAG-TTCAAG-TTTGCTCC---ATTCT  44

seq1  -TGAAGAATTACTTATG--CAGCCTCACTTTCACAGACCTTCTCC-ACAG  95
       ||||||||| | || |   |||||||||||| ||||| |||||| ||| 
seq2  CTGAAGAATTTCCTAAGGCAAGCCTCACTTTC-CAGACTTTCTCCAACAA  93

seq1  ACCTTTGTTATAATTCCCTCATCTGACACTGGGGGTTGTATTTTGAGTTT  145
      ||||||||||||| | |||||||| ||||| ||||||||| |||||||||
seq2  ACCTTTGTTATAAAT-CCTCATCT-ACACT-GGGGTTGTA-TTTGAGTTT  139

seq1  GAAATGAGTCTCTTGGGGTCATTTGAATTCTTGGTTCCCAGTTGTTGGTG  195
      |||||||||||| |||||||| |||||||| |||||||||||||||||||
seq2  GAAATGAGTCTC-TGGGGTCA-TTGAATTC-TGGTTCCCAGTTGTTGGTG  186

seq1  GCATTTTGGATGATTTTGGAACCTTCAGGAGGTGGAGATGATCACTAGGA  245
      ||||||||||||||||| |||| |||||||||||||||||||||||||||
seq2  GCATTTTGGATGATTTT-GAACTTTCAGGAGGTGGAGATGATCACTAGGA  235

seq1  ATGAGCTGAGAGGTTTAATAGACTGGCCCTACTTCCTGTTGATACTGTTT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTGAGAGGTTTAATAGACTGGCCCTACTTCCTGTTGATACTGTTT  285

seq1  CCTGAGCATGGTTGCAACGTGACAAGCCATACTCAGGCTCTTGCTA-CCA  344
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCTGAGCATGGTTGCAACGTGACAAGCCATACTCAGGCTCTTGCTACCCA  335

seq1  TGCCTTTCCAGCCTACTTCTCTTTCTTTTC-TTTACCATGGTGTATAGTC  393
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGCCTTTCCAGCCTACTTCTCTTTCTTTTCTTTTACCATGGTGTATAGTC  385

seq1  TCTCTCTAGAACTTTAAGCC-AAGACAAACCTTTTCTGTCTCAAACTGCC  442
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCTCTCTAGAACTTTAAGCCAAAGACAAACCTTTTCTGTCTCAAACTGCC  435

seq1  TTTGTTAGGGAATTTTATCACTTCAAGGAAGAAGTAATACCATGGTAGAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTAGGGAATTTTATCACTTCAAGGAAGAAGTAATACCATGGTAGAA  485

seq1  GTGTATGGTCCTTATAAATTCTCTGTGGTGTACTTCAGAAGTATACCGTA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGGTCCTTATAAATTCTCTGTGGTGTACTTCAGAAGTATACCGTA  535

seq1  ATCATTGTACACTGTAATCAGTGCTTATTTTCAAACATACACATGTGTTT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGTACACTGTAATCAGTGCTTATTTTCAAACATACACATGTGTTT  585

seq1  CTTTCACACACACACACACACACATACAGGATCTATAACCTCACTAAAAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACACACACACACACACACATACAGGATCTATAACCTCACTAAAAT  635

seq1  GAATAAGTGAAACAATATATGTGAAGACATGTCATAAAAAGTGAAGATTG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAGTGAAACAATATATGTGAAGACATGTCATAAAAAGTGAAGATTG  685

seq1  CGAATATCGGTATCATTATTTTCACTGACATTTAAAACTGAGACCTTAGG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATATCGGTATCATTATTTTCACTGACATTTAAAACTGAGACCTTAGG  735

seq1  TGCTTAAGTGATGCCTCAGTGGCTAAGAGTACTTGCTACTTTTTTGAAAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAAGTGATGCCTCAGTGGCTAAGAGTACTTGCTACTTTTTTGAAAA  785

seq1  AGCATAATATTTTTATTGATTCTTCGGGAGTTTCACACCATGCACTTTGG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAATATTTTTATTGATTCTTCGGGAGTTTCACACCATGCACTTTGG  835

seq1  TCACACTCATTTCCTATCCCTTCAGTGCCCACCCTAACCCCTGTGATCTG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACTCATTTCCTATCCCTTCAGTGCCCACCCTAACCCCTGTGATCTG  885

seq1  TCTCCCCCTCAAAAAGAAAAAAAAAAGAACAACTCCCCCAAGTCCAATTT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCCTCAAAAAGAAAAAAAAAAGAACAACTCCCCCAAGTCCAATTT  935

seq1  GTGTTAGCTATATTCTCAGTGGAGCATAGTTAAACTCTCAATGGACTGAT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAGCTATATTCTCAGTGGAGCATAGTTAAACTCTCAATGGACTGAT  985

seq1  ACTTACTTAGAACTGAACCGAGTTACCATTCTCTTCCGCACACTGACCAG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACTTAGAACTGAACCGAGTTACCATTCTCTTCCGCACACTGACCAG  1035

seq1  AAGCCGTCAATCTTG  1057
      |||||||||||||||
seq2  AAGCCGTCAATCTTG  1050

seq1: chr5_11329841_11329962
seq2: B6Ng01-094K19.g_139_245 (reverse)

seq1  ATATATATACAATATATAAGTCATATATATATAAGTCATATATATGCATA  50
      ||||||||   ||||||     ||||||||||     ||||||||  |||
seq2  ATATATAT---ATATAT-----ATATATATAT-----ATATATAT--ATA  35

seq1  TATGTATATATGTATATATATATATATATATATATATATATATATATATA  100
      ||| ||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATATATATATATATATATATATATA  85

seq1  TATATATATATATATATAAAGA  122
      ||||||||||||||||||||||
seq2  TATATATATATATATATAAAGA  107