BAC Information

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BAC

Clone NameB6Ng01-094K21
Chromosome5 (Build37)
Map Location 134,596,324 - 134,694,995
singlet/doubletdoublet
Overlap geneGats, Wbscr16, Gtf2ird2
Upstream geneLOC100039731, LOC666038, LOC100039750
Downstream geneNcf1, Gtf2i, LOC630424, Gtf2ird1, LOC100039820, Clip2, EG666071, Gm52, Rfc2, Lat2, Eif4h, LOC638081, Limk1, Eln, Wbscr28, Cldn13, Wbscr27, Cldn4, Cldn3, Abhd11, Stx1a, Wbscr22, Wbscr18, Vps37d, Mlxipl, Tbl2, Bcl7b, LOC100040069, Baz1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094K21.bB6Ng01-094K21.g
ACCDH905836DH905837
length728648
definitionDH905836|Mus musculus domesticus DNA, BAC clone: B6Ng01-094K21, 5' end.DH905837|Mus musculus domesticus DNA, BAC clone: B6Ng01-094K21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,596,324 - 134,597,051)(134,694,349 - 134,694,995)
sequence
gaattctgagcctggagaagtggttcagaggctaagcggaccctcctttg
ccccagcacccacgttgggcagctcacaactgcctgtagccccagcatta
gggaatcccgtaccctcttctggtctttgtggtcacctgcattcaacaag
catagacacacacacaaacaaactcataattacaaataaaataaatcttt
ttctttttttaatggagcaatagctcatagcatttgctgttctttgacag
gtctcagcacctacacagcagttagagccatccatacctctagcaccagg
agatccgatgccctcttctgacatccttgggcagcgggcatatacgggct
acacatacacgtgcagacaaaacactacacaccaaatcaatgtctctaaa
tattatttggagaaaacttgagccctgggaggggaagaggccaggggtga
agtgatagtttgtgagggaagtgattctttaaaacaaggcacatggctgt
aggggtttgagagggaccctcagtagatacctggagcatagaaactgtgt
taaaccgagcatggtagaacacagcttaatcccagcactcagtaggcaaa
ggcatgtggaatcactctgagttcaaggccagcctagtctatagagcaag
ttccagaacagccagggctacacagagaaagcctgtctaggggtagggtg
ggtgtttagagggctggatgggtaggga
gaattctctcagcagaccaagctggccttgaactaaaaaaatctacctgc
ctttgcccctgagtgctgggattaaaggcgtgcctggctagttgggccat
attttaaggtgtgtaaactggatgcactccagttagatgggtttgccctc
tgagttggatttgtctgggccattcccctccctgcctccatcctttgact
ggaagacatcaatgcctggcctgaagaaacagcaaccaattaagaatgag
ctcccagtcccgtctctttcccatttatctggccacataactccacagac
atcttgttgccatggttactgaagaacaccccatatcccatcttctctat
ggtggcagtacttgttagcccccacggggtccaaaatcacattccagggt
agagaaggaatctgcagtggatgtcatgaagtgttcctgtaatcccagat
cagtggaggccgaggcaggaagagctgggtttctagaccagcctcgtttg
cataacgagatcctgtcttggaggagggatgagagggtaagagggagaaa
ggaggacagagaagaagagaggaaggagagaggaagaggaggatggtaga
gaaaagtggtgggagaaaagaagagaaaggaaacggaaggaagaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_134596324_134597051
seq2: B6Ng01-094K21.b_50_777

seq1  GAATTCTGAGCCTGGAGAAGTGGTTCAGAGGCTAAGCGGACCCTCCTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGCCTGGAGAAGTGGTTCAGAGGCTAAGCGGACCCTCCTTTG  50

seq1  CCCCAGCACCCACGTTGGGCAGCTCACAACTGCCTGTAGCCCCAGCATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCACCCACGTTGGGCAGCTCACAACTGCCTGTAGCCCCAGCATTA  100

seq1  GGGAATCCCGTACCCTCTTCTGGTCTTTGTGGTCACCTGCATTCAACAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATCCCGTACCCTCTTCTGGTCTTTGTGGTCACCTGCATTCAACAAG  150

seq1  CATAGACACACACACAAACAAACTCATAATTACAAATAAAATAAATCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGACACACACACAAACAAACTCATAATTACAAATAAAATAAATCTTT  200

seq1  TTCTTTTTTTAATGGAGCAATAGCTCATAGCATTTGCTGTTCTTTGACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTAATGGAGCAATAGCTCATAGCATTTGCTGTTCTTTGACAG  250

seq1  GTCTCAGCACCTACACAGCAGTTAGAGCCATCCATACCTCTAGCACCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGCACCTACACAGCAGTTAGAGCCATCCATACCTCTAGCACCAGG  300

seq1  AGATCCGATGCCCTCTTCTGACATCCTTGGGCAGCGGGCATATACGGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCGATGCCCTCTTCTGACATCCTTGGGCAGCGGGCATATACGGGCT  350

seq1  ACACATACACGTGCAGACAAAACACTACACACCAAATCAATGTCTCTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACACGTGCAGACAAAACACTACACACCAAATCAATGTCTCTAAA  400

seq1  TATTATTTGGAGAAAACTTGAGCCCTGGGAGGGGAAGAGGCCAGGGGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTGGAGAAAACTTGAGCCCTGGGAGGGGAAGAGGCCAGGGGTGA  450

seq1  AGTGATAGTTTGTGAGGGAAGTGATTCTTTAAAACAAGGCACATGGCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATAGTTTGTGAGGGAAGTGATTCTTTAAAACAAGGCACATGGCTGT  500

seq1  AGGGGTTTGAGAGGGACCCTCAGTAGATACCTGGAGCATAGAAACTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTTGAGAGGGACCCTCAGTAGATACCTGGAGCATAGAAACTGTGT  550

seq1  TAAACCGAGCATGGTAGAACACAGCTTAATCCCAGCACTCAGTAGGCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCGAGCATGGTAGAACACAGCTTAATCCCAGCACTCAGTAGGCAAA  600

seq1  GGCATGTGGAATCACTCTGAGTTCAAGGCCAGCCTAGTCTATAGAGCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTGGAATCACTCTGAGTTCAAGGCCAGCCTAGTCTATAGAGCAAG  650

seq1  TTCCAGAACAGCCAGGGCTACACAGAGAAAGCCTGTCTAGGGGTAGGGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAACAGCCAGGGCTACACAGAGAAAGCCTGTCTAGGGGTAGGGTG  700

seq1  GGTGTTTAGAGGGCTGGATGGGTAGGGA  728
      ||||||||||||||||||||||||||||
seq2  GGTGTTTAGAGGGCTGGATGGGTAGGGA  728

seq1: chr5_134694349_134694995
seq2: B6Ng01-094K21.g_67_714 (reverse)

seq1  TCCCTCTTCCTTCCGTTTCCCTTCTCTTC-TTTCTCCCTCCTCTTTTCTC  49
      |||||||||||||||||||| |||||||| |||||||| || ||||||||
seq2  TCCCTCTTCCTTCCGTTTCCTTTCTCTTCTTTTCTCCCACCACTTTTCTC  50

seq1  TTCCCTCCTCCTCTTCCTCTCTCCTTCCTCTCTTCTTCTCTGTCCTCCTT  99
      | || |||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATCCTCCTCTTCCTCTCTCCTTCCTCTCTTCTTCTCTGTCCTCCTT  100

seq1  TCTCCCTCTTACCCTCTCATCCCTCCTCCAAGACAGGATCTCGTTATGCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCTTACCCTCTCATCCCTCCTCCAAGACAGGATCTCGTTATGCA  150

seq1  AACGAGGCTGGTCTAGAAACCCAGCTCTTCCTGCCTCGGCCTCCACTGAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAGGCTGGTCTAGAAACCCAGCTCTTCCTGCCTCGGCCTCCACTGAT  200

seq1  CTGGGATTACAGGAACACTTCATGACATCCACTGCAGATTCCTTCTCTAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTACAGGAACACTTCATGACATCCACTGCAGATTCCTTCTCTAC  250

seq1  CCTGGAATGTGATTTTGGACCCCGTGGGGGCTAACAAGTACTGCCACCAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAATGTGATTTTGGACCCCGTGGGGGCTAACAAGTACTGCCACCAT  300

seq1  AGAGAAGATGGGATATGGGGTGTTCTTCAGTAACCATGGCAACAAGATGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGATGGGATATGGGGTGTTCTTCAGTAACCATGGCAACAAGATGT  350

seq1  CTGTGGAGTTATGTGGCCAGATAAATGGGAAAGAGACGGGACTGGGAGCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGAGTTATGTGGCCAGATAAATGGGAAAGAGACGGGACTGGGAGCT  400

seq1  CATTCTTAATTGGTTGCTGTTTCTTCAGGCCAGGCATTGATGTCTTCCAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTAATTGGTTGCTGTTTCTTCAGGCCAGGCATTGATGTCTTCCAG  450

seq1  TCAAAGGATGGAGGCAGGGAGGGGAATGGCCCAGACAAATCCAACTCAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGATGGAGGCAGGGAGGGGAATGGCCCAGACAAATCCAACTCAGA  500

seq1  GGGCAAACCCATCTAACTGGAGTGCATCCAGTTTACACACCTTAAAATAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAACCCATCTAACTGGAGTGCATCCAGTTTACACACCTTAAAATAT  550

seq1  GGCCCAACTAGCCAGGCACGCCTTTAATCCCAGCACTCAGGGGCAAAGGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAACTAGCCAGGCACGCCTTTAATCCCAGCACTCAGGGGCAAAGGC  600

seq1  AGGTAGATTTTTTTAGTTCAAGGCCAGCTTGGTCTGCTGAGAGAATTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGATTTTTTTAGTTCAAGGCCAGCTTGGTCTGCTGAGAGAATTC  648