BAC Information

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BAC

Clone NameB6Ng01-097G23
Chromosome5 (Build37)
Map Location 125,069,230 - 125,069,470
singlet/doubletsinglet
Overlap gene4432405B04Rik
Upstream geneClip1, Zcchc8, Rsrc2, Kntc1, LOC100040005, Gpr109a, Gpr81, Denr, Ccdc62, Hip1r, Vps37b, Abcb9, Ogfod2, Arl6ip4, Pitpnm2, Mphosph9, 2810006K23Rik, Cdk2ap1, Sbno1, Setd8, BC003324, LOC606492, 6330548G22Rik, 2900002H16Rik, Rpl32-ps5c, Tmed2, Ddx55, Eif2b1, Gtf2h3
Downstream geneAtp6v0a2, Atp6v0a2, Dnahc10, Ccdc92, Zfp664, 3110032G18Rik, Ncor2, Scarb1, Ubc, Dhx37, Bri3bp, Aacs, Tmem132b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097G23.bB6Ng01-097G23.g
ACCDH907813DH907814
length645241
definitionDH907813|Mus musculus domesticus DNA, BAC clone: B6Ng01-097G23, 5' end.DH907814|Mus musculus domesticus DNA, BAC clone: B6Ng01-097G23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcagttttgcagggaaattccttagaggcaggaaggtaaacaactcaaaa
aaaagcttcttcaggaagtgcctgaaactgaccagattcactaggtccct
gccagagtaagcgataaaagctgagaatccctctgagacaaactgcaaag
aagaccctgagaaccagtcttgctccctggaagaggcttccagacgctaa
ctgagggaccaggaaaggacactctccagtctgttgttctcccagctgac
tgccgcagtgtgctcccggttcccagcttttgtgagctgtcacccatgct
gggatgaatcttggtgttgcagctgtctgagtcatttctgctcccataag
taatccctccccccatactcctgtaagtaaccccaggaaaactcatggtt
caccaagttggatggactttggtggtatctgtattttggtctgctgggga
gtccctatctgaggtgagtagacgtgtgttccatctccccaggaaaagta
tggtcacacaacaccgccctgagtgctttagattattaactgttggatgg
aagtgggagtaaaacaaaccctttcttccccaaggtgcttttgctctcag
catttcatcctagcaatagaaggccaactaagttcggggtggtgg
ctggaccaggcgctgggggcttcctgtaagccggatgttgctgcttcagg
caggtgtgggcaactcctactgccatgctgggtgccctctgttcagaggg
agctgttttggctccaaggaatagcatgatgggctatggccacagacagc
acaaccctgcctgaaaagctcttacaaatacccagcactttaggtacaac
acgcaaggcatccttgaaaaaggggggacgggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_125069230_125069470
seq2: B6Ng01-097G23.g_73_313 (reverse)

seq1  CCCCCCCCCCCCGTCCCCCCTTTTTCAAGGATGCCTTGCGTGTTGTACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCGTCCCCCCTTTTTCAAGGATGCCTTGCGTGTTGTACCT  50

seq1  AAAGTGCTGGGTATTTGTAAGAGCTTTTCAGGCAGGGTTGTGCTGTCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCTGGGTATTTGTAAGAGCTTTTCAGGCAGGGTTGTGCTGTCTGT  100

seq1  GGCCATAGCCCATCATGCTATTCCTTGGAGCCAAAACAGCTCCCTCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATAGCCCATCATGCTATTCCTTGGAGCCAAAACAGCTCCCTCTGAA  150

seq1  CAGAGGGCACCCAGCATGGCAGTAGGAGTTGCCCACACCTGCCTGAAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGCACCCAGCATGGCAGTAGGAGTTGCCCACACCTGCCTGAAGCA  200

seq1  GCAACATCCGGCTTACAGGAAGCCCCCAGCGCCTGGTCCAG  241
      |||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATCCGGCTTACAGGAAGCCCCCAGCGCCTGGTCCAG  241