BAC Information

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BAC

Clone NameB6Ng01-097I14
Chromosome5 (Build37)
Map Location 110,383,351 - 110,383,715
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041615, V2r16, LOC545792, EG384219, Vmn2r12, LOC231589, EG231591, LOC667128, EG211223, EG384220, EG636052, EG384221, LOC667159, LOC667171, Tpte2, EG667185, LOC671695, LOC636173, LOC624831, LOC100041734, LOC100042749, LOC667198, 4930522L14Rik
Downstream geneLOC667243, Plcxd1, Gtpbp6, LOC675812, Chfr, Golga3, D5Ertd585e, Pgam5, Pxmp2, Pole, P2rx2, Gm1679, 2410025L10Rik, Galnt9, Noc4l, Ddx51, Ep400, Pus1, Ulk1, Hscb, Chek2, Ttc28
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097I14.bB6Ng01-097I14.g
ACCDH907889DH907890
length1,014448
definitionDH907889|Mus musculus domesticus DNA, BAC clone: B6Ng01-097I14, 5' end.DH907890|Mus musculus domesticus DNA, BAC clone: B6Ng01-097I14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcccttgtggtttctgttcagcactgttccagccatctatgtt
tgccagagtaagagccccagtgagggaggaaactgtgagagtgcattgaa
tgaacctgagagaatgaagcctgagttgcattttgagaccacaagatgtt
gagatacctaagctatgagacacccgccatggagagctgcatataaagag
tgcaagtaactaaacagagatgtatgagaagtttcatggataggtcggtc
tatgccttttgaaactgaggccccttgtgtctgagatagagttacatggt
gtggtgtttgtcctgctgcgtatcctcccttggtccacacttccctcact
atgtacacattcctctctattggaaatggaaggggcattctgtgcttttg
tatgtaatataataacttgacttttgattttacaagatgtaacaatcaag
aatgtcagaagagtgcatggagagatgcctcaacagttcagagaactggc
tgcttactctttcagaggtcctgagttcaattctcagcaaccacatggtg
gctcacaaccatctgtaatgagatctgatgccctcttctggcgtttctga
agacagctacagtgtacttatatgaatgaaataaataaagcttgggaaaa
aaaaaaaaaaaaaaacagtgtcctaagagacattgctacttttgaagaat
gcatgggctgctgcagactgttagggtcattgaagttaaactgtgtacat
ttcaacatggatgaccatgatcagaatgtagttgtttgagtgaaaaagct
cacagatagggtgatgtctttgaacacttgtttctttttgtggatttctt
tgggagagcttagaatgttagggtccaagaatcacttaaggaagaacccc
caactcaagtagtatacaaaatcgctttattctgtagaattctatcatgc
agggtttaccattcactagatggaggagacacttagctttgcagctctat
ttaagacaatttgg
ttcaccccaattcagcaggaagcaactttacaaagatcattcattgccct
agttccttaagttggggtggataggtttggtcatttgatgtgttatattt
gttatcatttaggatggaagattattattggttatgatcagggagtgata
aaatttaaagtctttttgttagaattattgtatagtaatagaaatttaag
ttttttattatatgttaatagaactttaaggttttgtttgaattattgta
tattaatagaaacacaaagttgtttttaattgttgtacattgatggaaat
ttaaggtttttcttttaattattgtatattgagaggaatttaaatttttg
tttaattattgtatattgatagaagtttaaaattgttttgtctgaagtat
tttatattgatagaaatttaaggttgtttcgttagattatttgactat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_110383351_110383715
seq2: B6Ng01-097I14.b_576_955

seq1  AATTCCCAGCAACCACAAGGTGGCTCACAACCATCTGTATTGCGATCAGA  50
      ||||| ||||||||||| ||||||||||||||||||||| || |||| ||
seq2  AATTCTCAGCAACCACATGGTGGCTCACAACCATCTGTAATGAGATCTGA  50

seq1  TGCCCTATCCTGGTGTGTATAAAGACAGCTACAGTGTATTCATATGAATG  100
      |||||| | |||| || | | ||||||||||||||||| | |||||||||
seq2  TGCCCTCTTCTGGCGTTTCTGAAGACAGCTACAGTGTACTTATATGAATG  100

seq1  AAATAAATAAACCTTG-------------AAAAAAAAAAGTCTCATAAGA  137
      ||||||||||| ||||             |||||||| ||| || |||||
seq2  AAATAAATAAAGCTTGGGAAAAAAAAAAAAAAAAAAACAGTGTCCTAAGA  150

seq1  GACATTG-GACATTTGAAGAATGTATGGACTGCTGCAGACTATTAGGGTC  186
      |||||||  || ||||||||||| |||| |||||||||||| ||||||||
seq2  GACATTGCTACTTTTGAAGAATGCATGGGCTGCTGCAGACTGTTAGGGTC  200

seq1  ATTAAAGTTAAACTGTGTGCATTTTCAGCATGGATGACCATGACCAGAAT  236
      ||| |||||||||||||| || ||||| ||||||||||||||| ||||||
seq2  ATTGAAGTTAAACTGTGTACA-TTTCAACATGGATGACCATGATCAGAAT  249

seq1  GTAGTTGATTGAGTGAAAAAGGTCACAGATAGGGTGATGTCTTTGAACAT  286
      ||||||| ||||||||||||| ||||||||||||||||||||||||||| 
seq2  GTAGTTGTTTGAGTGAAAAAGCTCACAGATAGGGTGATGTCTTTGAACAC  299

seq1  TTGTTTCTTTTTGTGGCTTTCTTTGGGAGAGCTTATAATGTTAGGGTCCA  336
      |||||||||||||||| |||||||||||||||||| ||||||||||||||
seq2  TTGTTTCTTTTTGTGGATTTCTTTGGGAGAGCTTAGAATGTTAGGGTCCA  349

seq1  AGAATCACTGAAGGAAG--CCCCCAACTCAA  365
      ||||||||| |||||||  ||||||||||||
seq2  AGAATCACTTAAGGAAGAACCCCCAACTCAA  380