BAC Information

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BAC

Clone NameB6Ng01-100K14
Chromosome5 (Build37)
Map Location 58,846,654 - 58,847,107
singlet/doubletsinglet
Overlap geneLOC100041385
Upstream geneLOC625721, EG666465, Pcdh7
Downstream geneLOC100041396, LOC666499, EG625870, LOC100041425
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100K14.bB6Ng01-100K14.g
ACCDH910093DH910094
length923448
definitionDH910093|Mus musculus domesticus DNA, BAC clone: B6Ng01-100K14, 5' end.DH910094|Mus musculus domesticus DNA, BAC clone: B6Ng01-100K14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctggtctttccaagacttttatcatgaactgatgttggatttgg
tcaaatgatttctcagcatctaacaagatgatcatgtggttttggtcttt
gggtttgtttatatagtggattatgttgatggatctccctttattaaacc
atcactgcatccctgggatgaagcttacttgatcatgatagatgattgtt
ttgatgtgttcttggatttgatttgctagtattttattgagtatttttgc
atcaatattcataagggaaattggtctgaagttctctttctttgttggat
ccctatgtggtttatgtatcagcataattgtgactttgtagaatgaattg
ggtagagtatcttctctttctattttgcggaacagtttgaagagaattag
aatcaggtcttttttgaaggtctgatagaactccacactaaacacatctg
atactgtttttgttttgttttgttttgttttggtttggttgggagactat
taatgactgcttctatttctttaagggaaattggactgtttagatcatta
atctggtcctgatttaattttggtaccaggtaggaaattgtccatttcat
ccaggttttccagttttgttgagtatagccttttgtactaggatctgatg
atgttttggatttcctcaggatctgctgttatatctcccttttcacttat
gattttgttaattaggatactgcccctgtgccctctagttagtttggtta
agggtttgtctatcttgctgattttcacaaagaaccagctcctggtttgg
ttaattctttggatagttctttttgtttcacttggttgatttaagaacct
aagtttgatatttcctgctgtctactcctcttgggggatttgcttccttt
ttgtttagggcttctaggggtgc
accttcatttttaggtttgtaaatcatcaaaggtcatttgaaactctact
tctgctgcacctggatttcagtaaggattcatggaactaagattgtcagt
gagacaaattcaaggatgcaacttggaaactcttattacagtgttctgaa
tggtgcattgaacataccccttcactgtgtagtcttgtctgagtcaacaa
ctcccaacatttgtgtcaagcattaggtgagtctgttgtgtcagtgtgta
ataccagaatattacagctcatgagatgcttttcatgatgtctttactcc
agaaacctcttcctagaggacacaaccagtggcataaactagtcagaaat
tgctcagagataagaaaaacctcagagggtacatgtatttgaaaatgtta
agagctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_58846654_58847107
seq2: B6Ng01-100K14.g_68_521 (reverse)

seq1  ACACACACACACACACACACACACACACACACACACACACAGAGCTCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACAGAGCTCTTA  50

seq1  ACATTTTCAAATACATGTACCCTCTGAGGTTTTTCTTATCTCTGAGCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCAAATACATGTACCCTCTGAGGTTTTTCTTATCTCTGAGCAAT  100

seq1  TTCTGACTAGTTTATGCCACTGGTTGTGTCCTCTAGGAAGAGGTTTCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACTAGTTTATGCCACTGGTTGTGTCCTCTAGGAAGAGGTTTCTGG  150

seq1  AGTAAAGACATCATGAAAAGCATCTCATGAGCTGTAATATTCTGGTATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGACATCATGAAAAGCATCTCATGAGCTGTAATATTCTGGTATTA  200

seq1  CACACTGACACAACAGACTCACCTAATGCTTGACACAAATGTTGGGAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGACACAACAGACTCACCTAATGCTTGACACAAATGTTGGGAGTT  250

seq1  GTTGACTCAGACAAGACTACACAGTGAAGGGGTATGTTCAATGCACCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACTCAGACAAGACTACACAGTGAAGGGGTATGTTCAATGCACCATT  300

seq1  CAGAACACTGTAATAAGAGTTTCCAAGTTGCATCCTTGAATTTGTCTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACACTGTAATAAGAGTTTCCAAGTTGCATCCTTGAATTTGTCTCAC  350

seq1  TGACAATCTTAGTTCCATGAATCCTTACTGAAATCCAGGTGCAGCAGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATCTTAGTTCCATGAATCCTTACTGAAATCCAGGTGCAGCAGAAG  400

seq1  TAGAGTTTCAAATGACCTTTGATGATTTACAAACCTAAAAATGAAGGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTTTCAAATGACCTTTGATGATTTACAAACCTAAAAATGAAGGTGA  450

seq1  ATTC  454
      ||||
seq2  ATTC  454