BAC Information

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BAC

Clone NameB6Ng01-101A12
Chromosome5 (Build37)
Map Location 12,927,955 - 12,928,865
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC384144, LOC100041626, EG668059, Sema3d, LOC668015, LOC100042917, LOC668069
Downstream geneLOC433845, LOC625989, LOC670717, Sema3a, LOC208055, LOC626053, Speer3, EG626067, LOC668085, LOC384149, LOC384148
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101A12.bB6Ng01-101A12.g
ACCDH910344DH910345
length1,264910
definitionDH910344|Mus musculus domesticus DNA, BAC clone: B6Ng01-101A12, 5' end.DH910345|Mus musculus domesticus DNA, BAC clone: B6Ng01-101A12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattctatgaaaccacaattatgcttataactaaaccacacaaag
aacaaacaaagaaagagaacttctgaccaatttcccttatgaacattgat
gcaaaactattcaattaaattttgataagagaatccaaaaacacaccaaa
atgatcattcaccacggtcaggtagacttcatcctacagatgcaaggatg
cttcaatatatacaaatccattaatgtaatacactatataaacaaaatca
aaggtaaaaaaccacatgatcatcttagtaaatgctcagaaatcatttga
ataaattctacagaccttcatggtaaaagtcttggaatgatcagaaattc
aaggcccatacttaaacataaaaaaaaaagtgatatacatcaaaccagta
gccaacattaaactaaatagagagaaatttgaagtaatcccactaaaatc
agggagtagacaaagctgcccactctctcgatatctactgaatatagtac
ctgaagttctagatagagcaattagacaacaaaaggaggttgaagtgata
aaaaaaatagtagtaaaaatagccatcttgccaaaagcaatctacagact
caatgcatgtggaaaaatgcaaattgtcccatttttatctcctgtacaaa
gctcaagtccaagtggatcaaggacctccaaacaaaaccaaatacactga
aacttattgaggacaaagtcagtaagagccttgaacacatgggcacaggg
gaaattttcctgaacagaacaccaatggcttatgctctaggatcaagaat
caacaaatggaacttcataaaatttcaatgcaatagaacaaaacagcaat
cagaagattgggaaagatctttaccaaccctacgtctgatagagggctaa
tatccaatatatacaaagaactcaacgagttagaatccagagaatcaaat
aaccctattaaaattttcactgaggaatactgaatggcccagaagcaata
agaaatggtcaacatccttaataaccaggaaatgccagaaagattttgtg
acagaccctgataaactatttcatattgagctatgccgttgccttgcaat
acagaagtggatgctcagtcatctatggatgaacaagacctatgaagaat
acagagaaagttatccaagcttaagtctgcacctatggagaacacattga
cttaagatctcctaagctggctctagttcaatgtcccaaagaattcctga
atggtctcatatag
gaattcaaaatgaatgagcagaggcttgttcaattgaataacaaaagaga
atccaaacatttttctaaaatttgttttatttaaacttaaaattatttag
cagttcagccatgaaaatcgtttataagtaccatagaattatttttaaat
atcttttttctgcttagcctagtgttcaaaattgagttaacttctggaat
gatctcaattcttagctaaaaaactacaaataaattgattcaggagatgt
ctccaaacattccttttttacttactttagtccatactaagagtaagctg
taatgttaatactgtttttgtcttccctttttccataatttgtgatttta
ttttatatatatagaaatagtatttgagcagagtaacttattctggtttt
caccatgattggggtagactggaattggttttatagttaaggaaagttat
atgcattctagtttccatggatctatgggatgtctgacatcctctgcatc
atgtggtcagtgtatgcactggaggtcgaacagtgaagtagagaaattgt
tttctttcttgaaagttatgttcttttgagtattaggcagaaaaaaaaaa
cgtgatcatactgaataaggagcatagtatagggttgtttcatttaaaaa
tgtagagttggtgtgaaattaggaaaattcaagaggaaataagcctggta
caagatgtagaaaatttaaacatggaggcatcattgtagtggatttggcc
taatgctgcttgtaacctatgttaattttgatcccaaaaattgcttgcac
gaatatcttcatgtagtgtaattagttagactgctttgtgcactttgtgc
tctcaactgcttgcacatgcacacaagacaaaagcttatctggattcact
taatctacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_12927955_12928865
seq2: B6Ng01-101A12.g_69_978

seq1  GAATTCAAAATGAATGAGCAGAGGCTTGTTCAATTGAATAACAAAAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATGAATGAGCAGAGGCTTGTTCAATTGAATAACAAAAGAGA  50

seq1  ATCCAAACATTTTTCTAAAATTTGTTTTATTTAAACTTAAAATTATTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAACATTTTTCTAAAATTTGTTTTATTTAAACTTAAAATTATTTAG  100

seq1  CAGTTCAGCCATGAAAATCGTTTATAAGTACCATAGAATTATTTTTAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCAGCCATGAAAATCGTTTATAAGTACCATAGAATTATTTTTAAAT  150

seq1  ATCTTTTTTCTGCTTAGCCTAGTGTTCAAAATTGAGTTAACTTCTGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTTCTGCTTAGCCTAGTGTTCAAAATTGAGTTAACTTCTGGAAT  200

seq1  GATCTCAATTCTTAGCTAAAAAACTACAAATAAATTGATTCAGGAGATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCAATTCTTAGCTAAAAAACTACAAATAAATTGATTCAGGAGATGT  250

seq1  CTCCAAACATTCCTTTTTTACTTACTTTAGTCCATACTAAGAGTAAGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAACATTCCTTTTTTACTTACTTTAGTCCATACTAAGAGTAAGCTG  300

seq1  TAATGTTAATACTGTTTTTGTCTTCCCTTTTTCCATAATTTGTGATTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTAATACTGTTTTTGTCTTCCCTTTTTCCATAATTTGTGATTTTA  350

seq1  TTTTATATATATAGAAATAGTATTTGAGCAGAGTAACTTATTCTGGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATATATAGAAATAGTATTTGAGCAGAGTAACTTATTCTGGTTTT  400

seq1  CACCATGATTGGGGTAGACTGGAATTGGTTTTATAGTTAAGGAAAGTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGATTGGGGTAGACTGGAATTGGTTTTATAGTTAAGGAAAGTTAT  450

seq1  ATGCATTCTAGTTTCCATGGATCTATGGGATGTCTGACATCCTCTGCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTCTAGTTTCCATGGATCTATGGGATGTCTGACATCCTCTGCATC  500

seq1  ATGTGGTCAGTGTATGCACTGGAGGTCGAACAGTGAAGTAGAGAAATTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTCAGTGTATGCACTGGAGGTCGAACAGTGAAGTAGAGAAATTGT  550

seq1  TTTCTTTCTTGAAAGTTATGTTCTTTTGAGTATTAGGCAGAAAAAAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTGAAAGTTATGTTCTTTTGAGTATTAGGCAGAAAAAAAAAA  600

seq1  CGTGATCATACTGAATAAGGAGCATAGTATAGGGTTGTTTCATTTAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGATCATACTGAATAAGGAGCATAGTATAGGGTTGTTTCATTTAAAAA  650

seq1  TGTAGAGTTGGTGTGAAATTAGGAAAATTCAAGAGGAAATAAGCCTGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAGTTGGTGTGAAATTAGGAAAATTCAAGAGGAAATAAGCCTGGTA  700

seq1  CAAGATGTAGAAAATTTAAACATGGAGGCATCATTGTAGTGGATTTGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGTAGAAAATTTAAACATGGAGGCATCATTGTAGTGGATTTGGCC  750

seq1  TAATGCTGCTTGTAACCTATGTTAATTTTGATCCCAAAAATTGCTTGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTGCTTGTAACCTATGTTAATTTTGATCCCAAAAATTGCTTGCAC  800

seq1  GAATATCTTCATGTAGTGTTAATTAGTTAGACTGCTTTGTGCACTTTGTG  850
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GAATATCTTCATGTAGTG-TAATTAGTTAGACTGCTTTGTGCACTTTGTG  849

seq1  CTCTCAACTGCTTGCACATGCACACAAGACCAAAAGC-TATCTGGATTCA  899
      ||||||||||||||||||||||||||||| ||||||| ||||||||||||
seq2  CTCTCAACTGCTTGCACATGCACACAAGA-CAAAAGCTTATCTGGATTCA  898

seq1  C-TAATCTCACAC  911
      | |||||| ||||
seq2  CTTAATCT-ACAC  910