BAC Information

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BAC

Clone NameB6Ng01-104D21
Chromosome5 (Build37)
Map Location 90,199,699 - 90,200,827
singlet/doubletsinglet
Overlap geneAdamts3
Upstream geneDck, Mkrn1-ps1, Slc4a4, Gc, LOC622870, Npffr2, LOC631105
Downstream geneEG665733, Cox18, Ankrd17, Alb1, Afp, Afm, LOC100040105, LOC622307, Rassf6, Cxcl5, Ppbp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104D21.bB6Ng01-104D21.g
ACCDH912599DH912600
length1,1311,080
definitionDH912599|Mus musculus domesticus DNA, BAC clone: B6Ng01-104D21, 5' end.DH912600|Mus musculus domesticus DNA, BAC clone: B6Ng01-104D21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctttgatcccctcacaggtcatgagaatctcccaaagcaaacg
actggggcacctattcacacgtctaaagccaaagaagactctgcatcaac
ccaggcccgagcctctccaagactaagtcttcccataactcctgcttgct
ctgtagtttcacttcccagtaaccaggagcaactcctaaatcatttctga
ccatccatgtttcccacctgcgacaaagacactccttcagggcaccatga
caaccacaccagcaacacaaacacttgggttcctgtaggaaaatgaaaaa
ctctgaaagagagccaggagataaaggcttgtttcccactggtaggaagt
aattacaaaaattactttaacacagagctactggagaatgaatagcttgt
aatgtgaggagaaaagcttaaggcctagagactcaacacaaaatatggaa
agcttagggatgccatgtaaacacccccttacccctggactgtgtggaac
aaactgcttagcatggcagtgtgagcagtcttaagggctgggcagggtgt
ttgtttgtctgtctgtttaatcttagtttggacaaatgattgaatattgg
aggttgattttgacttcatataattattaattacaatatcatagagtcac
acagaaaattggtttgtacagactacagatgtcaaaaagtgaataattcc
ccaatcacagagaagtgaatcaaactctcccacagatgtagagactggga
tgatatcaagatcatgacaatgtgaagcttctctatcataagcgtgccaa
gcttctgtttgtcactagctagaaggatagcactgaatcctaacaggtac
aggaagagcttttagtttacccaaactgccaactctgcactgaccgtaac
tcacagtgacaccatttaatggaagtctcaatgtacagcaagtggtactt
gcctattgcatgtgggggccagagattagctttgggtattcttcaactat
ttcttctccatctcaattttgacatgggttttctcatttgaatctggagc
tggccatttggctgggcagctggccagttgagttctcagatctacctctt
ctccatttcccagagtaggtgaaaacttcat
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattggttgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacacttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgccgcctgagaagctctgtggctcttgtccggaaggaggc
cggccgtctggagctgaggatggcgctgcctcagaagctctgtggctctt
gccgggaaggtggctggttgtctggagctgaagatggcgccgcccagaag
ctctgcgactctcgcccgtcccagaaacggctggcactctgtattccaca
cggtcacccgtgcagcctgccctccgcggagtcccggagccaagaaggct
cccgccggcgcctgtgccacaaacctctcaggccgggcagacccccgtgc
tctcaccaggaaaggtggccggctgtctggagctgaagatggcgccgccc
agaagctctgcgactctcgcccgtcccaaaaacggctggcactctgtatt
ccacacggtcacccgtgcagcctgcccttcgcggagtccggagcaagaag
gttcccgccggcgctgtgcacaaacctctcaggccgggcagaaccccgtg
ctctcacaaggaagtggctggctgtctggaactgaagatggcgccctcaa
atctctgcacttctcgctcgtctagaaacggctggcactctggatatcca
cacggtcacccgtggcagcctgtgccttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_90199699_90200827
seq2: B6Ng01-104D21.b_44_1174

seq1  GAATTCTCTTTGATCCCCTCACAGGTCATGAGAATCTCCCAAAGCAAACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTGATCCCCTCACAGGTCATGAGAATCTCCCAAAGCAAACG  50

seq1  ACTGGGGCACCTATTCACACGTCTAAAGCCAAAGAAGACTCTGCATCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGGCACCTATTCACACGTCTAAAGCCAAAGAAGACTCTGCATCAAC  100

seq1  CCAGGCCCGAGCCTCTCCAAGACTAAGTCTTCCCATAACTCCTGCTTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCCGAGCCTCTCCAAGACTAAGTCTTCCCATAACTCCTGCTTGCT  150

seq1  CTGTAGTTTCACTTCCCAGTAACCAGGAGCAACTCCTAAATCATTTCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTTTCACTTCCCAGTAACCAGGAGCAACTCCTAAATCATTTCTGA  200

seq1  CCATCCATGTTTCCCACCTGCGACAAAGACACTCCTTCAGGGCACCATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCATGTTTCCCACCTGCGACAAAGACACTCCTTCAGGGCACCATGA  250

seq1  CAACCACACCAGCAACACAAACACTTGGGTTCCTGTAGGAAAATGAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCACACCAGCAACACAAACACTTGGGTTCCTGTAGGAAAATGAAAAA  300

seq1  CTCTGAAAGAGAGCCAGGAGATAAAGGCTTGTTTCCCACTGGTAGGAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAAGAGAGCCAGGAGATAAAGGCTTGTTTCCCACTGGTAGGAAGT  350

seq1  AATTACAAAAATTACTTTAACACAGAGCTACTGGAGAATGAATAGCTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAAAAATTACTTTAACACAGAGCTACTGGAGAATGAATAGCTTGT  400

seq1  AATGTGAGGAGAAAAGCTTAAGGCCTAGAGACTCAACACAAAATATGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAGGAGAAAAGCTTAAGGCCTAGAGACTCAACACAAAATATGGAA  450

seq1  AGCTTAGGGATGCCATGTAAACACCCCCTTACCCCTGGACTGTGTGGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAGGGATGCCATGTAAACACCCCCTTACCCCTGGACTGTGTGGAAC  500

seq1  AAACTGCTTAGCATGGCAGTGTGAGCAGTCTTAAGGGCTGGGCAGGGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCTTAGCATGGCAGTGTGAGCAGTCTTAAGGGCTGGGCAGGGTGT  550

seq1  TTGTTTGTCTGTCTGTTTAATCTTAGTTTGGACAAATGATTGAATATTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTCTGTCTGTTTAATCTTAGTTTGGACAAATGATTGAATATTGG  600

seq1  AGGTTGATTTTGACTTCATATAATTATTAATTACAATATCATAGAGTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGATTTTGACTTCATATAATTATTAATTACAATATCATAGAGTCAC  650

seq1  ACAGAAAATTGGTTTGTACAGACTACAGATGTCAAAAAGTGAATAATTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAATTGGTTTGTACAGACTACAGATGTCAAAAAGTGAATAATTCC  700

seq1  CCAATCACAGAGAAGTGAATCAAACTCTCCCACAGATGTAGAGACTGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCACAGAGAAGTGAATCAAACTCTCCCACAGATGTAGAGACTGGGA  750

seq1  TGATATCAAGATCATGACAATGTGAAGCTTCTCTATCATAAGCGTGCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATCAAGATCATGACAATGTGAAGCTTCTCTATCATAAGCGTGCCAA  800

seq1  GCTTCTGTTTGTCACTAGCTAGAAGGATAGCACTGAATCCTAACAGGTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGTTTGTCACTAGCTAGAAGGATAGCACTGAATCCTAACAGGTAC  850

seq1  AGGAAGAGC-TATAGTTTACCCAAACTGCCAACTCTGCACTGACCGTAAC  899
      ||||||||| | ||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAGCTTTTAGTTTACCCAAACTGCCAACTCTGCACTGACCGTAAC  900

seq1  TCACAGTGACAACA-TTAATGGAAGTCTCAATGTACAGCAGGTGGTACTT  948
      ||||||||||| || ||||||||||||||||||||||||| |||||||||
seq2  TCACAGTGACACCATTTAATGGAAGTCTCAATGTACAGCAAGTGGTACTT  950

seq1  GCCTA-TGCATGT-GGGGCCAGAGATTAGCTTTGGGTA-TCTTCCACTAT  995
      ||||| ||||||| |||||||||||||||||||||||| ||||| |||||
seq2  GCCTATTGCATGTGGGGGCCAGAGATTAGCTTTGGGTATTCTTCAACTAT  1000

seq1  TTC-TCTCCATCTCAATTTTTGACATGGGGTTTCTCA-TTGAATCTGGAG  1043
      ||| |||||||||||| |||||||||||| ||||||| ||||||||||||
seq2  TTCTTCTCCATCTCAA-TTTTGACATGGGTTTTCTCATTTGAATCTGGAG  1049

seq1  CTGGCCATTTTGGCTGGGCAGCCTGGCCAGTTGAGTTCCCAAGATCTACC  1093
      ||||||| ||||||||||||| |||||||||||||||| | |||||||||
seq2  CTGGCCA-TTTGGCTGGGCAG-CTGGCCAGTTGAGTTCTC-AGATCTACC  1096

seq1  TC-TCTCCATTTCACCAGAGTAGGTGAAATACTTCAT  1129
      || |||||||||| ||||||||||||||| |||||||
seq2  TCTTCTCCATTTC-CCAGAGTAGGTGAAA-ACTTCAT  1131