BAC Information

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BAC

Clone NameB6Ng01-106F12
Chromosome5 (Build37)
Map Location 126,107,726 - 126,108,534
singlet/doubletsinglet
Overlap geneTmem132b
Upstream geneAtp6v0a2, Dnahc10, Ccdc92, Zfp664, 3110032G18Rik, Ncor2, Scarb1, Ubc, Dhx37, Bri3bp, Aacs
Downstream geneEG231736, LOC100039178, LOC665760
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106F12.bB6Ng01-106F12.g
ACCDH914112DH914113
length809373
definitionDH914112|Mus musculus domesticus DNA, BAC clone: B6Ng01-106F12, 5' end.DH914113|Mus musculus domesticus DNA, BAC clone: B6Ng01-106F12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagccagacgctgcagtctgccaagggctcagagcctggcccgt
gggttcttgttgttcccaacacaataaagcaacagatgagattcacaggt
ggctgtggggcaccatagaccatctccctaaagtacctgggatggaagac
agacagaccccagtgaccaaagacctgccctccatatccttgcctccctg
tgccttctggatatcaccctaactccacttccccatggctggtgcttccc
cgagtgtgaggacacactgctgtgcagatggtgtgtagctagcgtcatta
cagaacatggtaacttttggaaggagggcgaactaacaaaacacagcatg
agaacaacacagaggtgagtctatgtttgtgctgggtctcacccaaccag
gctgcctgtcccgtcaccatagtaacatgaagctgcttcagcaaagtcag
tcaaactttctacttggagttccactgctccgtgggctccttcaagacca
cagcagccaccagttacagaacaagtcacccgggctgataattatgtaac
ccagcgagtgccgcacacacctgcgccctgcttccttctctcctgtatca
atacagtttcttttaaactcaaaagcagaggagggtgatgctctgttcct
gactgtaattaactccagaaatatgtgtccttttgaaatgaggtcaacct
ctgtgcacagttctgcggagtctctgaggagactgacactgggccctgag
aactgacgatagggtgaactacagcctccctgcccatcttgtgtgtgtgt
gtgtgtggg

ctgctttgattcagataattgtcggaagaacgtttaaggagttgttttgc
cagaaagatggaataaagttagaatcaagactagaacgtgcctcctcctc
acagaatagtgagaaaaggctgcataataaggaatataataagctttcat
aaactgcattaagaagagaaataggcttgggacaaatctgtgatcaagga
aaaacatccattctaggtcaggttcaaggaggaggccacaggtgtgaact
ctgataaagcaaggccatggtaaactgctgctttgaaggtttaatgattt
tagaaaatgaaagacgggcttgaacttcctattgatagctttctgtacct
cccctttttttgtaatattttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_126107726_126108534
seq2: B6Ng01-106F12.b_45_853 (reverse)

seq1  CACACACACACACACACACAAGATGGGCAGGGAGGCTGTAGTTCACCCTA  50
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACACACACACACACAAGATGGGCAGGGAGGCTGTAGTTCACCCTA  50

seq1  TCGTCAGTTCTCAGGGCCCAGTGTCAGTCTCCTCAGAGACTCCGCAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCAGTTCTCAGGGCCCAGTGTCAGTCTCCTCAGAGACTCCGCAGAAC  100

seq1  TGTGCACAGAGGTTGACCTCATTTCAAAAGGACACATATTTCTGGAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACAGAGGTTGACCTCATTTCAAAAGGACACATATTTCTGGAGTTA  150

seq1  ATTACAGTCAGGAACAGAGCATCACCCTCCTCTGCTTTTGAGTTTAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGTCAGGAACAGAGCATCACCCTCCTCTGCTTTTGAGTTTAAAAG  200

seq1  AAACTGTATTGATACAGGAGAGAAGGAAGCAGGGCGCAGGTGTGTGCGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTATTGATACAGGAGAGAAGGAAGCAGGGCGCAGGTGTGTGCGGC  250

seq1  ACTCGCTGGGTTACATAATTATCAGCCCGGGTGACTTGTTCTGTAACTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGCTGGGTTACATAATTATCAGCCCGGGTGACTTGTTCTGTAACTGG  300

seq1  TGGCTGCTGTGGTCTTGAAGGAGCCCACGGAGCAGTGGAACTCCAAGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCTGTGGTCTTGAAGGAGCCCACGGAGCAGTGGAACTCCAAGTAG  350

seq1  AAAGTTTGACTGACTTTGCTGAAGCAGCTTCATGTTACTATGGTGACGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTGACTGACTTTGCTGAAGCAGCTTCATGTTACTATGGTGACGGG  400

seq1  ACAGGCAGCCTGGTTGGGTGAGACCCAGCACAAACATAGACTCACCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAGCCTGGTTGGGTGAGACCCAGCACAAACATAGACTCACCTCTG  450

seq1  TGTTGTTCTCATGCTGTGTTTTGTTAGTTCGCCCTCCTTCCAAAAGTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTCTCATGCTGTGTTTTGTTAGTTCGCCCTCCTTCCAAAAGTTAC  500

seq1  CATGTTCTGTAATGACGCTAGCTACACACCATCTGCACAGCAGTGTGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTCTGTAATGACGCTAGCTACACACCATCTGCACAGCAGTGTGTCC  550

seq1  TCACACTCGGGGAAGCACCAGCCATGGGGAAGTGGAGTTAGGGTGATATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACTCGGGGAAGCACCAGCCATGGGGAAGTGGAGTTAGGGTGATATC  600

seq1  CAGAAGGCACAGGGAGGCAAGGATATGGAGGGCAGGTCTTTGGTCACTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGCACAGGGAGGCAAGGATATGGAGGGCAGGTCTTTGGTCACTGG  650

seq1  GGTCTGTCTGTCTTCCATCCCAGGTACTTTAGGGAGATGGTCTATGGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTCTGTCTTCCATCCCAGGTACTTTAGGGAGATGGTCTATGGTGC  700

seq1  CCCACAGCCACCTGTGAATCTCATCTGTTGCTTTATTGTGTTGGGAACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGCCACCTGTGAATCTCATCTGTTGCTTTATTGTGTTGGGAACAA  750

seq1  CAAGAACCCACGGGCCAGGCTCTGAGCCCTTGGCAGACTGCAGCGTCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACCCACGGGCCAGGCTCTGAGCCCTTGGCAGACTGCAGCGTCTGG  800

seq1  CTGGAATTC  809
      |||||||||
seq2  CTGGAATTC  809


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