BAC Information

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BAC

Clone NameB6Ng01-107C12
Chromosome5 (Build37)
Map Location 51,609,918 - 51,610,436
singlet/doubletsinglet
Overlap genenone
Upstream geneEG637307, LOC100041015, LOC242987, EG624734, LOC666265, LOC100041059
Downstream genePpargc1a, Dhx15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107C12.bB6Ng01-107C12.g
ACCDH914702DH914703
length9691,157
definitionDH914702|Mus musculus domesticus DNA, BAC clone: B6Ng01-107C12, 5' end.DH914703|Mus musculus domesticus DNA, BAC clone: B6Ng01-107C12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttccaacacttttattatgaatgggtgttggatcttg
tcaaatgatttttctgcatctaacgagatgatcatgtggtttttgtgttt
gagtttgtttatataatggattacattgatggatttacgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatatgttcttggattcggttagccagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
cgttctgtggtttaggtatcaaagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactattaataactgcttctattact
ttaggggatatgagactgtttagatggtcaacttgatccgattcaacttt
ggtacctggtatttgtccagaaattcgtccatttcttccaggtttttcag
ttttgttgagtatagccttttgtagaaggatctgatggtgttttggattt
cttcaggatctgttgttatgtctcccttttcatttttgattttgttaatt
aggatttttgtccctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttttcaaagaaccaactcctcgtttggttaattctttga
atagtcttcttgttccacgtggttgatttcactcttgagtttgattattt
ctgccttagtcctcttgggggatttgcttccttttttttctagagctttt
agatgtgttgtcaagctgctagtatgtgctctctaccggtttttctagag
gcactcagagctatgagtt
gaattcttacctgaggaatactgaatggctgagaagcacctgaaaaactg
ttcaacatccttaatcatcatggaaaagaaatcaaaacaaccctcagatt
ccccctcacaccagtcagaatgtctaagatcaaaaattcaggtcacagca
gatgctggcaaggatgtagagaaagaggagcactcctccatttttggtgg
gattgtaagcttgtacaaccactctggaagtcagtctggtggttcctcaa
aaaattggacacagtactaccggaggatcctgcaatacctctcctgggca
tatatccagaagatgttccaaatggtaagaacgacacatgctccactacg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagagtaatggatacagaaagtgtggtacatttacaaaatgg
agtactactccgctattaaaaagaatgaatttatgaaattcctaggcaaa
tggatggacctggagggcatcatcctgagtgaggtaacccaatcaaaaag
gaactcacacaatatatactcactgataagtggatattagcccagaaact
tatgataccgaagatataggatacaatttgctgaacgtatgaaactcaag
atgaatgaagaccaatgtgtggacactttgccccttcttagaatttggaa
caaaacacccatggaaggcattacagagacaattttttggagctgtggcg
aaaggatggaccatctagagactgccatatccagggatccatcccataat
cagcttccaaatgctgacattattgcatacactaggaagaatttgctgaa
aggacccagatacagctgtctcttgtgagactataccgaggcctagcaaa
cacagaagtggatgctcagagtcagctattggatggatcacaggccccaa
tggagagctagagaagtacccagagctaaagggatctgcaatcctatagg
tggaacaacaatatgactaccagtacccccgagcttgtgtttctaggtgc
atatgaatcagagatgctagtcgcctcatgaagaggcccattggtctgca
acttatatgcctcatacagggaccgacagggtcaagaagtagatgttgtg
tgtgcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_51609918_51610436
seq2: B6Ng01-107C12.b_502_1014 (reverse)

seq1  AACTCATAGCTCTGAGTGCCTCCAAGAAGAAACCGG-AGAGAACACATAC  49
      ||||||||||||||||||||| | |||| ||||||| ||||| |||||||
seq2  AACTCATAGCTCTGAGTGCCT-CTAGAA-AAACCGGTAGAGAGCACATAC  48

seq1  TAGCAGCTTGACAACACATCTAAAAGCTCTAG-AAAAAAAGGAAGCAAAT  98
      |||||||||||||||||||||||||||||||| |||||||||||||||| 
seq2  TAGCAGCTTGACAACACATCTAAAAGCTCTAGAAAAAAAAGGAAGCAAA-  97

seq1  TCACCCAAGAGGAGTAGACGGCAGGAAATAATCAAACTCAGGGGTGAAAT  148
      || |||||||||| |  | |||| |||||||||||||||| | |||||||
seq2  TCCCCCAAGAGGACT--AAGGCA-GAAATAATCAAACTCAAGAGTGAAAT  144

seq1  CAACCAAGTGGAAACAAGAAGAACTATTCAAAGAATTAACCAAATGAGGA  198
      |||||| |||| ||||||||| |||||||||||||||||||||| |||||
seq2  CAACCACGTGG-AACAAGAAG-ACTATTCAAAGAATTAACCAAACGAGGA  192

seq1  GTTGGTTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTC  248
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTTGGTTCTTTGAAAAAATCAACAAGATAGATAAACCCTTAGCTAGACTC  242

seq1  ACTAAAGGGCACAGGGAC-AAAATCCTAATTAACAAAATCAGAAATGAAA  297
      |||| ||||||||||||| |||||||||||||||||||||| ||||||||
seq2  ACTAGAGGGCACAGGGACAAAAATCCTAATTAACAAAATCAAAAATGAAA  292

seq1  AGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCC  342

seq1  TTCTACAAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGA  397
      |||||||||||||||||||||||||||||| |||||||||| ||||||||
seq2  TTCTACAAAAGGCTATACTCAACAAAACTGAAAAACCTGGAAGAAATGGA  392

seq1  CAAATTTCTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTG  447
      | |||||||||||| ||||||||||||||||||||||| |||||||||||
seq2  CGAATTTCTGGACAAATACCAGGTACCAAAGTTGAATC-GGATCAAGTTG  441

seq1  ACCATCTAAACAGTCCCATATCACCTAAAGAAATAGAAGCAGTTATTAAT  497
      ||||||||||||||| |||||| ||||||| |||||||||||||||||||
seq2  ACCATCTAAACAGTCTCATATCCCCTAAAGTAATAGAAGCAGTTATTAAT  491

seq1  AGTCTCCCAGCCAAAAAAAGCC  519
      ||||||||||||||||||||||
seq2  AGTCTCCCAGCCAAAAAAAGCC  513