BAC Information

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BAC

Clone NameB6Ng01-107G14
Chromosome5 (Build37)
Map Location 15,400,563 - 15,401,661
singlet/doubletsinglet
Overlap genenone
Upstream genePclo, ENSMUSG00000033219, LOC624245, Speer8-ps1, Speer4c, Speer4d, 4930572O03Rik, Speer7-ps1, 4930519H02Rik
Downstream geneLOC100041781, Cacna2d1, LOC668121, Hgf, EG668131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107G14.bB6Ng01-107G14.g
ACCDH914887DH914888
length1,083907
definitionDH914887|Mus musculus domesticus DNA, BAC clone: B6Ng01-107G14, 5' end.DH914888|Mus musculus domesticus DNA, BAC clone: B6Ng01-107G14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcatctagatcggatcactcagtttccttctgattagacaagct
ccatctttctgccttctttggtcaatatcaatttaaatattcacagcaca
atagagggggactctgatttgtgttgagagtagatggaattgaaatacca
ctatagctcagccttttgcttccacaccctcagcctctctaccttcttgg
gtctcccattcttccctacctatgttgcccaaagctgaatatcactgctg
accttcattttcccagagcacagcttaaagtattttagatgcttataaga
atcctcaattttgttgatattgattggcaattagaactggtgttgtgacg
agcacatagaagcacaaaacatcaactttgaaggctagattttgtcatat
ctggatatctaattaagcaagacccacagtggaatgtctctgtggtcagc
agtgtctgtacacacagactttccctgtgtgtgcctgaggcttgttctcc
tttctcctagcaactccatttcctctgtttcaaagctgctgactctttac
cctcagtcccttgaggtataattaaacaattcttcttgctttcttgagca
gagaaacagctcattctttacttgctccattccttcccaaaatagtattc
gtgttcccaactttaaaggctgaaagcattctttcctttaaccagcaaat
ggaaatattcttcaatttaaattacacccatcctttttacacagcacaca
gaacctgtccagtgtttgatggaaacaaagtactacacctttccctgttt
tctcttcatagtgtttggtgatttaaaactttaaaacaaacttgttaaaa
ataaaaacaaaaactaagaagaaaatgacaatgaatgtaattactacctt
taaggcatagtatgattataaacaatatataagtatacagatatactgta
gccagatatttcagtcattcacagagtcactagtgttgacatgtcaaata
ccacatgaaatttaagctttgtatcttcacaacctaaaaagaaagccaca
gaatagaatgtcactctacaacaaaatatagga

gaattctgtactaaagctctctttccttgacattttattatttgtttttg
ttgaggggtttttaataatttctattttcttaggggatatgggcctgttt
agatagtttatctgcttttgttttaactttggtatgtgttatttgttgag
aaaatcatctatttcacctagattttccagtgttttaagtataggctttt
gtaataggatatgatgattttttaaatttcttccacttctgttgttatat
ctcccttttcacttctaattttgttaatttggatactgtctctatgccac
atttagttagtctgacaaggggtttatctatttgtagatttttctaaaag
aaccagcttttggttttgttgattctttgtatcattctttgtttccattt
ggttggtttcagccctgagtttaactatttcctgtcttctgctcctcttg
ggtgtgcttgcttcttttttgttctagggcttccaggtgtgctgttaaat
tactagtgtaggatctgtccaattaatttatgagtgcacttagtgctagg
gatttttctcttagctttgattgtatctcataagtttgggtatattgtgc
cttcgtttttattaaattctaaaaaagtctttaatatctttctctatttc
tttgctgaccaagttctcaatgagtagagcgttttcaatgggtatgtggg
ttttctgttgttttggttgttactgaagtctagcttagtccctagtgatt
ttcaaggatgcatggggataattcctatcagtccaggcttgttttgtcac
ccaattacacagtgaattttgtagaaggtctgtgagatgctgagagaggg
tatattctttttgtttagaggaaataactggatatacctggtaagccctt
ttggttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_15400563_15401661
seq2: B6Ng01-107G14.b_46_1128 (reverse)

seq1  TCCTATTATTTTTGTTGTTAGAGTTGACATTCTATTCTTGTGGCTGTCTT  50
      ||||||   |||||||| ||||| ||||||||||||| ||||||| ||  
seq2  TCCTAT--ATTTTGTTG-TAGAG-TGACATTCTATTC-TGTGGCTTTC--  43

seq1  TTTTTAGGTTTGTTGAAGGATACAAAGCTTAAATTTCATGTGGTATTTTG  100
      ||||||||||   |||| ||||||||||||||||||||||||||||||  
seq2  TTTTTAGGTT--GTGAA-GATACAAAGCTTAAATTTCATGTGGTATTT--  88

seq1  AACATGTTCAACAACTAGTTGACTCTGTGAATGACTGAAATTATCTGGCT  150
       ||||| ||||| ||||| ||||||||||||||||||||| |||||||||
seq2  GACATG-TCAAC-ACTAG-TGACTCTGTGAATGACTGAAA-TATCTGGCT  134

seq1  ACAGTATATCTGTATACTTATATATTGTTTATAATCATACTATGCCTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATATCTGTATACTTATATATTGTTTATAATCATACTATGCCTTAA  184

seq1  AGGTAGTAATTACATTCATTGTCATTTTCTTCTTAGTTTTTGTTTTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGTAATTACATTCATTGTCATTTTCTTCTTAGTTTTTGTTTTTATT  234

seq1  TTTAACAAGTTTGTTTTAAAGTTTTAAATCACCAAACACTATGAAGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAAGTTTGTTTTAAAGTTTTAAATCACCAAACACTATGAAGAGAA  284

seq1  AACAGGGAAAGGTGTAGTACTTTGTTTCCATCAAACACTGGACAGGTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGAAAGGTGTAGTACTTTGTTTCCATCAAACACTGGACAGGTTCT  334

seq1  GTGTGCTGTGTAAAAAGGATGGGTGTAATTTAAATTGAAGAATATTTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTGTGTAAAAAGGATGGGTGTAATTTAAATTGAAGAATATTTCCA  384

seq1  TTTGCTGGTTAAAGGAAAGAATGCTTTCAGCCTTTAAAGTTGGGAACACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGGTTAAAGGAAAGAATGCTTTCAGCCTTTAAAGTTGGGAACACG  434

seq1  AATACTATTTTGGGAAGGAATGGAGCAAGTAAAGAATGAGCTGTTTCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTATTTTGGGAAGGAATGGAGCAAGTAAAGAATGAGCTGTTTCTCT  484

seq1  GCTCAAGAAAGCAAGAAGAATTGTTTAATTATACCTCAAGGGACTGAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAGAAAGCAAGAAGAATTGTTTAATTATACCTCAAGGGACTGAGGG  534

seq1  TAAAGAGTCAGCAGCTTTGAAACAGAGGAAATGGAGTTGCTAGGAGAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGTCAGCAGCTTTGAAACAGAGGAAATGGAGTTGCTAGGAGAAAG  584

seq1  GAGAACAAGCCTCAGGCACACACAGGGAAAGTCTGTGTGTACAGACACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAAGCCTCAGGCACACACAGGGAAAGTCTGTGTGTACAGACACTG  634

seq1  CTGACCACAGAGACATTCCACTGTGGGTCTTGCTTAATTAGATATCCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCACAGAGACATTCCACTGTGGGTCTTGCTTAATTAGATATCCAGA  684

seq1  TATGACAAAATCTAGCCTTCAAAGTTGATGTTTTGTGCTTCTATGTGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACAAAATCTAGCCTTCAAAGTTGATGTTTTGTGCTTCTATGTGCTC  734

seq1  GTCACAACACCAGTTCTAATTGCCAATCAATATCAACAAAATTGAGGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAACACCAGTTCTAATTGCCAATCAATATCAACAAAATTGAGGATT  784

seq1  CTTATAAGCATCTAAAATACTTTAAGCTGTGCTCTGGGAAAATGAAGGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAAGCATCTAAAATACTTTAAGCTGTGCTCTGGGAAAATGAAGGTC  834

seq1  AGCAGTGATATTCAGCTTTGGGCAACATAGGTAGGGAAGAATGGGAGACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGATATTCAGCTTTGGGCAACATAGGTAGGGAAGAATGGGAGACC  884

seq1  CAAGAAGGTAGAGAGGCTGAGGGTGTGGAAGCAAAAGGCTGAGCTATAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGGTAGAGAGGCTGAGGGTGTGGAAGCAAAAGGCTGAGCTATAGT  934

seq1  GGTATTTCAATTCCATCTACTCTCAACACAAATCAGAGTCCCCCTCTATT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTCAATTCCATCTACTCTCAACACAAATCAGAGTCCCCCTCTATT  984

seq1  GTGCTGTGAATATTTAAATTGATATTGACCAAAGAAGGCAGAAAGATGGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTGAATATTTAAATTGATATTGACCAAAGAAGGCAGAAAGATGGA  1034

seq1  GCTTGTCTAATCAGAAGGAAACTGAGTGATCCGATCTAGATGAGAATTC  1099
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTCTAATCAGAAGGAAACTGAGTGATCCGATCTAGATGAGAATTC  1083


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