BAC Information

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BAC

Clone NameB6Ng01-108D02
Chromosome5 (Build37)
Map Location 6,168,079 - 6,169,206
singlet/doubletsinglet
Overlap genenone
Upstream genePftk1, 1700015F17Rik, Cldn12, Gtpbp10, LOC667699, EG667705, A330021E22Rik, Steap2, Steap1, LOC727711, LOC546854
Downstream geneLOC100041208, EG435830
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108D02.bB6Ng01-108D02.g
ACCDH915440DH915441
length1,122367
definitionDH915440|Mus musculus domesticus DNA, BAC clone: B6Ng01-108D02, 5' end.DH915441|Mus musculus domesticus DNA, BAC clone: B6Ng01-108D02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaatcacatcatgctaatttcgcttcctttacacacttgctcac
atttgatttcaagtgaagcagatggttgtgttctattttgctttccaact
gtcagtcgaggtaattgaagtgaaaagaaactgtttgtcctggcagctct
ggaaggaccatgagcatctaatgggatgaaaacattagctaccaagtcca
ggcctgaagcacctttatctcacctgtaatcagacccagctaagaatcca
ccatccagagataatgattttccatcactgttagtctggttggagtccaa
attgctttcctgaaagagacattactgcaaattatgtatggtctttccat
tgctccctctcctcctggtcaggtagttttcatgccattctggatttgta
ggctgcagagtctgtctctaggagtttcctaagtaaatagttgtgctttc
cattaagaacatcttttattgatgcatctaacatgttttattcccatcca
tttgagctttagcttttaagagtaataaagaaatttttacttgcaggact
taatagggttcaatatttgctcatttggaagttacattattctactgtat
ttttattaccgtagaaccatttattttattttcatgtcttgtgtgtgcta
ggcatgtgtgcatatgtgttcacttatgcacacatgtgcaaagaggcctg
aaactgacgttagatgttttcctggatccatctccactttgtttactagg
caaggcctttcagttgaacccagaactctttcatagtctaatctagactg
actgattactattggtatctcctgagtatgccttctcaggaattacagac
agccaccatcctagcctagcctttatgtgggttcatcttgatgagcagtg
cctctcaagttggtacagcaagtgctttatagactgatccatttcctcag
cccctgtagagacaacattagttactccattagcaaagtttaaattgagt
gttaaatgagcattgcaaggatcttattagacttcacacaatattgtgac
tgaaagatttcatttaaatttttgtaaatctaattctgttacatgaggta
ataggtctttgattctgtcgac

aaatatctgagcccatggaagacattcttattcaaatcagcactctctct
ctctctctctctctctctctctctctctctctctctctctctctctctct
ctctctctattttttcttgataacgcggacatgggggtatttccctaaaa
ctaaaaaactactctatggctgtctgctcccctgtctcgaggttatacaa
ttactcgcgcagcgacataggaatttaacttactgttgggtagggggcga
ccgttcggacgcaggtgtgtgagacacacagtgttgtgtgtgagacaggt
tatcccacacccttccctacagggagagatatatattaataatttatctc
gttagagagaaaagaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_6168079_6169206
seq2: B6Ng01-108D02.b_48_1169

seq1  GAATTCCAATCACATCATGCTAATTTCGCTTCCTTTACACACTTGCTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATCACATCATGCTAATTTCGCTTCCTTTACACACTTGCTCAC  50

seq1  ATTTGATTTCAAGTGAAGCAGATGGTTGTGTTCTATTTTGCTTTCCAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATTTCAAGTGAAGCAGATGGTTGTGTTCTATTTTGCTTTCCAACT  100

seq1  GTCAGTCGAGGTAATTGAAGTGAAAAGAAACTGTTTGTCCTGGCAGCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTCGAGGTAATTGAAGTGAAAAGAAACTGTTTGTCCTGGCAGCTCT  150

seq1  GGAAGGACCATGAGCATCTAATGGGATGAAAACATTAGCTACCAAGTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGACCATGAGCATCTAATGGGATGAAAACATTAGCTACCAAGTCCA  200

seq1  GGCCTGAAGCACCTTTATCTCACCTGTAATCAGACCCAGCTAAGAATCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGAAGCACCTTTATCTCACCTGTAATCAGACCCAGCTAAGAATCCA  250

seq1  CCATCCAGAGATAATGATTTTCCATCACTGTTAGTCTGGTTGGAGTCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAGAGATAATGATTTTCCATCACTGTTAGTCTGGTTGGAGTCCAA  300

seq1  ATTGCTTTCCTGAAAGAGACATTACTGCAAATTATGTATGGTCTTTCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTTCCTGAAAGAGACATTACTGCAAATTATGTATGGTCTTTCCAT  350

seq1  TGCTCCCTCTCCTCCTGGTCAGGTAGTTTTCATGCCATTCTGGATTTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCTCTCCTCCTGGTCAGGTAGTTTTCATGCCATTCTGGATTTGTA  400

seq1  GGCTGCAGAGTCTGTCTCTAGGAGTTTCCTAAGTAAATAGTTGTGCTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCAGAGTCTGTCTCTAGGAGTTTCCTAAGTAAATAGTTGTGCTTTC  450

seq1  CATTAAGAACATCTTTTATTGATGCATCTAACATGTTTTATTCCCATCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGAACATCTTTTATTGATGCATCTAACATGTTTTATTCCCATCCA  500

seq1  TTTGAGCTTTAGCTTTTAAGAGTAATAAAGAAATTTTTACTTGCAGGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGCTTTAGCTTTTAAGAGTAATAAAGAAATTTTTACTTGCAGGACT  550

seq1  TAATAGGGTTCAATATTTGCTCATTTGGAAGTTACATTATTCTACTGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGGGTTCAATATTTGCTCATTTGGAAGTTACATTATTCTACTGTAT  600

seq1  TTTTATTACCGTAGAACCATTTATTTTATTTTCATGTCTTGTGTGTGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTACCGTAGAACCATTTATTTTATTTTCATGTCTTGTGTGTGCTA  650

seq1  GGCATGTGTGCATATGTGTTCACTTATGCACACATGTGCAAAGAGGCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTGTGCATATGTGTTCACTTATGCACACATGTGCAAAGAGGCCTG  700

seq1  AAACTGACGTTAGATGTTTTCCTGGATCCATCTCCACTTTGTTTACTAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGACGTTAGATGTTTTCCTGGATCCATCTCCACTTTGTTTACTAGG  750

seq1  CAAGGCCTTTCAGTTGAACCCAGAACTCTTTCATAGTCTAATCTAGACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCTTTCAGTTGAACCCAGAACTCTTTCATAGTCTAATCTAGACTG  800

seq1  ACTGATTACTATTGGTATCTCCTGAGTATGCCTTCTCAGGAATTACAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATTACTATTGGTATCTCCTGAGTATGCCTTCTCAGGAATTACAGAC  850

seq1  AGCCACCATCCTAGCCTAGCCTTTATGTGGGTTCATCTTGATGAGCAGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCATCCTAGCCTAGCCTTTATGTGGGTTCATCTTGATGAGCAGTG  900

seq1  CCTCTCAAGTTGGTACAGCAAGTGCTTTATAGACTGATCCATTTCCTCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAAGTTGGTACAGCAAGTGCTTTATAGACTGATCCATTTCCTCAG  950

seq1  CCCCTGTAGAGACAACAATTAGTTACTCCATTAGCAAAGTTTAAATTGAG  1000
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCCCTGTAGAGACAAC-ATTAGTTACTCCATTAGCAAAGTTTAAATTGAG  999

seq1  TGTAAAATGAGCATTGCAAAGGATCTTATTAGACTTCACACATATATTTG  1050
      ||| ||||||||||||| |||||||||||||||||||||||| ||| |||
seq2  TGTTAAATGAGCATTGC-AAGGATCTTATTAGACTTCACACA-ATA-TTG  1046

seq1  TGACTGAAGGATTTCATTTAAATTTTGTTAAATCTACATTCTGTTTACAT  1100
      |||||||| |||||||||||||||||  |||||||| |||||| ||||||
seq2  TGACTGAAAGATTTCATTTAAATTTTTGTAAATCTA-ATTCTG-TTACAT  1094

seq1  GAAGTAAATAGTCCTTGATTCTGTCGAC  1128
      || ||||   ||| ||||||||||||||
seq2  GAGGTAATAGGTCTTTGATTCTGTCGAC  1122


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