BAC Information

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BAC

Clone NameB6Ng01-114E21
Chromosome5 (Build37)
Map Location 57,203,156 - 57,204,169
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100041335, LOC100041349, LOC666455, LOC625721, EG666465, Pcdh7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114E21.bB6Ng01-114E21.g
ACCDH919857DH919858
length1,1751,057
definitionDH919857|Mus musculus domesticus DNA, BAC clone: B6Ng01-114E21, 5' end.DH919858|Mus musculus domesticus DNA, BAC clone: B6Ng01-114E21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaattctaaggtgtcagtaatgtctcatcaaaatggtaaacac
taggacctttaggacagcccttaatgttttggaaaagagctctaaattca
gaagttcaaattatacataatttcttaactatgcaaaatataaggatata
atagtaattaccaatacaattacttagtatctaggtgcttcgtgaatcca
aacaacaaaggcagctacacttgaacccgcttaccagaaagatacaaagg
taggcagattcctgagttcaaggtcagtctaggacaaagtaaggttaagc
caaggtatagtagaaatggtactttcagggcagggtcccacccaactagt
ttgtcaccaatgctttatggaggcaagcacatatctgaattcttttgcaa
tgttaaaagaaactgtgtgtgttgctatctcctaaggatcaaagggctgg
gatcacatgatactgattctttgataatctaaaggaaaccaggagtaaaa
gactggattaatatgtagaataaaagactggatgtgtgagccattcggat
ttctttttaggattaaaagagaactgtttggagaaatgaccaacctagag
acacacagagacacaaagacaaacagacagagacacactcacaagcaagc
aggacagagagatttcttggagtagtgagcaagcagaatatagacaagga
aatctccagagagaatgcagaacataaagagaagcagatagaaaagctat
atttagcagaacacagatcatcattagcttgcatccacgattggatgagt
ccttccttttgctgcttccacacagcgctcttctcagaactcctctccat
gccaagacagaatagaaaaaagacagacacaccaccaagtgaacaaaagt
tcgagtcaggtaggttggtcacactctgaagaatgcctgcatctacagca
gctaagcatctatagcatgggggtgaggagttatccagtttcagcattgt
tctctgtttacaaatagtcagattctccttggcttccctacattatttga
aaatattttaatttactattttacaactaatggatgccagtgatttgtta
gagctgtttagattatcaattcattaatgccctaattagagatgttacaa
gggaaagctcaaagaatggatgcga
gaattctcctacattggtgcatcgagccttcacagggccaagggtctcac
ctcccactgatgcctgacaaggccatcctctgctacatatgagactggag
acatggattactccatgtgtactctgctttgtggttgattcgctggaagt
tcgggggtactggttcgtttatattggttgttcttcctatggagttgcaa
acccctttagctccttcaattctttctctaattcttccactggggacacc
aatggaggttggctgtgagtatctgcatctgtatttttcaggctctggca
gagcctgtcaggaaacagctatgtcaggctcctgtcagaaagcacttctt
ggtatccgcaataacgtctgagtttggtgactgtaaatgagatggatccc
caggtgggacagtctctggatggcttttccttcagactctgttccacact
ttgcctccttatttgtttctattttgtggaatactttgatgagtattggt
acttggtcttctttgatggtgtgatagaattctgcactaaccctgttttc
tttttcattctaattctcaccacaattaagaatattctttgatctctaat
aaaatgatctatagtgaggtctacctttgggaattgccttttttgagatt
tattttcagttttaattatatgtttacatgtgtgagagagcatggctatg
tgtgtatgtgtacagatccccatgttggtgagaatatttcattgcattcc
ctggagctatagttataggcaatcactagtcactcaaaatgggtgtggaa
attcacttgtggtcctctaagagaactgtatatgctcttggccttagcca
attaactagtccttgtgattttcttttaattcttactcccattcatgggt
tgcaggcacaataaacttctataaaataaagtacttaggttgaactcaga
taataggctaaattcttaaccacatctttcactacacttcatgatataag
tttaatattcccacagttttacatccttcccttctaacataccttattgt
tctacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_57203156_57204169
seq2: B6Ng01-114E21.g_115_1121

seq1  CTCCCACTGATGCCTGACAAGGCCATCCTCTGCTACATATGAGACTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACTGATGCCTGACAAGGCCATCCTCTGCTACATATGAGACTGGAG  50

seq1  ACATGGATTACTCCATGTGTACTCTGCTTTGTGGTTGATTCGCTGGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGATTACTCCATGTGTACTCTGCTTTGTGGTTGATTCGCTGGAAGT  100

seq1  TCGGGGGTACTGGTTCGTTTATATTGGTTGTTCTTCCTATGGAGTTGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGGGTACTGGTTCGTTTATATTGGTTGTTCTTCCTATGGAGTTGCAA  150

seq1  ACCCCTTTAGCTCCTTCAATTCTTTCTCTAATTCTTCCACTGGGGACACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTTAGCTCCTTCAATTCTTTCTCTAATTCTTCCACTGGGGACACC  200

seq1  AATGGAGGTTGGCTGTGAGTATCTGCATCTGTATTTTTCAGGCTCTGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGGTTGGCTGTGAGTATCTGCATCTGTATTTTTCAGGCTCTGGCA  250

seq1  GAGCCTGTCAGGAAACAGCTATGTCAGGCTCCTGTCAGAAAGCACTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGTCAGGAAACAGCTATGTCAGGCTCCTGTCAGAAAGCACTTCTT  300

seq1  GGTATCCGCAATAACGTCTGAGTTTGGTGACTGTAAATGAGATGGATCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCCGCAATAACGTCTGAGTTTGGTGACTGTAAATGAGATGGATCCC  350

seq1  CAGGTGGGACAGTCTCTGGATGGCTTTTCCTTCAGACTCTGTTCCACACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGGACAGTCTCTGGATGGCTTTTCCTTCAGACTCTGTTCCACACT  400

seq1  TTGCCTCCTTATTTGTTTCTATTTTGTGGAATACTTTGATGAGTATTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCCTTATTTGTTTCTATTTTGTGGAATACTTTGATGAGTATTGGT  450

seq1  ACTTGGTCTTCTTTGATGGTGTGATAGAATTCTGCACTAACCCTGTTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGTCTTCTTTGATGGTGTGATAGAATTCTGCACTAACCCTGTTTTC  500

seq1  TTTTTCATTCTAATTCTCACCACAATTAAGAATATTCTTTGATCTCTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATTCTAATTCTCACCACAATTAAGAATATTCTTTGATCTCTAAT  550

seq1  AAAATGATCTATAGTGAGGTCTACCTTTGGGAATTGCCTTTTTTGAGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGATCTATAGTGAGGTCTACCTTTGGGAATTGCCTTTTTTGAGATT  600

seq1  TATTTTCAGTTTTAATTATATGTTTACATGTGTGAGAGAGCATGGCTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCAGTTTTAATTATATGTTTACATGTGTGAGAGAGCATGGCTATG  650

seq1  TGTGTATGTGTACAGATCCCCATGTTGGTGAGAATATTTCATTGCATTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGTGTACAGATCCCCATGTTGGTGAGAATATTTCATTGCATTCC  700

seq1  CTGGAGCTATAGTTATAGGCAATCACTAGTCACTCAAAATGGGTGTGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCTATAGTTATAGGCAATCACTAGTCACTCAAAATGGGTGTGGAA  750

seq1  ATTCACTTGTGGTCCTCTAAGAGAACTGTATATGCTCTTGGCCCTTAGCC  800
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATTCACTTGTGGTCCTCTAAGAGAACTGTATATGCTCTTGG-CCTTAGCC  799

seq1  AATTAACTAGTCCTTGTGATTTTCTTTTAATTCTTACTCCCATTCATGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAACTAGTCCTTGTGATTTTCTTTTAATTCTTACTCCCATTCATGGG  849

seq1  TTGCAGGCACAATAAACTTCTATAAAATAAAGTACTTAGGTTTGAACTCA  900
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTGCAGGCACAATAAACTTCTATAAAATAAAGTACTTAGG-TTGAACTCA  898

seq1  GATAATAGGCTAAATTCTTAACCACATCTTTCACTACACTTCATGATTAT  950
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GATAATAGGCTAAATTCTTAACCACATCTTTCACTACACTTCATGA-TAT  947

seq1  AAGTTTAATTATTCACACATATTTTACAATCCTTCCCTTCTACCATACCT  1000
      |||||||| ||||| ||||  |||||| |||||||||||||| |||||| 
seq2  AAGTTTAA-TATTCCCACA-GTTTTAC-ATCCTTCCCTTCTAACATACC-  993

seq1  TTATGTTTCTACTA  1014
      ||||  ||||||||
seq2  TTATTGTTCTACTA  1007