BAC Information

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BAC

Clone NameB6Ng01-114L07
Chromosome5 (Build37)
Map Location 20,037,771 - 20,038,904
singlet/doubletsinglet
Overlap geneMagi2
Upstream genenone
Downstream geneLOC100041850, Phtf2, LOC622367, Tmem60, Rsbn1l, Ptpn12, EG626903, A530088I07Rik, Fgl2, AI847670, Fbxl13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114L07.bB6Ng01-114L07.g
ACCDH920159DH920160
length1,0251,133
definitionDH920159|Mus musculus domesticus DNA, BAC clone: B6Ng01-114L07, 5' end.DH920160|Mus musculus domesticus DNA, BAC clone: B6Ng01-114L07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagctctgttctccatttttttaattgggttatttggt
ttattgacctctagtttgacttctttatatattttggatatcagtcctct
gttgaatgtagagttagtgaaaatcttttccattttgtaggctgctgttt
tgtcctttggacagtgtcctttgtcttgcagaagcttttcagtttcataa
gatcccagttattaattattgatcttaacccctgagctgttagaaaaact
tgtcttctattccaatgcattcaaagatattctctagattctcttcttct
atcagatttagtgcatccagttttatgttgaagtgtttgatccacttaga
cttgagttttgcacggggtaataaataacggattaatttgtatttctgca
tgcagacattctttagaccagcaccatttgttgaagttgcttccttttct
ccagtgtatagtttccataaatttctaggctttcttttgattttgttgtt
attgaaatctagctttaatccatggtggtctgatagaatgtaggtagtaa
tttcagctttcttgttatctgttgagacttgctttgtgtctgagcatgtg
gtcaattttggagaatgttccatgaggtgctaagaagaaggtgtattgga
taaaatgtcctatagatatctgttaggtgcatttggttcataatgcctgt
tagttctattagatctctttgtagttttttctggatgacctaactatttg
gtgcggtattgaagtctcctactatcaatgtgtgagggtcaatgtgtgat
ttcagctttagtagtattttcttttttttttttttccatttttttatgag
gtatttacctcatttacatttccaatgctataccaaaagtccccataccc
actcaccccacttcctgcccacccactccccttttggcctggcgttccct
gtacgggggcaataagttgatgtcaatggcctcctttccagtgtgcctac
tagcctctttgatactatgcagata
gaattccaactccggtcccaacctgtcagttaccaatattctgtaggctg
ggagggatgtgagtgaccacagacacctgtcctttccagacatgctgtgg
gtgacagtaacgatccctttgccaatcccaccctcctgggactgtggtag
gggtcaaagttgaaactaaacatagtaaacttggaaacaagtagatcatt
gagttttaattcagcaagactggacttaaatggttttctgtacgggatcc
tggccaagctttcattcagatgtttttttttttttttttttttttttttt
aagctggcaaggatgagttcagctgcctcccattaaatacaacctataga
agcctagacaggataattggcttacctgaggtccagcaacagatcttggt
cagaaccaatgtatacttctaacaggggtatttggtttggaccatatcac
tttgggaacaaatcttgtaagtatcataaaaatcaaatataattttatgc
tcacaggggatttttcttctatttagtaaaaacccttaaatgtgtatttc
ttttttttattagatattttcttcatttacatttcaaatgctattccgaa
agttcccaataccctccccctgccctgttcccctacccacccattcccac
ttcttggccctggtgttcccctgtaccggggcatataaagtttgcaagac
caaggggtctctcttcccaatgatggctgactagaccatcttctgctaaa
atgtgtattttgaacttaatagaaacatttatataggaagagagttttct
tttcatccactatggtgaccttgctatgatataccaggtcccagtccaca
gttgtgtttaaaggcatagcatttaaaagtgatccgtttgatggcttttg
ggtgccatgtgggttacatttcaactgtgactttctccagtcctgattct
taatcctaagaacataaaaactaaaaagtaatatcattaagaaatcggat
ctagatgggtaacatccccccttgtccatatgggacctcaggaaatgcca
cccccttccatctttgctggggatttctaaatcccaatttgttttgcggg
gtgcctattactctctgtaaaccatgaagggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_20037771_20038904
seq2: B6Ng01-114L07.g_66_1198 (reverse)

seq1  GTCCCTTCAGTGGTTATACA-TGAGTAATACGCACACCAGCAAAACACAT  49
      ||||||||| ||||| ||||  |||||||| |||| || |||||||| ||
seq2  GTCCCTTCA-TGGTT-TACAGAGAGTAATAGGCAC-CCCGCAAAACAAAT  47

seq1  GTGGATATTAGAAAACCCCAGCAAAAGAT-GAAGGGGGGTGCATTTCCTG  98
        |||| ||||||| ||||||| |||||| ||||||||  ||||||||||
seq2  TGGGAT-TTAGAAATCCCCAGC-AAAGATGGAAGGGGGTGGCATTTCCTG  95

seq1  AGGTCCCATATTGACAA-GTGGGATGTTAACCCATCTTAGATCGTATTTC  147
      ||||||||||| ||||| | |||||||| ||||||| ||||||  |||||
seq2  AGGTCCCATATGGACAAGGGGGGATGTT-ACCCATC-TAGATCCGATTTC  143

seq1  -TAATGTATTTACTTTTTAGTTTTTATTGTCTTAAGATTAAGAATCAGGA  196
       |||||   ||||||||||||||||||  ||||| |||||||||||||||
seq2  TTAATGATATTACTTTTTAGTTTTTATGTTCTTAGGATTAAGAATCAGGA  193

seq1  CT-GAGAAAGTCACAGTTGAAATGT-ACCCACATGGCACCCAAAAGCCAT  244
      || |||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTGGAGAAAGTCACAGTTGAAATGTAACCCACATGGCACCCAAAAGCCAT  243

seq1  CAAACTGATCACTTTTAAATGCTATGCCTTTAAACACAACTGTGGACTGT  294
      ||||| ||||||||||||||||||||||||||||||||||||||||||| 
seq2  CAAACGGATCACTTTTAAATGCTATGCCTTTAAACACAACTGTGGACTGG  293

seq1  GACCTGGTATATCATAGCAAGGTCACCATAGTGGATGAAAAGAAAACTCT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGGTATATCATAGCAAGGTCACCATAGTGGATGAAAAGAAAACTCT  343

seq1  CTTCCTATATAAATGTTTCTATTAAGTTCAAAATACACATTTTAGCAGAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTATATAAATGTTTCTATTAAGTTCAAAATACACATTTTAGCAGAA  393

seq1  GATGGTCTAGTCAGCCATCATTGGGAAGAGAGACCCCTTGGTCTTGCAAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTCTAGTCAGCCATCATTGGGAAGAGAGACCCCTTGGTCTTGCAAA  443

seq1  CTTTATATGCCCCGGTACAGGGGAACACCAGGGCCAAGAAGTGGGAATGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATGCCCCGGTACAGGGGAACACCAGGGCCAAGAAGTGGGAATGG  493

seq1  GTGGGTAGGGGAACAGGGCAGGGGGAGGGTATTGGGAACTTTCGGAATAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTAGGGGAACAGGGCAGGGGGAGGGTATTGGGAACTTTCGGAATAG  543

seq1  CATTTGAAATGTAAATGAAGAAAATATCTAATAAAAAAAAGAAATACACA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAAATGTAAATGAAGAAAATATCTAATAAAAAAAAGAAATACACA  593

seq1  TTTAAGGGTTTTTACTAAATAGAAGAAAAATCCCCTGTGAGCATAAAATT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGGTTTTTACTAAATAGAAGAAAAATCCCCTGTGAGCATAAAATT  643

seq1  ATATTTGATTTTTATGATACTTACAAGATTTGTTCCCAAAGTGATATGGT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGATTTTTATGATACTTACAAGATTTGTTCCCAAAGTGATATGGT  693

seq1  CCAAACCAAATACCCCTGTTAGAAGTATACATTGGTTCTGACCAAGATCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCAAATACCCCTGTTAGAAGTATACATTGGTTCTGACCAAGATCT  743

seq1  GTTGCTGGACCTCAGGTAAGCCAATTATCCTGTCTAGGCTTCTATAGGTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTGGACCTCAGGTAAGCCAATTATCCTGTCTAGGCTTCTATAGGTT  793

seq1  GTATTTAATGGGAGGCAGCTGAACTCATCCTTGCCAGCTTAAAAAAAAAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTAATGGGAGGCAGCTGAACTCATCCTTGCCAGCTTAAAAAAAAAA  843

seq1  AAAAAAAAAAAAAAAAAACATCTGAATGAAAGCTTGGCCAGGATCCCGTA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAACATCTGAATGAAAGCTTGGCCAGGATCCCGTA  893

seq1  CAGAAAACCATTTAAGTCCAGTCTTGCTGAATTAAAACTCAATGATCTAC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAACCATTTAAGTCCAGTCTTGCTGAATTAAAACTCAATGATCTAC  943

seq1  TTGTTTCCAAGTTTACTATGTTTAGTTTCAACTTTGACCCCTACCACAGT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCCAAGTTTACTATGTTTAGTTTCAACTTTGACCCCTACCACAGT  993

seq1  CCCAGGAGGGTGGGATTGGCAAAGGGATCGTTACTGTCACCCACAGCATG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGAGGGTGGGATTGGCAAAGGGATCGTTACTGTCACCCACAGCATG  1043

seq1  TCTGGAAAGGACAGGTGTCTGTGGTCACTCACATCCCTCCCAGCCTACAG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAAGGACAGGTGTCTGTGGTCACTCACATCCCTCCCAGCCTACAG  1093

seq1  AATATTGGTAACTGACAGGTTGGGACCGGAGTTGGAATTC  1134
      ||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGGTAACTGACAGGTTGGGACCGGAGTTGGAATTC  1133