BAC Information

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BAC

Clone NameB6Ng01-116B05
Chromosome5 (Build37)
Map Location 69,289,163 - 69,290,334
singlet/doubletsinglet
Overlap genenone
Upstream geneEG330097, EG666977, AY616753
Downstream geneLOC666996, Kctd8, LOC545756, Yipf7, Guf1, Gnpda2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116B05.bB6Ng01-116B05.g
ACCDH921169DH921170
length1,2591,155
definitionDH921169|Mus musculus domesticus DNA, BAC clone: B6Ng01-116B05, 5' end.DH921170|Mus musculus domesticus DNA, BAC clone: B6Ng01-116B05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcatgggcccactgtcgtacttctctggctgtgaagtga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagataag
gcattctgtcagtccgtgaatggtggttttagcagaggcattacgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccatgaaggaagtggtccaatgtagtcaacctgccacca
ggttgctggttggtcacctcgaggaatggtgccatatctggggctcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagctgtagccagg
tcagccttggtgagtggaagcccgtgttgctgagcccaagcataacctcc
atctcgaccaccatgaccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagagaggctgattgtctacagaacgggtcatcttatcc
acttgattattgaattcctcctcggctgaagtcaccttttggtgagcatt
tacatgggacacaaatatcttcacatcctttgcccatttggagagatcta
tccacatacttcttccccagatgtctttctcaccaattttccaattgtga
tctttccaagtccctgaccatccagccaatccattggctacagcccatga
gtcagtgaataatcgtacatctggccatttcttcttgcaaacaaactgta
ataccatgtgtactgcccgaagttctgcccactgtgaagatttcccttca
cctgtgtctttcagggttgtcccagaaaggggttgtaatgctgcagctgt
ccacttctgggtggtgcctgcataacgtgcagagccatcagtaaaccagg
ctctagtcttctcctcttcggtcagtcgatcatagggaacaccccatgag
gctataggcacatgttggcagcagatggcattgtaacagagtagaaacca
taggcatttgagcactcttcatgtactgcttgtgcctcagacctgctctt
gcccgatcacgtataaaccacttccattgataataaactgctgctgtgcg
cgtcccacttatgacttgcagattgaaagaacccagctcatgatgggtag
tcaagtccgatagtactgtgtcctatgtccaacgctccgttcctagacat
gcaggctagcctctttcaaagaaatattgctccgcaatgagtgtagagct
gttgtctca
gaattcatcttaaagcttgtgatccaccctccatggaccttaggacagga
acttaaactggaacttggggccagaaactaatcagaagccacaatgcagc
gatccttacttgttgcttgtcatggcttcttcagcttaatttgtcactgg
actcagagccaccagcccaatagtggcactgtcttcagtgatctgggcct
tcccacatcaatcactaatctagaagatgtcacacacatttacccacaga
gacttcttttcaatcaagatccctcatccaggatgactaacttgtgtcag
gttgacaaaacactactcagaactatcactgcattctttttccctatatc
atatatgttgtgcaggatttcttcttacaaagatttaatggtatacatat
aaaggtaacatatttttaaatgaactatagtattatcaccattcaaaatt
atgtgtgtcatctaaatataacaattatacgtatcagaatcatttcagtt
tgtttgttcaaatcattaaaatttaaggagaagtagcatcttatgctagc
ctagctctctgagtttgacataaaaagatgataaatttcaccctggaaag
ataagattattttaaaaaataagatgatatcatttgaaaattacatgttg
ctgtacattataaaagaaatccataatttcaatatgacattccctgatta
gtcaagcatagaatatacatagttattgcaaatgagtttcctgaatatag
gaaattatgttttttcaatacagaaaacaataatatttttgagagaagtt
gattctctgaagacagttattgaaattgtctttactattgaaccgaaaag
attaaaaatggaagctgtcattaccattgtacccatacttataatttctt
tttaaaatttactatcacattagtgccatgttgatgacagtaggctttat
aaaattgtgtcataactgtataaccaatcaatgtctagtctaagcatatg
acaaatgaacataaagtacctaatcttaatttattattgtccatttcctt
aaacaacatttaaacacaatctataagtcattgcctcaatgctcgggttt
cttttttttctgtcttacgaacttaaggagagatatctaggtctactgaa
tttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_69289163_69290334
seq2: B6Ng01-116B05.g_69_1223 (reverse)

seq1  ATAAATTCAGTAGA-CTAG-GATCTCATCATTTAAGATCAGTAAGACAAG  48
      |||||||||||||| ||||  |||||  |  ||||| || |||||||   
seq2  ATAAATTCAGTAGACCTAGATATCTCTCC--TTAAGTTC-GTAAGAC---  44

seq1  GAAAAAAAAAAGAAACACGAGCATTTGAGCAATGAAAAATTATAGGATGT  98
       | ||||||||||||| ||||||||   ||||||   | ||||||  |||
seq2  -AGAAAAAAAAGAAACCCGAGCATTGAGGCAATG---ACTTATAGATTGT  90

seq1  GTTTTAAATGTTGTTTAGGGAAATGGACAAATAATAAATTTTAAGATTAG  148
      | ||||||||||||||| |||||||||| |||||||||  ||||||||||
seq2  G-TTTAAATGTTGTTTAAGGAAATGGAC-AATAATAAA--TTAAGATTAG  136

seq1  GTACTTTATGTTCATTTGTCATATGCCTTAGACTAGACATTGATTGGTTT  198
      ||||||||||||||||||||||||| ||||||||||||||||||||| ||
seq2  GTACTTTATGTTCATTTGTCATATG-CTTAGACTAGACATTGATTGG-TT  184

seq1  ATACAGTTATGACACAATTTTTATAAAGCCTACTGTCATCAACATGGCAC  248
      ||||||||||||||||| ||||||||||||||||||||||||||||||| 
seq2  ATACAGTTATGACACAA-TTTTATAAAGCCTACTGTCATCAACATGGCA-  232

seq1  CTAATGTGATAGTAAATTTTAAAAAGAAATTATAAGTATGGGTACAATGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTGATAGTAAATTTTAAAAAGAAATTATAAGTATGGGTACAATGG  282

seq1  TAATGACAGCTTCCATTTTTAATCTTTTCGGTTCAATAGTTAAAGACAAT  348
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TAATGACAGCTTCCATTTTTAATCTTTTCGGTTCAATAG-TAAAGACAAT  331

seq1  TTCAATAACTGTCTTCAGAGAATCAACTTCTCTCAAAAATATTATTGTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAACTGTCTTCAGAGAATCAACTTCTCTCAAAAATATTATTGTTT  381

seq1  TCTGTATTGAAAAAACATAATTTCCTATATTCAGGAAACTCATTTGCAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATTGAAAAAACATAATTTCCTATATTCAGGAAACTCATTTGCAAT  431

seq1  AACTATGTATATTCTATGCTTGACTAATCAGGGAATGTCATATTGAAATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGTATATTCTATGCTTGACTAATCAGGGAATGTCATATTGAAATT  481

seq1  ATGGATTTCTTTTATAATGTACAGCAACATGTAATTTTCAAATGATATCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATTTCTTTTATAATGTACAGCAACATGTAATTTTCAAATGATATCA  531

seq1  TCTTATTTTTTAAAATAATCTTATCTTTCCAGGGTGAAATTTATCATCTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTTTTTAAAATAATCTTATCTTTCCAGGGTGAAATTTATCATCTT  581

seq1  TTTATGTCAAACTCAGAGAGCTAGGCTAGCATAAGATGCTACTTCTCCTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTCAAACTCAGAGAGCTAGGCTAGCATAAGATGCTACTTCTCCTT  631

seq1  AAATTTTAATGATTTGAACAAACAAACTGAAATGATTCTGATACGTATAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTAATGATTTGAACAAACAAACTGAAATGATTCTGATACGTATAA  681

seq1  TTGTTATATTTAGATGACACACATAATTTTGAATGGTGATAATACTATAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATATTTAGATGACACACATAATTTTGAATGGTGATAATACTATAG  731

seq1  TTCATTTAAAAATATGTTACCTTTATATGTATACCATTAAATCTTTGTAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTAAAAATATGTTACCTTTATATGTATACCATTAAATCTTTGTAA  781

seq1  GAAGAAATCCTGCACAACATATATGATATAGGGAAAAAGAATGCAGTGAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAATCCTGCACAACATATATGATATAGGGAAAAAGAATGCAGTGAT  831

seq1  AGTTCTGAGTAGTGTTTTGTCAACCTGACACAAGTTAGTCATCCTGGATG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGAGTAGTGTTTTGTCAACCTGACACAAGTTAGTCATCCTGGATG  881

seq1  AGGGATCTTGATTGAAAAGAAGTCTCTGTGGGTAAATGTGTGTGACATCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATCTTGATTGAAAAGAAGTCTCTGTGGGTAAATGTGTGTGACATCT  931

seq1  TCTAGATTAGTGATTGATGTGGGAAGGCCCAGATCACTGAAGACAGTGCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGATTAGTGATTGATGTGGGAAGGCCCAGATCACTGAAGACAGTGCC  981

seq1  ACTATTGGGCTGGTGGCTCTGAGTCCAGTGACAAATTAAGCTGAAGAAGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTGGGCTGGTGGCTCTGAGTCCAGTGACAAATTAAGCTGAAGAAGC  1031

seq1  CATGACAAGCAACAAGTAAGGATCGCTGCATTGTGGCTTCTGATTAGTTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACAAGCAACAAGTAAGGATCGCTGCATTGTGGCTTCTGATTAGTTT  1081

seq1  CTGGCCCCAAGTTCCAGTTTAAGTTCCTGTCCTAAGGTCCATGGAGGGTG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCCCAAGTTCCAGTTTAAGTTCCTGTCCTAAGGTCCATGGAGGGTG  1131

seq1  GATCACAAGCTTTAAGATGAATTC  1172
      ||||||||||||||||||||||||
seq2  GATCACAAGCTTTAAGATGAATTC  1155