BAC Information

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BAC

Clone NameB6Ng01-118A06
Chromosome5 (Build37)
Map Location 61,022,568 - 61,023,729
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546866, Cbfa2t2-ps1
Downstream geneLOC100041498, LOC666597, EG666610
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118A06.bB6Ng01-118A06.g
ACCDH922607DH922608
length1,1501,240
definitionDH922607|Mus musculus domesticus DNA, BAC clone: B6Ng01-118A06, 5' end.DH922608|Mus musculus domesticus DNA, BAC clone: B6Ng01-118A06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtgtctgttcagattcctaagtgcattatctctctaagggtgt
atcaaatcatcctactttttatatgttctattattttatgccaataccta
gactgttaacagcacatttatggagactaaaaggaaggtattgacagccc
cattcagtaagcataagaaatatgacttcaataagggagagtaccttaat
tttattcaggaaagcttttaaagtaaatcaaactgttatttaaataaagt
caataaaatctattgaatttattatagaaatgtttatttctcacataaag
gcaacctctaaagagttgacattatttgaaacaaaatgcccgagtggtat
tcatgactgatgattttaatcaagaattcatttgcccaggaagcttctca
ttttccccactttcagatcaatagggcaacgtgtcacttccaaactgtac
ttactgggagttaggactaatttcatgttgcagtaaaatcttcattgaat
ttcctgcattttcccctgcacctatttattttcttctatattatatgtgc
aggaacatatgctcagctagcctcttcaactttagtgctccaggcagaag
gaaaagatggtcttaaaacatttttttttactcttcctgctcaattctct
catgaattgaattcacctgcctgaaaatagatcacagtatattaaattaa
ccttgctattttatttctacttgctctaggaaataaatattaaagctgaa
gtaaatttatctacttcccttgctttctttcatgactccaagtcaaggct
tctcgtcatactgctctgtttgagcaaattttgtacattatcatttaatt
taacatttatgatttatattacatatataattttttgtatattgtatatg
tcaatttctcttaaattacatatactttataaacattatgaaatgagtta
taagtaccatgggaaattagtagatttgtttgcccttcacatttcaatat
atgtatcacatagacttgatatatactagcacttattactgatgcatctt
tagagatgtatcgatacagtacacctcttatttattacatgctttatgaa
atattttttgttctaaatattttacttaacaggataaatggagaattata

gaattcttcccccacctgatagtcaatcagcttatgtgccaaaaaacggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt
caggacccaggaagcagtcagagaggcgacccaggaagacccacaagggt
ggacctgcgtgccgcctccgacttcctattaatgcctcaaatgagtattc
agccggtgccagtggagcctataccatccttgcccccgggaaccatgggc
cttattctcggccggggttcactcaccttgcagggcttagtagtccaccc
tggagttatggattgtcaacattcccctgaaatacaggtcctgtgctcaa
gccctaaaggcgttttttctattagtaaaggagataggatagctcagctg
ctgctcctccctgataataccagggagaaatttgcaggacctgagataaa
gaaaatgggctcctcaggaaatgattctgcctatttggttgtatctttga
atgatagacctaagctccgccttaagatcaacggaaaagagtttgaaggc
atccttgataccggagcagataaaagtataatttctacacattggtggcc
caaagcatggcccaccacagagtcatctcattcattacagggcctaggat
atcaatcatgtcccactataagctccgttgccttgacgtgggaatcctct
gaaggacagcaagggaaattcataccttatgtgctcccactcccggttaa
cctctggggaagggatattatgcagcatttgggccttattttgtccaatg
aaaacgccccatcaggagggtattcagctaaagcaaaaatatcatggcaa
agatgggttataaagaacgaaaagggttaggacatcaagaacagggaagg
atagagcctatctacctaatggaaaccagacagacagggtctgggtttcc
atagcggccattggggcagcacgactcataccatgaaaacagggacccag
tgtgggtctcatgcactattcctctgaaaactgagctgtgatcactgtag
aggaacaattaaactagcatattgagccctctacctcacttgaatctcca
attttgattaagaaaagtcagaagtgaactgtctcatgaccagcatatga
caatgaactattgccagacagaagtcatgctgtatcacgcatgatcctgt
ccgatacatatggttattatgtgcaccatacatcgcacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_61022568_61023729
seq2: B6Ng01-118A06.b_46_1195

seq1  GAATTCAGTGTCTGTTCAGATTCCTAAGTGCATTATCTCTCTAAGGGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTCTGTTCAGATTCCTAAGTGCATTATCTCTCTAAGGGTGT  50

seq1  ATCAAATCATCCTACTTTTTATATGTTCTATTATTTTATGCCAATACCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATCATCCTACTTTTTATATGTTCTATTATTTTATGCCAATACCTA  100

seq1  GACTGTTAACAGCACATTTATGGAGACTAAAAGGAAGGTATTGACAGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTTAACAGCACATTTATGGAGACTAAAAGGAAGGTATTGACAGCCC  150

seq1  CATTCAGTAAGCATAAGAAATATGACTTCAATAAGGGAGAGTACCTTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGTAAGCATAAGAAATATGACTTCAATAAGGGAGAGTACCTTAAT  200

seq1  TTTATTCAGGAAAGCTTTTAAAGTAAATCAAACTGTTATTTAAATAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCAGGAAAGCTTTTAAAGTAAATCAAACTGTTATTTAAATAAAGT  250

seq1  CAATAAAATCTATTGAATTTATTATAGAAATGTTTATTTCTCACATAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAATCTATTGAATTTATTATAGAAATGTTTATTTCTCACATAAAG  300

seq1  GCAACCTCTAAAGAGTTGACATTATTTGAAACAAAATGCCCGAGTGGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTCTAAAGAGTTGACATTATTTGAAACAAAATGCCCGAGTGGTAT  350

seq1  TCATGACTGATGATTTTAATCAAGAATTCATTTGCCCAGGAAGCTTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACTGATGATTTTAATCAAGAATTCATTTGCCCAGGAAGCTTCTCA  400

seq1  TTTTCCCCACTTTCAGATCAATAGGGCAACGTGTCACTTCCAAACTGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCCACTTTCAGATCAATAGGGCAACGTGTCACTTCCAAACTGTAC  450

seq1  TTACTGGGAGTTAGGACTAATTTCATGTTGCAGTAAAATCTTCATTGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGGAGTTAGGACTAATTTCATGTTGCAGTAAAATCTTCATTGAAT  500

seq1  TTCCTGCATTTTCCCCTGCACCTATTTATTTTCTTCTATATTATATGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCATTTTCCCCTGCACCTATTTATTTTCTTCTATATTATATGTGC  550

seq1  AGGAACATATGCTCAGCTAGCCTCTTCAACTTTAGTGCTCCAGGCAGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACATATGCTCAGCTAGCCTCTTCAACTTTAGTGCTCCAGGCAGAAG  600

seq1  GAAAAGATGGTCTTAAAACATTTTTTTTTACTCTTCCTGCTCAATTCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGATGGTCTTAAAACATTTTTTTTTACTCTTCCTGCTCAATTCTCT  650

seq1  CATGAATTGAATTCACCTGCCTGAAAATAGATCACAGTATATTAAATTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATTGAATTCACCTGCCTGAAAATAGATCACAGTATATTAAATTAA  700

seq1  CCTTGCTATTTTATTTCTACTTGCTCTAGGAAATAAATATTAAAGCTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCTATTTTATTTCTACTTGCTCTAGGAAATAAATATTAAAGCTGAA  750

seq1  GTAAATTTATCTACTTCCCTTGCTTTCTTTCATGACTCCAAGTCAAGGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTTATCTACTTCCCTTGCTTTCTTTCATGACTCCAAGTCAAGGCT  800

seq1  TCTCGTCATACTGCTCTGTTTGAGCAAATTTTGTACATTATCATTTAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGTCATACTGCTCTGTTTGAGCAAATTTTGTACATTATCATTTAATT  850

seq1  TAACATTTATGATTTATATTACATATATAATTTTTTGTATATTGTATATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTTATGATTTATATTACATATATAATTTTTTGTATATTGTATATG  900

seq1  TCAATTTCTCTTAAATTACATATACTTTATAAAACATTATGAAATGAGTT  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCAATTTCTCTTAAATTACATATACTTTAT-AAACATTATGAAATGAGTT  949

seq1  ATAAGTACCATGGGAAATTAGTAGATTTGTTTGCCCTTCACATTTCAAAT  1000
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATAAGTACCATGGGAAATTAGTAGATTTGTTTGCCCTTCACATTTC-AAT  998

seq1  ATATGTAATCAACATAAGACTTGATATATACTAGGCACTTATTACTGAAT  1050
      |||||| ||| |||| ||||||||||||||||| ||||||||||||| ||
seq2  ATATGT-ATC-ACAT-AGACTTGATATATACTA-GCACTTATTACTG-AT  1043

seq1  GCAATCTTTAGAGATGTATCGATACAAGTACACCTCTTAATTTAATTACA  1100
      || |||||||||||||||||||||| |||||||||||||  || ||||| 
seq2  GC-ATCTTTAGAGATGTATCGATAC-AGTACACCTCTTA--TTTATTAC-  1088

seq1  ATGCTTTATGAAATA-TTTTTGTTCTTAAAATATTTTAC-TAACAGGATA  1148
      ||||||||||||||| ||||||||||  ||||||||||| ||||||||||
seq2  ATGCTTTATGAAATATTTTTTGTTCT--AAATATTTTACTTAACAGGATA  1136

seq1  AATGGAGAATTATA  1162
      ||||||||||||||
seq2  AATGGAGAATTATA  1150