BAC Information

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BAC

Clone NameB6Ng01-119F22
Chromosome5 (Build37)
Map Location 8,554,636 - 8,555,179
singlet/doubletsinglet
Overlap geneGm440
Upstream geneLOC667767, EG546855, Steap4, Sri, LOC433840, Adam22, Dbf4, Slc25a40
Downstream geneAbcb1a, EG330031, Abcb1b, Abcb4, Crot, 4930420K17Rik, Dmtf1, LOC654361, 9330182L06Rik, Grm3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119F22.bB6Ng01-119F22.g
ACCDH923600DH923601
length1,176919
definitionDH923600|Mus musculus domesticus DNA, BAC clone: B6Ng01-119F22, 5' end.DH923601|Mus musculus domesticus DNA, BAC clone: B6Ng01-119F22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgggctatctaatggctgagaagcacttaaaaatgttca
acacctttagttatcaaggaaattcaaaccaaaacaacccttagattcaa
cctcacaccagtaagaatggctaagatcaaaaactcaggtcacagcagat
gctggcaaggatgtggagaaagaggaacactccttcattgctggtgggat
tgcaagctggtacaaccacttgagaaatctgtttggtggttcctcagaaa
attggacataatactacctgaggacccaggtataacactcctgggcatat
acccagaatgtgctccaacatgtaataaggacacatgctccactatgttc
atagaagccttatttataataggcaggagctgaaaagaatccagatgttc
ttcaacagacgaatggacagaaaatatgatacatttacacagtggagtac
tactcagctattaaaaatgataaattcatgaaattcttaggcaaatggat
agaactagaaaatatcatcttgagtgaggtaacatagtcacaaaacaaca
cacatggtatgcactcactgataagtggacattagcccaaaacctccaaa
tagccaagatacaattcacagaccacatgaagcttaagaagaaggaagac
caaattgtgggtgttttgtcccttcttaaaaggagaacaaaaatactcat
aggaacaaatatgtagataaagtgtagagtagagactgaagaaaaggtca
tccagagactgtcccatctggagatttatcccataaatagttaccaagct
cagacattatagtgtatgccaagaagtgtatgttgaaaggagcctgatat
gactgtcccctgagaggccctgccagagccttacaaatatagatgtggat
gcttgtagccaacctctggattgagtacagggtccctaatagaggaatta
gaaaatgactgaaggagttgaaggggtttgcaacccccttatgaagaaca
tatacaccagaaccccagagctcccagggactagcatcacaaaggagtac
acctgctccagctgcatatgtagcagaagaaagcttgacatgcatcattt
gagtcctatgaagctcatagatgcctagtataggaatcgggtgccaggat
tgggatgtgattggatttgcttaagg
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcgattagcgagaattttattaagaatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgattgtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
tttctgccgtctactcctcttgggtgaatttgcttccttttttttctaga
gctttagatgtgttgtcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_8554636_8555179
seq2: B6Ng01-119F22.g_66_609 (reverse)

seq1  AATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTAAAGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTAAAGAAAT  50

seq1  AGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGGACCAGACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGGACCAGACG  100

seq1  GGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAACTCCAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAACTCCAGTT  150

seq1  CTGCACAAACTTTTTCACAAGATAGAAGTAGAAGGTATTCTACCCAACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACAAACTTTTTCACAAGATAGAAGTAGAAGGTATTCTACCCAACTC  200

seq1  ATTTTATGAAGCCACTATTACTCTGATACCTAAACCACAGAAAGATCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATGAAGCCACTATTACTCTGATACCTAAACCACAGAAAGATCCAA  250

seq1  CAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAACATCGATGCAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAACATCGATGCAAAA  300

seq1  ATTCTTAATAAAATTCTCGCTAACCGAATCCAAGAACACATTAAAGCAAT  350
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATTCTTAATAAAATTCTCGCTAATCGAATCCAAGAACACATTAAAGCAAT  350

seq1  CATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGGTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGGTTTA  400

seq1  ATATACGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAAAGAC  450

seq1  AAAAACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAAGAT  500

seq1  CCAACACCCATTCATGATAAAAGTTCTGGAAAGATCAGGAATTC  544
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACCCATTCATGATAAAAGTTCTGGAAAGATCAGGAATTC  544