BAC Information

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BAC

Clone NameB6Ng01-120D23
Chromosome5 (Build37)
Map Location 127,384,622 - 127,511,194
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039178, LOC665760, LOC100040327
Downstream geneTmem132c, Slc15a4, Glt1d1, Tmem132d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120D23.bB6Ng01-120D23.g
ACCDH924241DH924242
length1,016217
definitionDH924241|Mus musculus domesticus DNA, BAC clone: B6Ng01-120D23, 5' end.DH924242|Mus musculus domesticus DNA, BAC clone: B6Ng01-120D23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,510,178 - 127,511,194)(127,384,622 - 127,384,838)
sequence
gaattctctgttgctgccggagactgcatgagtctgtatagataatggga
acagtcatgatttggaggcctgtgagagtcataatgatgcttcatagaag
gtcctactatggttgccatagcgacagaactgaatttatgttgcctagcc
atggaggatctaggagggcagtgagtgggacatgggtgatcgttcagggt
agatttgtgtaagaattatcttgttgggcatggcagtgcacataccttta
atggcagcacttgggaggcagagacaggcaaatctctgtgagtttgaggc
cagcctggtctacatagtgagactgtgtctcttaaaaaaaaaagcctcga
tcatgtgatgatttgggagcatatgaatgtcataatggtaaaatggttac
tttatgtctaaaattccttggtacagatactaaaatgttatctataagaa
tattttataagaattaactcaatagttcccatatcccacccacatcaggt
gattcacagtcttctgtttttccagttctagtggatcaaatgcctcagga
ctctcagggtacacacacgcacacacgcacgcacacacaccatgtgaaat
gggaaaaaaacaaatcttttaaaatattttgcagaaatctaaatggttct
cgaagacatatttttgattgtgggacacactcacaaagaaatataaaata
gttcagttaatttcaaggtccacctacaagtcacaggaaaaagtactctt
aagttaagctatagccatagtttcttttattattttgacaaattctgata
gaagcaatgtaaaatgtgggtattggtaacagttccatgaccaagttaaa
ttaagaagctcatgtttctaaagtcagaagctatggaagttcacacaggc
agggattaaaaccacattataattctatagcttagagaaaatcatttcag
gagagggaaacaaaacctaaatagtttaaattatgtttctgtgtatgggg
atggggggttggggaa
agagagagacttgcaaattaaaatacataataaagagaagggatatgatt
cagggtaaattgcacttgcctaacctagctgaggccctgggttcttccca
accctgcactttgaatgaagccccaataaatagcaaaataatcagagagg
cacatgtgctacagtgttttaaaagtttttatttaatctatgggtataca
tgtgtgcagtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_127510178_127511194
seq2: B6Ng01-120D23.b_47_1061 (reverse)

seq1  TCCCCA--CCCCCATCCCAATACACAGAAACATAATTTAAACTATTTTAG  48
      ||||||  |||||||||| ||||||||||||||||||||||||| |||||
seq2  TCCCCAACCCCCCATCCCCATACACAGAAACATAATTTAAACTA-TTTAG  49

seq1  GTTTTGTTTCCCTCTTCCTGAAATGATTTTTCTCTAAGCTATAGAATTAT  98
      |||||||||||||| ||||||||||| |||||||||||||||||||||||
seq2  GTTTTGTTTCCCTC-TCCTGAAATGA-TTTTCTCTAAGCTATAGAATTAT  97

seq1  AATTGTGGTTTTAATCCCTGCCTGTGTGAACTTCCATAGCTTCTGACTTT  148
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AA-TGTGGTTTTAATCCCTGCCTGTGTGAACTTCCATAGCTTCTGACTTT  146

seq1  AGAAACATGAGCTTCTTAATTTAACTTGGTCATGGAACTGTTACCAATAC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACATGAGCTTCTTAATTTAACTTGGTCATGGAACTGTTACCAATAC  196

seq1  CCACATTTTACATTGCTTCTATCAGAATTTGTCAAAATAATAAAAGAAAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTTTACATTGCTTCTATCAGAATTTGTCAAAATAATAAAAGAAAC  246

seq1  TATGGCTATAGCTTAACTTAAGAGTACTTTTTCCTGTGACTTGTAGGTGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTATAGCTTAACTTAAGAGTACTTTTTCCTGTGACTTGTAGGTGG  296

seq1  ACCTTGAAATTAACTGAACTATTTTATATTTCTTTGTGAGTGTGTCCCAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGAAATTAACTGAACTATTTTATATTTCTTTGTGAGTGTGTCCCAC  346

seq1  AATCAAAAATATGTCTTCGAGAACCATTTAGATTTCTGCAAAATATTTTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAAATATGTCTTCGAGAACCATTTAGATTTCTGCAAAATATTTTA  396

seq1  AAAGATTTGTTTTTTTCCCATTTCACATGGTGTGTGTGCGTGCGTGTGTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTTGTTTTTTTCCCATTTCACATGGTGTGTGTGCGTGCGTGTGTG  446

seq1  CGTGTGTGTACCCTGAGAGTCCTGAGGCATTTGATCCACTAGAACTGGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGTGTACCCTGAGAGTCCTGAGGCATTTGATCCACTAGAACTGGAA  496

seq1  AAACAGAAGACTGTGAATCACCTGATGTGGGTGGGATATGGGAACTATTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAAGACTGTGAATCACCTGATGTGGGTGGGATATGGGAACTATTG  546

seq1  AGTTAATTCTTATAAAATATTCTTATAGATAACATTTTAGTATCTGTACC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATTCTTATAAAATATTCTTATAGATAACATTTTAGTATCTGTACC  596

seq1  AAGGAATTTTAGACATAAAGTAACCATTTTACCATTATGACATTCATATG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATTTTAGACATAAAGTAACCATTTTACCATTATGACATTCATATG  646

seq1  CTCCCAAATCATCACATGATCGAGGCTTTTTTTTTTAAGAGACACAGTCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAAATCATCACATGATCGAGGCTTTTTTTTTTAAGAGACACAGTCT  696

seq1  CACTATGTAGACCAGGCTGGCCTCAAACTCACAGAGATTTGCCTGTCTCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGTAGACCAGGCTGGCCTCAAACTCACAGAGATTTGCCTGTCTCT  746

seq1  GCCTCCCAAGTGCTGCCATTAAAGGTATGTGCACTGCCATGCCCAACAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCCAAGTGCTGCCATTAAAGGTATGTGCACTGCCATGCCCAACAAG  796

seq1  ATAATTCTTACACAAATCTACCCTGAACGATCACCCATGTCCCACTCACT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCTTACACAAATCTACCCTGAACGATCACCCATGTCCCACTCACT  846

seq1  GCCCTCCTAGATCCTCCATGGCTAGGCAACATAAATTCAGTTCTGTCGCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCCTAGATCCTCCATGGCTAGGCAACATAAATTCAGTTCTGTCGCT  896

seq1  ATGGCAACCATAGTAGGACCTTCTATGAAGCATCATTATGACTCTCACAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAACCATAGTAGGACCTTCTATGAAGCATCATTATGACTCTCACAG  946

seq1  GCCTCCAAATCATGACTGTTCCCATTATCTATACAGACTCATGCAGTCTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCAAATCATGACTGTTCCCATTATCTATACAGACTCATGCAGTCTC  996

seq1  CGGCAGCAACAGAGAATTC  1017
      |||||||||||||||||||
seq2  CGGCAGCAACAGAGAATTC  1015

seq1: chr5_127384622_127384838
seq2: B6Ng01-120D23.g_71_287

seq1  AGAGAGAGACTTGCAAATTAAAATACATAATAAAGAGAAGGGATATGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGACTTGCAAATTAAAATACATAATAAAGAGAAGGGATATGATT  50

seq1  CAGGGTAAATTGCACTTGCCTAACCTAGCTGAGGCCCTGGGTTCTTCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTAAATTGCACTTGCCTAACCTAGCTGAGGCCCTGGGTTCTTCCCA  100

seq1  ACCCTGCACTTTGAATGAAGCCCCAATAAATAGCAAAATAATCAGAGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGCACTTTGAATGAAGCCCCAATAAATAGCAAAATAATCAGAGAGG  150

seq1  CACATGTGCTACAGTGTTTTAAAAGTTTTTATTTAATCTATGGGTATACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTGCTACAGTGTTTTAAAAGTTTTTATTTAATCTATGGGTATACA  200

seq1  TGTGTGCAGTGTGTGTG  217
      |||||||||||||||||
seq2  TGTGTGCAGTGTGTGTG  217