BAC Information

Click to search

BAC

Clone NameB6Ng01-120F17
Chromosome5 (Build37)
Map Location 131,999,959 - 132,000,472
singlet/doubletsinglet
Overlap geneAuts2
Upstream geneCaln1, Wbscr17
Downstream gene4930563F08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120F17.bB6Ng01-120F17.g
ACCDH924321DH924322
length5141,183
definitionDH924321|Mus musculus domesticus DNA, BAC clone: B6Ng01-120F17, 5' end.DH924322|Mus musculus domesticus DNA, BAC clone: B6Ng01-120F17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattcttgaattcaccagggagaacctgggcctgaatttgtact
ttttcgatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtg
ggaatggaacatgaatagcatatctttgatgtatctgatgtatgtttaga
gattgtcacatatgtggcagtaacagggtctctcatttgtcacctcaggt
gtcaggctagctgcccaggagctttcaagggttctgtctctgcctctctt
ctcaccacaggagccctgggattatggacacgctgctccatatatctctg
tatgacttctgggggtcgcaaatcagatcctcaaagctgctgggcaagcg
ctttaccttttcggttgaccggttggttggtttttgttttgttttggagt
cagggtctgtcacctagggcttaccaagattaggctagtctgactggcta
gttaggccccaaggagtctgtgttccacctccccataactgtgatcacaa
gcctgtgccaccat
gaattcaatgaaaattaaagcagaacatacccatacttgtgggacacaat
gaaagcagtgctcagaggaaagtccatagcactaagtgccttcataaaca
aattagaaagtccacatatcagcaatttaaaagtacatctgaaagctcta
gaagaaaagaagaaaaagaagcaaaaacacccaagaggagtagacaagag
gaaataatcagactcagaccagaaatcagtcaataagaaacaaagaaaac
aatacaaagaaccaaggaaaacaagagctttctttgagaaagtcagcgag
atagggaaacccttagccaaactaacaaaaagacagagagacagtattca
aataaacaaaatcagaaatgaaaaggaagaatataacaacagacaatgaa
gaaattttaaaaaccattaggtcttacttcaaacacctatactccacaaa
tttggaaaatctaaataaagtggatgattttctagatagctatcactcat
caaagttaaatcaagaccaaataaactatttaaacagtcctataatccct
aagtaaataaaagaagtcattaaaagtctcccaaccaaaaaaaaaaggcc
agatggttttagtgcaaatccttccagattttcaaagaagagctaagatc
aacactctttaacatattccacaaaagtagactgtgccaaactcatccta
tgagaccacagtcaccctgataactaaaccacacaaagactcaacagaga
agagaatttcagaccaatttatgaatattgatgcaaaatactcaataaaa
tactcgtaagttgaatccaagaacaaaatcaaaactatcatccgccatga
tcaagcagacttcatctcatattatgcagggatagttcaatatatgaatc
catcaatgtatcaatccatcataataaacaaactgaaaaaaaaatcacat
ggtcatctcattagatgctgacaaagcttttgacaaatctacaacacgga
cttctcatgacaaagtcttgagagatcaggatacaagccatacttaaata
caagcaatcttacaggcagccaacatcaatgatgaagaacttaaacagtc
ctaagtcagaacagacagcgtgcatctccgatctatcaattagattggaa
tcggcttgagtatagaaaccaagcattcagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_131999959_132000472
seq2: B6Ng01-120F17.b_45_558 (reverse)

seq1  ATGGTGGCACAGGCTTGTGATCACAGTTCTGGGGAGGTGGAACACAGACT  50
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATGGTGGCACAGGCTTGTGATCACAGTTATGGGGAGGTGGAACACAGACT  50

seq1  CCTTGGGGCCTAACTAGCCAGTCAGACTAGCCTAATCTTGGTAAGCCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGGCCTAACTAGCCAGTCAGACTAGCCTAATCTTGGTAAGCCCTA  100

seq1  GGTGACAGACCCTGACTCCAAAACAAAACAAAAACCAACCAACCGGTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACAGACCCTGACTCCAAAACAAAACAAAAACCAACCAACCGGTCAA  150

seq1  CCGAAAAGGTAAAGCGCTTGCCCAGCAGCTCTGAGGATCTGATTTGCGAC  200
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCGAAAAGGTAAAGCGCTTGCCCAGCAGCTTTGAGGATCTGATTTGCGAC  200

seq1  CCCCAGAAGTCATACAGAGATATATGGAGCAGCGTGTCCATAATCCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGAAGTCATACAGAGATATATGGAGCAGCGTGTCCATAATCCCAGG  250

seq1  GCTCCTGTGGTGAGAAGAGAGGCAGAGACAGAACCCTTGAAAGCTCCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGTGGTGAGAAGAGAGGCAGAGACAGAACCCTTGAAAGCTCCTGG  300

seq1  GCAGCTAGCCTGACACCTGAGGTGACAAATGAGAGACCCTGTTACTGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTAGCCTGACACCTGAGGTGACAAATGAGAGACCCTGTTACTGCCA  350

seq1  CATATGTGACAATCTCTAAACATACATCAGATACATCAAAGATATGCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTGACAATCTCTAAACATACATCAGATACATCAAAGATATGCTAT  400

seq1  TCATGTTCCATTCCCACCACACACACACACACACACACACACACACACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTCCATTCCCACCACACACACACACACACACACACACACACACAC  450

seq1  ACACACATCGAAAAAGTACAAATTCAGGCCCAGGTTCTCCCTGGTGAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATCGAAAAAGTACAAATTCAGGCCCAGGTTCTCCCTGGTGAATT  500

seq1  CAAGAATTGAATTC  514
      ||||||||||||||
seq2  CAAGAATTGAATTC  514