BAC Information

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BAC

Clone NameB6Ng01-120G08
Chromosome5 (Build37)
Map Location 150,923,644 - 151,125,173
singlet/doubletdoublet
Overlap geneLOC667470, Fry
Upstream geneEG667410, LOC100040006, Uspl1, 2310047D07Rik, Alox5ap, 6330406I15Rik, 4930588N13Rik, LOC100040037, LOC100040062, 4930434E21Rik, Hsp110, EG433968, B3galtl, LOC100040089, Rxfp2
Downstream geneLOC100042068, Gm5, XM_359419, Brca2, B230342M21Rik, BC037393, Aprin, LOC100040180, Kl, LOC667510, Stard13, LOC630708
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120G08.bB6Ng01-120G08.g
ACCDH924351DH924352
length254982
definitionDH924351|Mus musculus domesticus DNA, BAC clone: B6Ng01-120G08, 5' end.DH924352|Mus musculus domesticus DNA, BAC clone: B6Ng01-120G08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,923,644 - 150,923,897)(151,124,187 - 151,125,173)
sequence
aatgttctagggatgagaagcaagccttcttcacactgggaaatgcctca
ttgctgtggtggacatggtagcacacctgtttctcatttgatatttgact
gaagaacttgttgtttgactggacagcattaaaagtcatattgaaattgt
aacccagtaagttttgaagctgtccctaagaaaattaattctgttataat
ttacagccattgctacggattttcttttcccggtggtggtggtggtggtg
gtgg
gaattcaagaagcacattaaatacatcacttcccacttttagcttcttag
tgggtcccccaaattccaactggggcccacacaggctagacttcagaagc
taggcaactcaagttataacaatgtctgtggagtcatacccatcgacatg
tttaagccagcagaggcatggggctcatagaatagatactcagactgttg
aatgtgtcattcccccggctcaggaccatcctagtaagccttgggtatga
cagtagtgggtggagcaatgtgtgaggacacaggatgggggacccccagc
ctcctggatagcctgggagcctcttatcctcactaaaatatggttactat
ggagagggaaagaaatccagccacagcattgggaagatgtgtggtataga
gcattgagtatcatcctcttagtggcctgtgagcatggccgtcacagtct
ttcagaaatttcttagggctggagagatggatcagcggttaagagcactg
actgctcttccagaggccctgagttcaattcccagcaaccacatggtggc
tcacaaccatctgtaatgggatctgacaccctcttctggtgtatctgaag
acagctacaatgcactcttaaataaaacaaataaatactttttaaagaga
aatttctatgttaagatggacccgtgtcctcctggataatgtctaggagc
taaaaccaaatcccacatgctctctttgggatcatacacactcctacaga
tattaagattttttaacttcaacttcctatgttctatatatgttctatat
atgttctatatgtaaccagaaagttctattataaaaaaaaatagtgtgga
ggtgtatataaaggaataatgtttctttagaaaaacaaaaagcccactta
ctagaaaaacttatattttatatagatttacttcatttttttactttatt
atgagactggtcgctggtggatgtctgtgtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_150923644_150923897
seq2: B6Ng01-120G08.b_52_305

seq1  AATGTTCTAGGGATGAGAAGCAAGCCTTCTTCACACTGGGAAATGCCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCTAGGGATGAGAAGCAAGCCTTCTTCACACTGGGAAATGCCTCA  50

seq1  TTGCTGTGGTGGACATGGTAGCACACCTGTTTCTCATTTGATATTTGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTGGTGGACATGGTAGCACACCTGTTTCTCATTTGATATTTGACT  100

seq1  GAAGAACTTGTTGTTTGACTGGACAGCATTAAAAGTCATATTGAAATTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAACTTGTTGTTTGACTGGACAGCATTAAAAGTCATATTGAAATTGT  150

seq1  AACCCAGTAAGTTTTGAAGCTGTCCCTAAGAAAATTAATTCTGTTATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGTAAGTTTTGAAGCTGTCCCTAAGAAAATTAATTCTGTTATAAT  200

seq1  TTACAGCCATTGCTACGGATTTTCTTTTCCCGGTGGTGGTGGTGGTGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCCATTGCTACGGATTTTCTTTTCCCGGTGGTGGTGGTGGTGGTG  250

seq1  GTGG  254
      ||||
seq2  GTGG  254

seq1: chr5_151124187_151125173
seq2: B6Ng01-120G08.g_69_1050 (reverse)

seq1  GTACACAGACATACACACAGGCGAACAGTCACACTAATAAAGTAAAAAAA  50
      |||||||||||| ||| || |||| ||||| || ||||||||||||||||
seq2  GTACACAGACATCCAC-CA-GCGACCAGTCTCA-TAATAAAGTAAAAAAA  47

seq1  TG-AGTAAATCTATATTAAAATATTAAAGTTTTTCTAGTAATGTGGGCTT  99
      || |||||||||||| ||||||||  ||||||||||||||| ||||||||
seq2  TGAAGTAAATCTATA-TAAAATAT--AAGTTTTTCTAGTAA-GTGGGCTT  93

seq1  TTTGTTTTTCTTAAGAAACATTTATACTTTATAATACACCTCCACACTAT  149
      ||||||||||| ||||||||||  | |||||| |||||||||||||||||
seq2  TTTGTTTTTCTAAAGAAACATTATTCCTTTAT-ATACACCTCCACACTAT  142

seq1  TTTTTTTTATAATAGAACTTTCTGGTTACATATAGAACATATATAGAACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTATAATAGAACTTTCTGGTTACATATAGAACATATATAGAACA  192

seq1  TATATAGAACATAGGAAGTTGAAGTT-AAAAATCTTAATATCTGTAGGAG  248
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TATATAGAACATAGGAAGTTGAAGTTAAAAAATCTTAATATCTGTAGGAG  242

seq1  TGTGTATGATCCC-AAGAGAGCATGTGGGATTTGGTTTTAGCTCCTAGAC  297
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGATCCCAAAGAGAGCATGTGGGATTTGGTTTTAGCTCCTAGAC  292

seq1  ATTATCCAGGAGGACACGGGTCCATCTTAACATAGAAATTTCTCTTTAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCCAGGAGGACACGGGTCCATCTTAACATAGAAATTTCTCTTTAAA  342

seq1  AAGTATTTATTTGTTTTATTTAAGAGTGCATTGTAGCTGTCTTCAGATAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTTATTTGTTTTATTTAAGAGTGCATTGTAGCTGTCTTCAGATAC  392

seq1  ACCAGAAGAGGGTGTCAGATCCCATTACAGATGGTTGTGAGCCACCATGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAGAGGGTGTCAGATCCCATTACAGATGGTTGTGAGCCACCATGT  442

seq1  GGTTGCTGGGAATTGAACTCAGGGCCTCTGGAAGAGCAGTCAGTGCTCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCTGGGAATTGAACTCAGGGCCTCTGGAAGAGCAGTCAGTGCTCTT  492

seq1  AACCGCTGATCCATCTCTCCAGCCCTAAGAAATTTCTGAAAGACTGTGAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGCTGATCCATCTCTCCAGCCCTAAGAAATTTCTGAAAGACTGTGAC  542

seq1  GGCCATGCTCACAGGCCACTAAGAGGATGATACTCAATGCTCTATACCAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATGCTCACAGGCCACTAAGAGGATGATACTCAATGCTCTATACCAC  592

seq1  ACATCTTCCCAATGCTGTGGCTGGATTTCTTTCCCTCTCCATAGTAACCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTCCCAATGCTGTGGCTGGATTTCTTTCCCTCTCCATAGTAACCA  642

seq1  TATTTTAGTGAGGATAAGAGGCTCCCAGGCTATCCAGGAGGCTGGGGGTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGTGAGGATAAGAGGCTCCCAGGCTATCCAGGAGGCTGGGGGTC  692

seq1  CCCCATCCTGTGTCCTCACACATTGCTCCACCCACTACTGTCATACCCAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATCCTGTGTCCTCACACATTGCTCCACCCACTACTGTCATACCCAA  742

seq1  GGCTTACTAGGATGGTCCTGAGCCGGGGGAATGACACATTCAACAGTCTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTACTAGGATGGTCCTGAGCCGGGGGAATGACACATTCAACAGTCTG  792

seq1  AGTATCTATTCTATGAGCCCCATGCCTCTGCTGGCTTAAACATGTCGATG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTATTCTATGAGCCCCATGCCTCTGCTGGCTTAAACATGTCGATG  842

seq1  GGTATGACTCCACAGACATTGTTATAACTTGAGTTGCCTAGCTTCTGAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGACTCCACAGACATTGTTATAACTTGAGTTGCCTAGCTTCTGAAG  892

seq1  TCTAGCCTGTGTGGGCCCCAGTTGGAATTTGGGGGACCCACTAAGAAGCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCCTGTGTGGGCCCCAGTTGGAATTTGGGGGACCCACTAAGAAGCT  942

seq1  AAAAGTGGGAAGTGATGTATTTAATGTGCTTCTTGAATTC  987
      ||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGGGAAGTGATGTATTTAATGTGCTTCTTGAATTC  982