BAC Information

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BAC

Clone NameB6Ng01-120H05
Chromosome5 (Build37)
Map Location 43,177,691 - 43,178,836
singlet/doubletsinglet
Overlap genenone
Upstream geneA230054D04Rik, LOC384308, LOC100040588, EG636612
Downstream geneLOC433883, EG665934, Cpeb2, C1qtnf7, 4833430A08Rik, 5730509K17Rik, Fbxl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120H05.bB6Ng01-120H05.g
ACCDH924393DH924394
length1,1221,144
definitionDH924393|Mus musculus domesticus DNA, BAC clone: B6Ng01-120H05, 5' end.DH924394|Mus musculus domesticus DNA, BAC clone: B6Ng01-120H05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcttctcttaccttcaactgccttctttgctctagttctctc
catccaaaaattctatttttcaatcaatttacttattgattcgctttatg
ttctgatcacagatcccctctcctcccattcacccctgtatggcccctat
ttcacctccttttcaggtcctctttaggtttcatcccaccctggcacctc
aagccacagcagaagtaggcacatcctcttccactgaggtcagacaaggc
agcccagttaggggaacagggtccacaggcaagtaacagagtcagggtaa
gtccctgctccagttgttgggagacctgcatgaagaccaagctgaacatc
tgtacgggtagcctaggcttatcccttgagttctcattgattggtggttc
agtctttgggcgtttccagttgtccaggttagaaactctgttgatcttct
tgtggagtcctaatttctttaccatgtgtatttagaaatcctggacagaa
atgcacacaagtaatcaaatgaatgttctcattcttatagtttcacaaaa
tgtagcacactgtaagtcttaaagaactacccacattaatttatacacag
aaaatgtgatggaagggagaaaaagtgctgattacagagggtaaggagac
aagcatcttaaatagtgcatagaatcagagttgtgaacacaaaaactctt
tatagtttgtgtctgtgtaatggagtttatgctatttttttccctctttc
cttttccatatattctgaagtttctttaataagcacgtgtcacatctgtg
ataaagaatgttattagtaccaaagccacatgttacaatttaggtgctgc
ctgtatggttttctttttttttttttttaatgttgttgtttgcttaagga
acaagaaatttgacctccagctgtggtaagatggaaatgacaacctggga
ggcttcctatagggatttgcatcaaacagtatttagtagcaagtctattt
atgctattctttcctctgatgcctttgtactttggtacagtctgagtact
gtatgcacttagctatgaaccacagctttctattgtataaatgcatcatg
agcagcttctgccatggtgaca
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaactactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggagcatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgttccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gctcctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaattaatgaaattcctatgcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcagtgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgaaatga
aaggatggaccatgtagagactcctatacccagggacccaccccataatc
agcatccaaactttgacaccattgcatacactagcaagattttatcgaaa
gaacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacggtcagctaatggatggatcacagggctccca
attaagagctagagaagtaccagagctaaagggatctgcaccctatagtt
gacacatatgactacagtacccgagctctgactctagctgcatatatcaa
aagatggctatcgcatcctgaaagagaggcccattgaatgccacttatat
ggccagttcaggcaacgcaggcaaagggatggtggggtatggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_43177691_43178836
seq2: B6Ng01-120H05.b_46_1167 (reverse)

seq1  TGTCACATGTGGCAGAAGCCCTGCTCAATGATTGCATTTATAACAATTAG  50
      ||||||   |||||||||  |||||| |||| ||||||||| |||||   
seq2  TGTCAC-CATGGCAGAAG--CTGCTC-ATGA-TGCATTTAT-ACAAT--A  42

seq1  GAAAGCCTGTGGGTTTCATAGGCTAAGTTGCATTACAGTACCTTCAGGAA  100
      ||||| ||||||  |||||| |||||| |||| ||||||||  ||||  |
seq2  GAAAG-CTGTGG--TTCATA-GCTAAG-TGCA-TACAGTAC--TCAG--A  82

seq1  CTGTACCAAAGTACAAAGGCAACCAGAGGGAAAGGAATTGGCAT-AATAG  149
      |||||||||||||||||||| | |||| ||||||  | | |||| |||||
seq2  CTGTACCAAAGTACAAAGGC-ATCAGA-GGAAAG--AATAGCATAAATAG  128

seq1  ACTTGCTAACTAAATACTGTTTTGATGCAAAATCCCTATAGGAAGCCTCC  199
      ||||||| ||||||||||| |||||||| |||||||||||||||||||||
seq2  ACTTGCT-ACTAAATACTG-TTTGATGC-AAATCCCTATAGGAAGCCTCC  175

seq1  CAGGTTGTCATTTTCCATCTTTACCACAGCTGGAGGTC-AATTTCTTGTT  248
      |||||||||| |||||||| |||||||||||||||||| |||||||||||
seq2  CAGGTTGTCA-TTTCCATC-TTACCACAGCTGGAGGTCAAATTTCTTGTT  223

seq1  CCTTAAGCAAACAACAACATT-AAAAAAAAAAAAAAGAAAACCATACAGG  297
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCTTAAGCAAACAACAACATTAAAAAAAAAAAAAAAGAAAACCATACAGG  273

seq1  CAGCACCTAAATTGTAACATGTGGCTTTGGTACTAATAACATTCTTTATC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACCTAAATTGTAACATGTGGCTTTGGTACTAATAACATTCTTTATC  323

seq1  ACAGATGTGACACGTGCTTATTAAAGAAACTTCAGAATATATGGAAAAGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGTGACACGTGCTTATTAAAGAAACTTCAGAATATATGGAAAAGG  373

seq1  AAAGAGGGAAAAAAATAGCATAAACTCCATTACACAGACACAAACTATAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGGAAAAAAATAGCATAAACTCCATTACACAGACACAAACTATAA  423

seq1  AGAGTTTTTGTGTTCACAACTCTGATTCTATGCACTATTTAAGATGCTTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTTTGTGTTCACAACTCTGATTCTATGCACTATTTAAGATGCTTG  473

seq1  TCTCCTTACCCTCTGTAATCAGCACTTTTTCTCCCTTCCATCACATTTTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTACCCTCTGTAATCAGCACTTTTTCTCCCTTCCATCACATTTTC  523

seq1  TGTGTATAAATTAATGTGGGTAGTTCTTTAAGACTTACAGTGTGCTACAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATAAATTAATGTGGGTAGTTCTTTAAGACTTACAGTGTGCTACAT  573

seq1  TTTGTGAAACTATAAGAATGAGAACATTCATTTGATTACTTGTGTGCATT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGAAACTATAAGAATGAGAACATTCATTTGATTACTTGTGTGCATT  623

seq1  TCTGTCCAGGATTTCTAAATACACATGGTAAAGAAATTAGGACTCCACAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCAGGATTTCTAAATACACATGGTAAAGAAATTAGGACTCCACAA  673

seq1  GAAGATCAACAGAGTTTCTAACCTGGACAACTGGAAACGCCCAAAGACTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATCAACAGAGTTTCTAACCTGGACAACTGGAAACGCCCAAAGACTG  723

seq1  AACCACCAATCAATGAGAACTCAAGGGATAAGCCTAGGCTACCCGTACAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCAATCAATGAGAACTCAAGGGATAAGCCTAGGCTACCCGTACAG  773

seq1  ATGTTCAGCTTGGTCTTCATGCAGGTCTCCCAACAACTGGAGCAGGGACT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAGCTTGGTCTTCATGCAGGTCTCCCAACAACTGGAGCAGGGACT  823

seq1  TACCCTGACTCTGTTACTTGCCTGTGGACCCTGTTCCCCTAACTGGGCTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTGACTCTGTTACTTGCCTGTGGACCCTGTTCCCCTAACTGGGCTG  873

seq1  CCTTGTCTGACCTCAGTGGAAGAGGATGTGCCTACTTCTGCTGTGGCTTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTCTGACCTCAGTGGAAGAGGATGTGCCTACTTCTGCTGTGGCTTG  923

seq1  AGGTGCCAGGGTGGGATGAAACCTAAAGAGGACCTGAAAAGGAGGTGAAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCCAGGGTGGGATGAAACCTAAAGAGGACCTGAAAAGGAGGTGAAA  973

seq1  TAGGGGCCATACAGGGGTGAATGGGAGGAGAGGGGATCTGTGATCAGAAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGCCATACAGGGGTGAATGGGAGGAGAGGGGATCTGTGATCAGAAC  1023

seq1  ATAAAGCGAATCAATAAGTAAATTGATTGAAAAATAGAATTTTTGGATGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGCGAATCAATAAGTAAATTGATTGAAAAATAGAATTTTTGGATGG  1073

seq1  AGAGAACTAGAGCAAAGAAGGCAGTTGAAGGTAAGAGAAGAAAGAATTC  1146
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACTAGAGCAAAGAAGGCAGTTGAAGGTAAGAGAAGAAAGAATTC  1122