BAC Information

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BAC

Clone NameB6Ng01-121A21
Chromosome5 (Build37)
Map Location 14,831,841 - 14,832,977
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668085, LOC384149, LOC384148, Sema3e, LOC100042957, Pclo
Downstream geneENSMUSG00000033219, LOC624245, Speer8-ps1, Speer4c, Speer4d, 4930572O03Rik, Speer7-ps1, 4930519H02Rik, LOC100041781, Cacna2d1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121A21.bB6Ng01-121A21.g
ACCDH924837DH924838
length1,1331,168
definitionDH924837|Mus musculus domesticus DNA, BAC clone: B6Ng01-121A21, 5' end.DH924838|Mus musculus domesticus DNA, BAC clone: B6Ng01-121A21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagaccaaggggcaggaaagatggcttacaatttaagagtttaa
agttcctattgagtttgtgatcaggctggcctactgtatattgaatctca
aaacaaccaaacaaacacatatttatatttgctcatgtaaaaacaatttt
taagatgtgaaatatgcaaacattgtgtagaaatttatatatatatatac
atatatatatatatatatatatatatatatcttgcagtttatggctagtt
ttactaaaaaatagaggtgaggactcactcttaatctatacactcttagt
atcacattttaagccagaagatgtgccagtggtacctcattttgccaaac
aaccagaaggctctggatttgaacctcactgtcactgaaaagaaaagtca
catattgtccctatagtatgaagggtctactacttaagaatttagtcttt
ccctctctttcctattccaagtgtcacccaagtttaggttttcaggtctc
acccaaatcattactagtctgctgattgttcattttgtttccatctgagg
tatttgaagggtagtactatgaaaacccagtcaattgccatctcttcact
tgagaggtagaagcaggaggatcataagtttaacgtcacatttccttaaa
tcgtgattctgaggtcaaactaggctacttgagaccagttttaaaaatat
tctattatatcaccgcttctcttttcaaaaatactgcttatttattggtg
ttttgatgatttaaaaataacagatccaaggatggagagatggctcagtg
gttaagagcactggttgctcttctagagatcatgtgttcaattcccagca
accacatggtagctcacaaccatctgtgacatgatttgatgccctcttct
gatatgtgagtggcagcacacataaagtaagtaaataaatctttaaaaaa
aaaaaaacaatagcatatccttggtgctgctcaagtgttttcttgacttg
aaaatacctgatagaagataaatatgaaaaaagaaagccatgtttggact
cctggtgtcagaagtttcagtccactgtggctaagccgatgttttaggtg
cagtaaaacatctgaatttgttgaagaactcat

gaattctcacctgaggaataccgaatggcagagaagcacctcaaaaaatg
tccaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagag
tccacctcacaccactcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaagaatacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatgtatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctcctttgaagtgggaa
aaaaacacccatgggaaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagattttttcgaa
aggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaa
cacagaactggatgctcacagtcagctaatggatgatcacagggctccaa
tgaggagttagagaagtacccaaggactaaaggatctgcaaccctataag
gtggatcacatttgactaccagtacccaggagcctcttgactctactgca
aagttcaaagatgcctagtcggcctatcacttgtagaagtccattgatca
ctaacttggatgctcgtacaggtactgccagcctcaagtagatgtgcgtt
aaggggtaattgtatgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_14831841_14832977
seq2: B6Ng01-121A21.b_49_1181

seq1  GAATTCAAGACCAAGGGGCAGGAAAGATGGCTTACAATTTAAGAGTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGACCAAGGGGCAGGAAAGATGGCTTACAATTTAAGAGTTTAA  50

seq1  AGTTCCTATTGAGTTTGTGATCAGGCTGGCCTACTGTATATTGAATCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTATTGAGTTTGTGATCAGGCTGGCCTACTGTATATTGAATCTCA  100

seq1  AAACAACCAAACAAACACATATTTATATTTGCTCATGTAAAAACAATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACCAAACAAACACATATTTATATTTGCTCATGTAAAAACAATTTT  150

seq1  TAAGATGTGAAATATGCAAACATTGTGTAGAAATTTATATATATATATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGTGAAATATGCAAACATTGTGTAGAAATTTATATATATATATAC  200

seq1  ATATATATATATATATATATATATATATATCTTGCAGTTTATGGCTAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATCTTGCAGTTTATGGCTAGTT  250

seq1  TTACTAAAAAATAGAGGTGAGGACTCACTCTTAATCTATACACTCTTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAAAAAATAGAGGTGAGGACTCACTCTTAATCTATACACTCTTAGT  300

seq1  ATCACATTTTAAGCCAGAAGATGTGCCAGTGGTACCTCATTTTGCCAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATTTTAAGCCAGAAGATGTGCCAGTGGTACCTCATTTTGCCAAAC  350

seq1  AACCAGAAGGCTCTGGATTTGAACCTCACTGTCACTGAAAAGAAAAGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGAAGGCTCTGGATTTGAACCTCACTGTCACTGAAAAGAAAAGTCA  400

seq1  CATATTGTCCCTATAGTATGAAGGGTCTACTACTTAAGAATTTAGTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTGTCCCTATAGTATGAAGGGTCTACTACTTAAGAATTTAGTCTTT  450

seq1  CCCTCTCTTTCCTATTCCAAGTGTCACCCAAGTTTAGGTTTTCAGGTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCTTTCCTATTCCAAGTGTCACCCAAGTTTAGGTTTTCAGGTCTC  500

seq1  ACCCAAATCATTACTAGTCTGCTGATTGTTCATTTTGTTTCCATCTGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAATCATTACTAGTCTGCTGATTGTTCATTTTGTTTCCATCTGAGG  550

seq1  TATTTGAAGGGTAGTACTATGAAAACCCAGTCAATTGCCATCTCTTCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAAGGGTAGTACTATGAAAACCCAGTCAATTGCCATCTCTTCACT  600

seq1  TGAGAGGTAGAAGCAGGAGGATCATAAGTTTAACGTCACATTTCCTTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGTAGAAGCAGGAGGATCATAAGTTTAACGTCACATTTCCTTAAA  650

seq1  TCGTGATTCTGAGGTCAAACTAGGCTACTTGAGACCAGTTTTAAAAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGATTCTGAGGTCAAACTAGGCTACTTGAGACCAGTTTTAAAAATAT  700

seq1  TCTATTATATCACCGCTTCTCTTTTCAAAAATACTGCTTATTTATTGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTATATCACCGCTTCTCTTTTCAAAAATACTGCTTATTTATTGGTG  750

seq1  TTTTGATGATTTAAAAATAACAGATCCAAGGATGGAGAGATGGCTCAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATGATTTAAAAATAACAGATCCAAGGATGGAGAGATGGCTCAGTG  800

seq1  GTTAAGAGCACTGGTTGCTCTTCTAGAGATCATGTGTTCAATTCCCAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGAGCACTGGTTGCTCTTCTAGAGATCATGTGTTCAATTCCCAGCA  850

seq1  ACCACATGGTAGCTCACAACCATCTGTGACATGATTTGATGCCCTCTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATGGTAGCTCACAACCATCTGTGACATGATTTGATGCCCTCTTCT  900

seq1  GATATGTGAGTGGCAGCACACATAAAGTAAGTAAATAAATCTTTAAAAAA  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GATATGTGAGTGGCAGCACACATAAAGTAAGTAAATAAATCTTT-AAAAA  949

seq1  AAAAAAAACAATAGCATATCCTTGGTGCTGCTCAAGTGTTTTCTTGACTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACAATAGCATATCCTTGGTGCTGCTCAAGTGTTTTCTTGACTT  999

seq1  GAAAATACCTGATAG-AGAT-AATATGAAAATAAGAAAGCCATGTTTGGA  1048
      ||||||||||||||| |||| |||||||||| ||||||||||||||||||
seq2  GAAAATACCTGATAGAAGATAAATATGAAAA-AAGAAAGCCATGTTTGGA  1048

seq1  CTCCTGGTGTCAGAAGTTTCAGTCCACTGTGAGCTAAAGCCGATGTTTTT  1098
      ||||||||||||||||||||||||||||||| ||| ||||||||| ||||
seq2  CTCCTGGTGTCAGAAGTTTCAGTCCACTGTG-GCT-AAGCCGATG-TTTT  1095

seq1  GGGTGCAGTAAAACATCTGAATTTGTTTGAGGAACTCAT  1137
       |||||||||||||||||||||||| |||| ||||||||
seq2  AGGTGCAGTAAAACATCTGAATTTG-TTGAAGAACTCAT  1133


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