BAC Information

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BAC

Clone NameB6Ng01-122E19
Chromosome5 (Build37)
Map Location 99,412,794 - 99,413,438
singlet/doubletsinglet
Overlap genePrkg2
Upstream geneAntxr2, EG435856, LOC666315, LOC666320, LOC666326, Prdm8, Fgf5, 1700007G11Rik, Bmp3
Downstream geneLOC100041680, Rasgef1b, A930011G23Rik, LOC100040738, LOC666364, LOC100040763, LOC100040774, Hnrpd, 4930524J08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122E19.g
ACCDH925761
length656
definitionDH925761|Mus musculus domesticus DNA, BAC clone: B6Ng01-122E19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttaatacagggaaaatgcccgtggctttttggtcgtctaaggga
ccctttgcgacgtaaccgcagggctgtcaccgcactgtttgctcttctct
ttttggttgcagtggccaccctggcctgactggctgcattccccagttga
caaatactgggcagtccagcatcgtggccagttcttaccaccatatattt
ttggtctgacctatttccacaggctttcctggtccacgagttgctgtcga
cacactgggaggtactatttgccttccttcctcagtttgaggtgacaaag
aaccatccctgggctgattccacaggggaagttaccctttaagaaataat
aaggctctttctcaatgtcccttctcaagctcgtaccctctgaacttgct
ggttgtcaggaattaagaccacacctctgtgcatgtaagaggatttgtag
tagtccaagaacagcctggtagcccatcagaagcttctcatgtcatttct
attccatgtctgggtcagggaccaagattggaatgggggtaagggacatc
ccagccatggtccacctggcaggacactgccacctcaccgaagtgattga
tattttaattagttacaggaggagggcacctttggattgcaggatgtggt
catttc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_99412794_99413438
seq2: B6Ng01-122E19.g_73_716 (reverse)

seq1  GGAATGACCACATCCCTGCAATCC-AAGGTGCCCTCCTCCTGTAACTAAT  49
      | ||||||||||| |||||||||| |||||||||||||||||||||||||
seq2  GAAATGACCACAT-CCTGCAATCCAAAGGTGCCCTCCTCCTGTAACTAAT  49

seq1  TAAAATATCAATCACTTCGGTGAAGTGGCAGTGTCCTGCCAGGTGGACCA  99
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TAAAATATCAATCACTTCGGTGAGGTGGCAGTGTCCTGCCAGGTGGACCA  99

seq1  TGGCTGGGGATGTCCCTTACCCCCATTCCAATCTTGGTCCCTGACCCAGA  149
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCT-GGGATGTCCCTTACCCCCATTCCAATCTTGGTCCCTGACCCAGA  148

seq1  CATGGAATAGAAATGACATGAGAAGCTTCTGATGGGCTACCAGGCTGTTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAATAGAAATGACATGAGAAGCTTCTGATGGGCTACCAGGCTGTTC  198

seq1  TTGGACTACTACAAATCCTCTTACATGCACAGAGGTGTGGTCTTAATTCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACTACTACAAATCCTCTTACATGCACAGAGGTGTGGTCTTAATTCC  248

seq1  TGACAACCAGCAAGTTCAGAGGGTACGAGCTTGAGAAGGGACATTGAGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAACCAGCAAGTTCAGAGGGTACGAGCTTGAGAAGGGACATTGAGAA  298

seq1  AGAGCCTTATTATTTCTTAAAGGGTAACTTCCCCTGTGGAATCAGCCCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTTATTATTTCTTAAAGGGTAACTTCCCCTGTGGAATCAGCCCAG  348

seq1  GGATGGTTCTTTGTCACCTCAAACTGAGGAAGGAAGGCAAATAGTACCTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTTCTTTGTCACCTCAAACTGAGGAAGGAAGGCAAATAGTACCTC  398

seq1  CCAGTGTGTCGACAGCAACTCGTGGACCAGGAAAGCCTGTGGAAATAGGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGTGTCGACAGCAACTCGTGGACCAGGAAAGCCTGTGGAAATAGGT  448

seq1  CAGACCAAAAATATATGGTGGTAAGAACTGGCCACGATGCTGGACTGCCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCAAAAATATATGGTGGTAAGAACTGGCCACGATGCTGGACTGCCC  498

seq1  AGTATTTGTCAACTGGGGAATGCAGCCAGTCAGGCCAGGGTGGCCACTGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTGTCAACTGGGGAATGCAGCCAGTCAGGCCAGGGTGGCCACTGC  548

seq1  AACCAAAAAGAGAAGAGCAAACAGTGCGGTGACAGCCCTGCGGTTACGTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAAAGAGAAGAGCAAACAGTGCGGTGACAGCCCTGCGGTTACGTC  598

seq1  GCAAAGGGTCCCTTAGACGACCAAAAAGCCACGGGCATTTTCCCTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGGGTCCCTTAGACGACCAAAAAGCCACGGGCATTTTCCCTG  644