BAC Information

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BAC

Clone NameB6Ng01-122H22
Chromosome5 (Build37)
Map Location 61,193,989 - 61,194,698
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546866, Cbfa2t2-ps1, LOC100041498
Downstream geneLOC666597, EG666610, LOC100041524
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122H22.bB6Ng01-122H22.g
ACCDH925903DH925904
length1,242710
definitionDH925903|Mus musculus domesticus DNA, BAC clone: B6Ng01-122H22, 5' end.DH925904|Mus musculus domesticus DNA, BAC clone: B6Ng01-122H22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcctctcaaaaggaaatgcagaggcaaagaggagaggagaggc
tgaagggaaggtgatccagagattgtcccacctaatgatccatcccacct
gcaggtaccaaacccatacactattgctgatgtcaaaaagtgcttattga
caaggacctggtatagctgtctcctgagaggttttgccagagcctgatca
atacagacgcagatgcatacagccaaccctcagactgagcacagagaccc
aaatggagaatttaggtcaagtactgtaggagctaaaggggtttgcaatc
ccacaggaagagcaacaatatcagctaagcagaccccccaaaactctcaa
ggactaaaccaccaaccaaagagtacaaatgggggattgggggattcatg
gctggatatgtagcaggggattgtcttattcatatatattatacaatatt
cttgtttccttattcatatatatatatatatatatatatatatatatata
tatatatgcatatcactgttgtaggaggccatttttttctttctcttttt
tttgttaaactttagtttttttcagctccatccctccacttgatgccctg
tctttctgctagaggtaaattctacaagttccctctccccactgttaggt
atttcatctaagttccctctctttgagtatgaaatatttactcccaggtc
tccagtacattctatagggacccgccaccattcacttcacaaagttgtat
atttccattctttctactagtcctcagggattcattcctggtccaccccc
cccacactgatacatgatcttgttcccctttaccctgcctctcctctttc
cctctcccacccagttccttccctccctctgccccccgctttcatcttcc
actcaagtagaattgaagcatctcattgggtcctttttcttgttaacctt
cttgaatctgtggattgtgtcctgaataattctgtaatttttgtctaata
tccaccttaatatggagtacataccgtgagtgtcctttgggatctgagat
tatcccatcaggatgatctttctaagttcatccattgccctgccaaacaa
atggatgtccttggttggtaaagactgaaattggtatccatggtaaataa
atacccatttttaaatccattccgaggagccatctgggtggttcacgact
tcaggctattcactatagaagatgagagcctccatcggaaga
gaattccaagagcttctagaatgatgtctcagtggagtaaagtgtgttct
gtataaggacttgagactggatccccagaattctgagaaatgctgattgg
gtgtgatcattctcctgtatttccatgattttgagcatgaagacagagag
agacaattccaggatcaaactcaaatttatctagtctagttagtcaaatt
gatgattttttgtttgtttgtttgtttgtttttgtttttgtttttttgag
acagggtttctctgtatagccttggctgtcctgtaactcactttgtaagt
aggctggcctcaaactcagaaatctgcctgcctctgcctcccgagtgctg
ggattaaaggcgttctccaccacgcccggctcaaattgatgatctttgag
ttcaagtaaaaaaccatgtctcaatctataaagtgaattctggttaaata
aatcacttaaaatctacatctagtttctacacataaatgcatatacaaga
tatatgcatatatagacatgcaaaagactaagggggggaaaggagggaga
ggccgggggcatggtgagagagagagagagagagagagagagagagagaa
agcctgttaacttaatgtgactcaagtaagagctttcttctatccaatat
attttcactccaatgttttgagatgggaagaaacatgatatattgacaac
aatgtgtaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_61193989_61194698
seq2: B6Ng01-122H22.g_65_774

seq1  GAATTCCAAGAGCTTCTAGAATGATGTCTCAGTGGAGTAAAGTGTGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGAGCTTCTAGAATGATGTCTCAGTGGAGTAAAGTGTGTTCT  50

seq1  GTATAAGGACTTGAGACTGGATCCCCAGAATTCTGAGAAATGCTGATTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAGGACTTGAGACTGGATCCCCAGAATTCTGAGAAATGCTGATTGG  100

seq1  GTGTGATCATTCTCCTGTATTTCCATGATTTTGAGCATGAAGACAGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGATCATTCTCCTGTATTTCCATGATTTTGAGCATGAAGACAGAGAG  150

seq1  AGACAATTCCAGGATCAAACTCAAATTTATCTAGTCTAGTTAGTCAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATTCCAGGATCAAACTCAAATTTATCTAGTCTAGTTAGTCAAATT  200

seq1  GATGATTTTTTGTTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTTTTTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTTTTTGTTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTTTTTGAG  250

seq1  ACAGGGTTTCTCTGTATAGCCTTGGCTGTCCTGTAACTCACTTTGTAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTTTCTCTGTATAGCCTTGGCTGTCCTGTAACTCACTTTGTAAGT  300

seq1  AGGCTGGCCTCAAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGCCTCAAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTG  350

seq1  GGATTAAAGGCGTTCTCCACCACGCCCGGCTCAAATTGATGATCTTTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAAAGGCGTTCTCCACCACGCCCGGCTCAAATTGATGATCTTTGAG  400

seq1  TTCAAGTAAAAAACCATGTCTCAATCTATAAAGTGAATTCTGGTTAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTAAAAAACCATGTCTCAATCTATAAAGTGAATTCTGGTTAAATA  450

seq1  AATCACTTAAAATCTACATCTAGTTTCTACACATAAATGCATATACAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTTAAAATCTACATCTAGTTTCTACACATAAATGCATATACAAGA  500

seq1  TATATGCATATATAGACATGCAAAAGACTAAGGGGGGGAAAGGAGGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGCATATATAGACATGCAAAAGACTAAGGGGGGGAAAGGAGGGAGA  550

seq1  GGCCGGGGGCATGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGGGGGCATGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAA  600

seq1  AGCCAGTTAACTTAATGTGACTCAAGAAAGAGC-TTCTTCTATCCAATAT  649
      |||| ||||||||||||||||||||| |||||| ||||||||||||||||
seq2  AGCCTGTTAACTTAATGTGACTCAAGTAAGAGCTTTCTTCTATCCAATAT  650

seq1  A-TTTCACTCCAATGTTTTGAGATGGGATGAGACATGATATTATTGACAA  698
      | |||||||||||||||||||||||||| || |||||||| |||||||||
seq2  ATTTTCACTCCAATGTTTTGAGATGGGAAGAAACATGATA-TATTGACAA  699

seq1  CACATGTGTAGA  710
      || |||||||||
seq2  CA-ATGTGTAGA  710