BAC Information

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BAC

Clone NameB6Ng01-125C21
Chromosome5 (Build37)
Map Location 132,753,758 - 132,879,573
singlet/doubletdoublet
Overlap geneAuts2
Upstream geneWbscr17, 4930563F08Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125C21.bB6Ng01-125C21.g
ACCDH927889DH927890
length624744
definitionDH927889|Mus musculus domesticus DNA, BAC clone: B6Ng01-125C21, 5' end.DH927890|Mus musculus domesticus DNA, BAC clone: B6Ng01-125C21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,878,950 - 132,879,573)(132,753,758 - 132,754,492)
sequence
gaattcattttgcctcttgagtgccattctcatttgttttaaaaaccacc
ctggcattgcaggcaggaaaggaggaggccgtggagctgcaggaggaaag
ggggctccatgtgactctgtgaatccggctgcaggggctggtggaaccga
cagcctgagaaatatctagaatgtagatcccagggatagaggcattcaca
aggaatcctgggaataccccgtaccgtttcattagattggaacaatcttt
gagcactctttgttacatttaaccctgaccccatcccctattttgatgtt
gataagactcaaatttaagcctgggtgatataactagagatggaactcat
tcttgtggagattattagcttgaggagggacaaagcagtaacccaagtga
gaaggccagtaggacactaacaagccatccttccagcatcgtgatttcat
tagataccacaggaagaaaggtgggtttttaatctcaaactttacagacc
agagacaacagggttttaaagaattctagtacttatttgccagaggtcac
acagttcatgggagactagggaagttgtcgtggggggagagagaaagaga
aagagagggagagggagaggaaga
gaattctggtttgacctgctgagagtagcatgaaccacaacaatcaaaac
ctttctccaacatgcaacactcaaggaacccaaaaggcaagtcactaatt
gtctcagccatactcaaaatacacgttctgtatcctagtcaaaaacctca
ggagacagaaaagggtactctgtgaggctggagaatgtgttctgtgtggc
aagagagggtgggtgctctgtgagatgagaaaatggtgctctataatgta
gtagagggtactctgtgggggtagacaggaagttcttttggttaaaaagt
attacaatgtggggtggagaagggtgctctgtgaagtggaagagagtgct
ctctgaggtaaaagagggtactcttaggtaaaccagggtactctctgagg
taaaggagagtactgtgtgaggaacaagagaggaagctctctgaagtgag
agagcatgctctgtgtgtgtgtgtgagaaagattgctctatgacaggggg
tggatactctgtgagaagaaaggatgccctgtggtgaagataaggtatcc
cttcatttctctgaggaggagaggtgctctgtgggatgagagaggggtgt
tttcatgaggctgacaggatgctgtgagaggggaggatgtgctttgttgg
aaggagaaagctgctctgtgagagggaagagacagcactgaaaaattgaa
gagagagaggatgcttctgaaatttgtaaaggagactgtgtgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_132878950_132879573
seq2: B6Ng01-125C21.b_45_668 (reverse)

seq1  TCTTCCTCTCCCTCTCCCTCTCTTTCTCTTTCTCTCTCCCCCCACGACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCTCCCTCTCCCTCTCTTTCTCTTTCTCTCTCCCCCCACGACAA  50

seq1  CTTCCCTAGTCTCCCATGAACTGTGTGACCTCTGGCAAATAAGTACTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTAGTCTCCCATGAACTGTGTGACCTCTGGCAAATAAGTACTAGA  100

seq1  ATTCTTTAAAACCCTGTTGTCTCTGGTCTGTAAAGTTTGAGATTAAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTAAAACCCTGTTGTCTCTGGTCTGTAAAGTTTGAGATTAAAAAC  150

seq1  CCACCTTTCTTCCTGTGGTATCTAATGAAATCACGATGCTGGAAGGATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTTTCTTCCTGTGGTATCTAATGAAATCACGATGCTGGAAGGATGG  200

seq1  CTTGTTAGTGTCCTACTGGCCTTCTCACTTGGGTTACTGCTTTGTCCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTAGTGTCCTACTGGCCTTCTCACTTGGGTTACTGCTTTGTCCCTC  250

seq1  CTCAAGCTAATAATCTCCACAAGAATGAGTTCCATCTCTAGTTATATCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGCTAATAATCTCCACAAGAATGAGTTCCATCTCTAGTTATATCAC  300

seq1  CCAGGCTTAAATTTGAGTCTTATCAACATCAAAATAGGGGATGGGGTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTTAAATTTGAGTCTTATCAACATCAAAATAGGGGATGGGGTCAG  350

seq1  GGTTAAATGTAACAAAGAGTGCTCAAAGATTGTTCCAATCTAATGAAACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAATGTAACAAAGAGTGCTCAAAGATTGTTCCAATCTAATGAAACG  400

seq1  GTACGGGGTATTCCCAGGATTCCTTGTGAATGCCTCTATCCCTGGGATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACGGGGTATTCCCAGGATTCCTTGTGAATGCCTCTATCCCTGGGATCT  450

seq1  ACATTCTAGATATTTCTCAGGCTGTCGGTTCCACCAGCCCCTGCAGCCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTAGATATTTCTCAGGCTGTCGGTTCCACCAGCCCCTGCAGCCGG  500

seq1  ATTCACAGAGTCACATGGAGCCCCCTTTCCTCCTGCAGCTCCACGGCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACAGAGTCACATGGAGCCCCCTTTCCTCCTGCAGCTCCACGGCCTC  550

seq1  CTCCTTTCCTGCCTGCAATGCCAGGGTGGTTTTTAAAACAAATGAGAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTCCTGCCTGCAATGCCAGGGTGGTTTTTAAAACAAATGAGAATG  600

seq1  GCACTCAAGAGGCAAAATGAATTC  624
      ||||||||||||||||||||||||
seq2  GCACTCAAGAGGCAAAATGAATTC  624

seq1: chr5_132753758_132754492
seq2: B6Ng01-125C21.g_68_811

seq1  GAATTCTGGTTTGACCTGCTGAGAGTAGCATGAACCACAACAATCAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTTTGACCTGCTGAGAGTAGCATGAACCACAACAATCAAAAC  50

seq1  CTTTCTCCAACATGCAACACTCAAGGAACCCAAAAGGCAAGTCACTAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCCAACATGCAACACTCAAGGAACCCAAAAGGCAAGTCACTAATT  100

seq1  GTCTCAGCCATACTCAAAATACACGTTCTGTATCCTAGTCAAAAACCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGCCATACTCAAAATACACGTTCTGTATCCTAGTCAAAAACCTCA  150

seq1  GGAGACAGAAAAGGGTACTCTGTGAGGCTGGAGAATGTGTTCTGTGTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACAGAAAAGGGTACTCTGTGAGGCTGGAGAATGTGTTCTGTGTGGC  200

seq1  AAGAGAGGGTGGGTGCTCTGTGAGATGAGAAAATGGTGCTCTATAATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGGGTGGGTGCTCTGTGAGATGAGAAAATGGTGCTCTATAATGTA  250

seq1  GTAGAGGGTACTCTGTGGGGGTAGACAGGAAGTTCTTTTGGTTAAAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGGGTACTCTGTGGGGGTAGACAGGAAGTTCTTTTGGTTAAAAAGT  300

seq1  ATTACAATGTGGGGTGGAGAAGGGTGCTCTGTGAAGTGGAAGAGAGTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAATGTGGGGTGGAGAAGGGTGCTCTGTGAAGTGGAAGAGAGTGCT  350

seq1  CTCTGAGGTAAAAGAGGGTACTCTTAGGTAAACCAGGGTACTCTCTGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGGTAAAAGAGGGTACTCTTAGGTAAACCAGGGTACTCTCTGAGG  400

seq1  TAAAGGAGAGTACTGTGTGAGGAACAAGAGAGGAAGCTCTCTGAAGTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAGAGTACTGTGTGAGGAACAAGAGAGGAAGCTCTCTGAAGTGAG  450

seq1  AGAGCATGCTCTGTGTGTGTGTGTGAGAAAGATTGCTCTATGACAGGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATGCTCTGTGTGTGTGTGTGAGAAAGATTGCTCTATGACAGGGGG  500

seq1  TGGATACTCTGTGAGAAGAAAGGATGCCCTGTGGTGAAGATAAGGTATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATACTCTGTGAGAAGAAAGGATGCCCTGTGGTGAAGATAAGGTATCC  550

seq1  CTTCA-TTCTCTGAGGAGGAGAGGTGCTCTGTGGGATGAGAGA-GGGTG-  597
      ||||| ||||||||||||||||||||||||||||||||||||| ||||| 
seq2  CTTCATTTCTCTGAGGAGGAGAGGTGCTCTGTGGGATGAGAGAGGGGTGT  600

seq1  TTTCATGAGGCTGACAGGATGCTGTGAGA-GGGAGGATGTGCTTTGTTGG  646
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTTCATGAGGCTGACAGGATGCTGTGAGAGGGGAGGATGTGCTTTGTTGG  650

seq1  AAGGAG-AAGCTGCTCTGTGAGA-GGAAGAGACAGCACTG-AGAACTGAA  693
      |||||| |||||||||||||||| |||||||||||||||| | || ||||
seq2  AAGGAGAAAGCTGCTCTGTGAGAGGGAAGAGACAGCACTGAAAAATTGAA  700

seq1  GAGAGAGAGGATGC-TCTG-AAGTAGTAAAGGAGACTGTGTGAG  735
      |||||||||||||| |||| || | |||||||||||||||||||
seq2  GAGAGAGAGGATGCTTCTGAAATTTGTAAAGGAGACTGTGTGAG  744