BAC Information

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BAC

Clone NameB6Ng01-126D24
Chromosome5 (Build37)
Map Location 17,631,781 - 17,632,620
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC626390, LOC668142, LOC100041749, LOC100041832, Speer4f, EG630927, Sema3c, Cd36, Gnat3
Downstream geneGnai1, LOC100041818, LOC668167
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126D24.bB6Ng01-126D24.g
ACCDH928671DH928672
length8401,153
definitionDH928671|Mus musculus domesticus DNA, BAC clone: B6Ng01-126D24, 5' end.DH928672|Mus musculus domesticus DNA, BAC clone: B6Ng01-126D24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaactgttttgggtaatttctgcttagatctatgtaatgatttgt
cactttaaaatatgaattctatggagcaattatattttctcatttgagtg
aaggacatgaggcaaatatttgctgagggaagaacattagtatacttagc
tatgcagaacacaatggctaacctgacatttattcgcatatacatcaagt
ttattgtctgtctgttaatcatattcttccctagaactagctgttttctt
attattaaattttcttatgctttcttaataagcaagaaaataatattagt
gtcggatcttggctaactttttaataatcatctacttactgtgatttgca
cttctggggaaatataaaaaataacttcttatgtttatccttagaagtct
gataactgacctatgatcaatcatctctatatatagatcatgtagaactt
tgtttttccagacactattgcatatgccagcaagattttgctgaaaggac
cctgatataggtgtcttgtatgaggctatgccagtgtctgacaaacacag
aagtggatgctcacagttatctataggatggaacacagggccctcaatac
aagagctagagaaagtacccaaggagctaaagggttctgcaaccctatag
gtggaaaaacaatatgaactaaccagtacccccagagctagtgtctctag
ctgcatatgtagcagaagatagcctagtcggccatcattgggaagagagg
ccccttggtcttgcaaactttatatgacacagtacagtggaaacaccagg
gccaagaagtgggagtaggtgggtagaggagctggggttg
gaattctcacctgaggaataccaaatgactgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccaattcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaagaacactcctccattgttggtg
agattgctagcttgtacaaccactctggaaatcagtctggcggtttctca
gaaaattggagatagtactactagaggatcccacaatacctctcctgggc
atatatccagtagatgtcccaaccggtaaaaaggacacatgctccactat
gttcatagcagccttatttataataaccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcttgagtgaggtaacacaatcacaaa
agaactcaaatgatatgtactcactgataaatggatattagcccagaaac
ttagtatacccgagatataagatacaatttgcaaaacacatgaaactgaa
gaagaacgaagaccaaagtgtgaacactatgccccttcttagaattggaa
acaatcacccatggaagagttacagagacaaagtttggagctgagacaaa
ggatggaccatctagagactgccataatccagggatccattccataatta
gcctccaaacgatgacaccattgcataacactagcaagaattttgctgaa
agacccttgatatagctgtcctcttgggagactaatgccggctagcaaac
acagaagtggatgccccacagtcagctattgattgatcacaggctccatt
gagatctaagaaagtatcgaggagctaagagatctgcaccctgtaggtgc
caacacttatgaactaacagtaccgggagctctgaccttagctgctattg
tatcaaagagatggctatcgcctatacctggtaaatgagagtaattgaaa
ctcaatttaattgcccatacgaaccatgcaaagtggactgtggtagtagc
ata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_17631781_17632620
seq2: B6Ng01-126D24.b_48_887 (reverse)

seq1  CAACCCCAGCTCCTCTACCCACCTACTCCCACTTCTTGGCCCTGGTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCCAGCTCCTCTACCCACCTACTCCCACTTCTTGGCCCTGGTGTTT  50

seq1  CCACTGTACTGTGTCATATAAAGTTTGCAAGACCAAGGGGCCTCTCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTACTGTGTCATATAAAGTTTGCAAGACCAAGGGGCCTCTCTTCC  100

seq1  CAATGATGGCCGACTAGGCTATCTTCTGCTACATATGCAGCTAGAGACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATGGCCGACTAGGCTATCTTCTGCTACATATGCAGCTAGAGACAC  150

seq1  TAGCTCTGGGGGTACTGGTTAGTTCATATTGTTTTTCCACCTATAGGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTGGGGGTACTGGTTAGTTCATATTGTTTTTCCACCTATAGGGTT  200

seq1  GCAGAACCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCTTGTATTGAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAACCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCTTGTATTGAGGG  250

seq1  CCCTGTGTTCCATCCTATAGATAACTGTGAGCATCCACTTCTGTGTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGTTCCATCCTATAGATAACTGTGAGCATCCACTTCTGTGTTTGT  300

seq1  CAGACACTGGCATAGCCTCATACAAGACACCTATATCAGGGTCCTTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACTGGCATAGCCTCATACAAGACACCTATATCAGGGTCCTTTCAG  350

seq1  CAAAATCTTGCTGGCATATGCAATAGTGTCTGGAAAAACAAAGTTCTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCTTGCTGGCATATGCAATAGTGTCTGGAAAAACAAAGTTCTACA  400

seq1  TGATCTATATATAGAGATGATTGATCATAGGTCAGTTATCAGACTTCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTATATATAGAGATGATTGATCATAGGTCAGTTATCAGACTTCTAA  450

seq1  GGATAAACATAAGAAGTTATTTTTTATATTTCCCCAGAAGTGCAAATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAACATAAGAAGTTATTTTTTATATTTCCCCAGAAGTGCAAATCAC  500

seq1  AGTAAGTAGATGATTATTAAAAAGTTAGCCAAGATCCGACACTAATATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTAGATGATTATTAAAAAGTTAGCCAAGATCCGACACTAATATTA  550

seq1  TTTTCTTGCTTATTAAGAAAGCATAAGAAAATTTAATAATAAGAAAACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTGCTTATTAAGAAAGCATAAGAAAATTTAATAATAAGAAAACAG  600

seq1  CTAGTTCTAGGGAAGAATATGATTAACAGACAGACAATAAACTTGATGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTCTAGGGAAGAATATGATTAACAGACAGACAATAAACTTGATGTA  650

seq1  TATGCGAATAAATGTCAGGTTAGCCATTGTGTTCTGCATAGCTAAGTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCGAATAAATGTCAGGTTAGCCATTGTGTTCTGCATAGCTAAGTATA  700

seq1  CTAATGTTCTTCCCTCAGCAAATATTTGCCTCATGTCCTTCACTCAAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTTCTTCCCTCAGCAAATATTTGCCTCATGTCCTTCACTCAAATG  750

seq1  AGAAAATATAATTGCTCCATAGAATTCATATTTTAAAGTGACAAATCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATATAATTGCTCCATAGAATTCATATTTTAAAGTGACAAATCATT  800

seq1  ACATAGATCTAAGCAGAAATTACCCAAAACAGTTGAATTC  840
      ||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGATCTAAGCAGAAATTACCCAAAACAGTTGAATTC  840