BAC Information

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BAC

Clone NameB6Ng01-128G21
Chromosome5 (Build37)
Map Location 142,694,032 - 142,695,211
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC623466, Sdk1
Downstream geneLOC666727, Foxk1, C330006K01Rik, D930005D10Rik, Papolb, Mmd2, Wipi2, Slc29a4, Tnrc18, LOC100038954, LOC100041004, LOC100038972, LOC100038984, LOC100042525, LOC100038888, Zfp469, LOC666788, Fbxl18, D430018E03Rik, LOC100042558, Actb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128G21.bB6Ng01-128G21.g
ACCDH930283DH930284
length1,15197
definitionDH930283|Mus musculus domesticus DNA, BAC clone: B6Ng01-128G21, 5' end.DH930284|Mus musculus domesticus DNA, BAC clone: B6Ng01-128G21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaggccagactggacaatttcagacattatctcaaaataaatac
taaaaggggactgactaacagtatagttcagtggtagagcccctgcctag
aatcccccagtgagggctggggttgtggctcagtggcagagcccctacct
agaatcctccagtgagggctggggttgtggctcagtggcagaataccttc
ctcggatataggagttcctgatttctgtctccagaactgaaaataagcag
ttccaggaatgatgcaatgaacatgaaggagccaatggtaaggaacagag
aaaagttggctcttcaggggctctggaaattaacagagcaagatgtgagg
aggtctttgtcctgtggctcaggagtaaacactcagggctttcgtgactc
ttcagtttcccctttctatagataggctgaaaggaaccacatttctacta
gactgaggagttgtgagcagagaactcttcagtcctgcttcctacccagg
agcatgtgcagtccaggaggctaagcgtagaggtggatctgtgcataaat
gccacccagtgtggctgagagttcagggctgggagacactaagggaccag
aaactcagggaagagccttccgccaagaggacgactcctcctctcacccc
atcagcctcgccctcccaagagggtattaaagatcctttggagtggaaag
ataagaggaagcagtaagggtgtgctgagatggttggctccatcagtaaa
caagtgtgaggagctgagttcaaatccccaggagccatgtaacaacaaca
acaacaacaatgcctgtagaggcacatgcctgcactcccagctctgggga
ggtggagacagatggatagctggtatgacagagcgtccagcccaacctac
ttggtcagctccaagccattgagaagctccgtctcaaacgaagagaagga
ggagaggacgggaggtaggtggcacctgaggatgacacaaagttgtcctc
tgacctcacatgccaagcacactgcatgccaccgaaaacaaattttcact
acacactaaaaaatattcaaagaggcaatatggtcaaaatagtcccgatg
aatttcagtaataataaaatattataggaagcatggctcagcatgataac
a
agttaggctcacttaaggatccttccgactctttcccagtgctgaaattc
cagccgcgctccgttgcatccaggtttttttggggggtggggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_142694032_142695211
seq2: B6Ng01-128G21.b_46_1196

seq1  GAATTCTAGGCCAGACTGGACAATTTCAGACATTATCTCAAAATAAATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCCAGACTGGACAATTTCAGACATTATCTCAAAATAAATAC  50

seq1  TAAAAGGGGACTGACTAACAGTATAGTTCAGTGGTAGAGCCCCTGCCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGGGACTGACTAACAGTATAGTTCAGTGGTAGAGCCCCTGCCTAG  100

seq1  AATCCCCCAGTGAGGGCTGGGGTTGTGGCTCAGTGGCAGAGCCCCTACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCCCAGTGAGGGCTGGGGTTGTGGCTCAGTGGCAGAGCCCCTACCT  150

seq1  AGAATCCTCCAGTGAGGGCTGGGGTTGTGGCTCAGTGGCAGAATACCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCTCCAGTGAGGGCTGGGGTTGTGGCTCAGTGGCAGAATACCTTC  200

seq1  CTCGGATATAGGAGTTCCTGATTTCTGTCTCCAGAACTGAAAATAAGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGATATAGGAGTTCCTGATTTCTGTCTCCAGAACTGAAAATAAGCAG  250

seq1  TTCCAGGAATGATGCAATGAACATGAAGGAGCCAATGGTAAGGAACAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGAATGATGCAATGAACATGAAGGAGCCAATGGTAAGGAACAGAG  300

seq1  AAAAGTTGGCTCTTCAGGGGCTCTGGAAATTAACAGAGCAAGATGTGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTGGCTCTTCAGGGGCTCTGGAAATTAACAGAGCAAGATGTGAGG  350

seq1  AGGTCTTTGTCCTGTGGCTCAGGAGTAAACACTCAGGGCTTTCGTGACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTTGTCCTGTGGCTCAGGAGTAAACACTCAGGGCTTTCGTGACTC  400

seq1  TTCAGTTTCCCCTTTCTATAGATAGGCTGAAAGGAACCACATTTCTACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTTCCCCTTTCTATAGATAGGCTGAAAGGAACCACATTTCTACTA  450

seq1  GACTGAGGAGTTGTGAGCAGAGAACTCTTCAGTCCTGCTTCCTACCCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGGAGTTGTGAGCAGAGAACTCTTCAGTCCTGCTTCCTACCCAGG  500

seq1  AGCATGTGCAGTCCAGGAGGCTAAGCGTAGAGGTGGATCTGTGCATAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTGCAGTCCAGGAGGCTAAGCGTAGAGGTGGATCTGTGCATAAAT  550

seq1  GCCACCCAGTGTGGCTGAGAGTTCAGGGCTGGGAGACACTAAGGGACCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCCAGTGTGGCTGAGAGTTCAGGGCTGGGAGACACTAAGGGACCAG  600

seq1  AAACTCAGGGAAGAGCCTTCCGCCAAGAGGACGACTCCTCCTCTCACCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAGGGAAGAGCCTTCCGCCAAGAGGACGACTCCTCCTCTCACCCC  650

seq1  ATCAGCCTCGCCCTCCCAAGAGGGTATTAAAGATCCTTTGGAGTGGAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCCTCGCCCTCCCAAGAGGGTATTAAAGATCCTTTGGAGTGGAAAG  700

seq1  ATAAGAGGAAGCAGTAAGGGTGTGCTGAGATGGTTGGCTCCATCAGTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAGGAAGCAGTAAGGGTGTGCTGAGATGGTTGGCTCCATCAGTAAA  750

seq1  CAAGTGTGAGGAGCTGAGTTCAAATCCCCAGGAGCCATGTAACAACAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTGAGGAGCTGAGTTCAAATCCCCAGGAGCCATGTAACAACAACA  800

seq1  ACAACAACAATGCCTGTAGAGGCACATGCCTGCACTCCCAGCTCTGGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACAATGCCTGTAGAGGCACATGCCTGCACTCCCAGCTCTGGGGA  850

seq1  GGTGGAGACAGATGGATAGCTGGTATGACAGAGCGTCCAGCCCAACCTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGACAGATGGATAGCTGGTATGACAGAGCGTCCAGCCCAACCTAC  900

seq1  TTGGTCAGCTCCAAGCCATTGAGAAGCTCCGTCTCAAAACGAAGAGAAGG  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTGGTCAGCTCCAAGCCATTGAGAAGCTCCGTCTC-AAACGAAGAGAAGG  949

seq1  AGGGAGAGGACGGGAGGTAGGTGGCACCTGAGGAATGACACAGAGGTTGT  1000
      | ||||||||||||||||||||||||||||||| |||||||| | |||||
seq2  A-GGAGAGGACGGGAGGTAGGTGGCACCTGAGG-ATGACACA-AAGTTGT  996

seq1  CCTCTGACCTCCACATGCACAAGCACACATGCATGCACACGAAAACAAAA  1050
      |||||||||| ||||||| ||||||||| |||||||   |||||||||| 
seq2  CCTCTGACCT-CACATGC-CAAGCACAC-TGCATGCCACCGAAAACAAA-  1042

seq1  TTTTTTCACATACACACTAAAAAATATTTCAAAGGAAGCAAATATGGTCA  1100
        ||||||| |||||||||||||||| |||||||  ||  ||||||||||
seq2  --TTTTCAC-TACACACTAAAAAATA-TTCAAAG--AGGCAATATGGTCA  1086

seq1  AAATATATTCATGAATGGAATTATCAAATAATTAATAAAATATATATTTA  1150
      ||  ||| ||  ||   ||||| || | ||| ||||||||||     |||
seq2  AA--ATAGTCCCGA--TGAATT-TC-AGTAA-TAATAAAATA-----TTA  1124

seq1  TAAGGAAGGCATGGGCTGAGCATGATAACA  1180
      | ||||| |||| |||| ||||||||||||
seq2  T-AGGAA-GCAT-GGCTCAGCATGATAACA  1151