BAC Information

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BAC

Clone NameB6Ng01-128I17
Chromosome5 (Build37)
Map Location 95,103,885 - 95,104,956
singlet/doubletsinglet
Overlap geneLOC621203
Upstream geneLOC666075, LOC666077, LOC666081, EG665802, LOC100040408, LOC100040981, EG622719, LOC100041003, BC061212, EG622744, LOC100041032, LOC100041042, LOC624421, AA792892, LOC665521, LOC665551, LOC100041102, LOC665560, LOC100041115, LOC624507
Downstream geneLOC100041153, LOC665499, LOC624698, LOC100041179, LOC624655, LOC100041166, LOC665469, LOC622894, EG666121, LOC666125, EG666133, LOC100041296, LOC100041253, LOC100041264, EG624049, EG666159, LOC666164, EG666169, D5Ertd577e, LOC100041354, LOC100040503, LOC666187, EG622731, LOC100041380
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128I17.bB6Ng01-128I17.g
ACCDH930367DH930368
length1,2661,082
definitionDH930367|Mus musculus domesticus DNA, BAC clone: B6Ng01-128I17, 5' end.DH930368|Mus musculus domesticus DNA, BAC clone: B6Ng01-128I17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacagaggaaattcaaaatgccaagaagcacctaaagaaatg
gttcaacacccttagtcatccgggaaatgaaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaactcaggtgacag
caaatgctgatgaggatgtggaaaaagaggaaaacccctccactgctggt
gggattgcaggctggtacaattattttggaaataagtctctctctgttcc
tcagaaaatttgacatagtcctaccagagtatccagctataccacacatg
ggcatatattcagaagatgctccaccacgtaataaggatactttctctac
tatgttcatagtagccttatttataatagccagaagctggaaagaacctt
gatgctcttcaacaaaggaatggatacaaaacatgtggtacatttacaca
gtggagtattactcagcctttaaaaagaatgaatttatgaaattcctagg
caaatggttggacctggagggccttatcctgagtgaggtaacccaataac
aaaagaacacacatggtccgcaatcactgatttgttgacattaggccaaa
acctaggaataaccaagatacaattcacagactacatgaagctcaagaag
aagaaaaaccaaagtgtgggtactttggcccttcttagatagaggaacta
aatattcacaggagcaaatatggagacaaagtatggagcagagactgaaa
gaaagtctacctagaaactgcaccacctgggaatccatgccatatacagt
caccaaacccagacactattgtggatgccaaaaagtgcaagctgacagga
acctgatatagctctcctgagaggctctgccagaacctgagaaatacaga
gccagatgctcacatccaaccattgggctaagcataggctccccaatgga
agagttagggaaaggactgaggagctgaagggtttaaatcccataggaga
acagcatatcacacagaaccccagagttccagggactaactatcaacgaa
gacatggaggaccatgttctctccccatatatagccaagatgcattattg
ggcatcaataggagaaaaggccttgggtttctgagctctatgtaagtatg
gggattcatggccgggggaaaagagtacttgaatgtaatagagttccgat
agcggatgcagtagatgagaaagtagtaggagtagcaaggctcacgcact
ggttccctcttaatgc
gaattccatgccaaggatagaacacagtaggaatggtttcagcataatgc
taggagtgctgcccaggtgactttcatcttctgtttcatgctcttcagag
tagaaggatggagagcctggcaggtgttgtaattgtttgtttctttgctt
gtgatttctgtctagttgagtgtttctctggtgttggctgaggctgagat
cctgctgccaagccctgttctctttctggccatgaaacttctagcccctt
tgctggtctgtttctaagagcttttattctggtggcttgcttccctctac
cacctatgcaggtgtagcagctgcttcacagttgtgcccttagtatttag
catttacatcttcctagcccacacaattcctttgcattgctaaccctgag
cctccacagtaggaactgggaatgaacacttgtgagcctcagagcaaaac
ctgctttctgccccaatccaagaacagccatttttttccttgcttggcag
ttgtactcaaaaaggcacaggccagaaactgaagacttgaatccaaagga
actgttgagcttggctgataaatttttatgttgagatctttactcaattg
acttgagagtattggaggatgataaatacgaagcaacttgctttcttaaa
catgcagatatcctgttagacaggcaccatttgataggggatgatttctt
ttttccaatgtctcttttgaattctctattaaaaatctagtgtccaggtc
ttcagtttcatttctttgatcaacctattttcctgccaacacaatgcagt
tttcactatactatggctatgtagtataacttcagatcagaaatggtgat
acttctagaacatcataatattatagaggattatggtcttcaggctcagt
tcaaaggttgcctgtgagtgtctgtaatatcttagacaggtgatagcaga
tctctcagaggacggccatacctggatcctttatgtagtagattttgtca
tagcaataatgttaggggttgatgtctcctaatgagaattgatcccaaaa
tccctggtgtctggatgtcccttcttcagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_95103885_95104956
seq2: B6Ng01-128I17.g_65_1136

seq1  GAATTCCATGCCAAGGATAGAACACAGTAGGAATGGTTTCAGCATAATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCCAAGGATAGAACACAGTAGGAATGGTTTCAGCATAATGC  50

seq1  TAGGAGTGCTGCCCAGGTGACTTTCATCTTCTGTTTCATGCTCTTCAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGTGCTGCCCAGGTGACTTTCATCTTCTGTTTCATGCTCTTCAGAG  100

seq1  TAGAAGGATGGAGAGCCTGGCAGGTGTTGTAATTGTTTGTTTCTTTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TAGAAGGATGGAGAGCCTGGCAGGTGTTGTAATTGTTTGTTTCTTTGCTT  150

seq1  GTGATTTCTGTCTAGTTGAGTGTTTCTCTGGTGTTGGCTGAGGCTGAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTCTGTCTAGTTGAGTGTTTCTCTGGTGTTGGCTGAGGCTGAGAT  200

seq1  CCTGCTGCCAAGCCCTGTTCTCTTTCTGGCCATGAAACTTCTAGCCCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTGCCAAGCCCTGTTCTCTTTCTGGCCATGAAACTTCTAGCCCCTT  250

seq1  TGCTGGTCTGTTTCTAAGAGCTTTTATTCTGGTGGCTTGCTTCCCTCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTCTGTTTCTAAGAGCTTTTATTCTGGTGGCTTGCTTCCCTCTAC  300

seq1  CACCTATGCAGGTGTAGCAGCTGCTTCACAGTTGTGCCCTTAGTATTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTATGCAGGTGTAGCAGCTGCTTCACAGTTGTGCCCTTAGTATTTAG  350

seq1  CATTTACATCTTCCTAGCCCACACAATTCCTTTGCATTGCTAACCCTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACATCTTCCTAGCCCACACAATTCCTTTGCATTGCTAACCCTGAG  400

seq1  CCTCCACAGTAGGAACTGGGAATGAACACTTGTGAGCCTCAGAGCAAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACAGTAGGAACTGGGAATGAACACTTGTGAGCCTCAGAGCAAAAC  450

seq1  CTGCTTTCTGCCCCAATCCAAGAACAGCCATTTTTTTCCTTGCTTGGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTCTGCCCCAATCCAAGAACAGCCATTTTTTTCCTTGCTTGGCAG  500

seq1  TTGTACTCAAAAAGGCACAGGCCAGAAACTGAAGACTTGAATCCAAAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACTCAAAAAGGCACAGGCCAGAAACTGAAGACTTGAATCCAAAGGA  550

seq1  ACTGTTGAGCTTGGCTGATAAATTTTTATGTTGAGATCTTTACTCAATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGAGCTTGGCTGATAAATTTTTATGTTGAGATCTTTACTCAATTG  600

seq1  ACTTGAGAGTATTGGAGGATGATAAATACGAAGCAACTTGCTTTCTTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGAGTATTGGAGGATGATAAATACGAAGCAACTTGCTTTCTTAAA  650

seq1  CATGCAGATATCCTGTTAGACAGGCACCATTTGATA-GGGATGATTTCTT  699
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CATGCAGATATCCTGTTAGACAGGCACCATTTGATAGGGGATGATTTCTT  700

seq1  TTTTCCAATGTCTCTTTTGAATTCTCTATTAAAAATCTAGTGTCCAGGTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAATGTCTCTTTTGAATTCTCTATTAAAAATCTAGTGTCCAGGTC  750

seq1  TTCAGTTTCATTTCTTTGATCAACCTATTTTCCTGCCAACACAATGCAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTTCATTTCTTTGATCAACCTATTTTCCTGCCAACACAATGCAGT  800

seq1  TTTCACTATACTATGGCTATGTAGTATAACTTCAGATCAGAAATGGTGAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTATACTATGGCTATGTAGTATAACTTCAGATCAGAAATGGTGAT  850

seq1  ACTTCTAGAACATCAT-ATATTATAGAGGATTATGGTCTTCAGGCTCAGT  898
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACTTCTAGAACATCATAATATTATAGAGGATTATGGTCTTCAGGCTCAGT  900

seq1  TCAAAGGTTGCCTGTGAGTGTCTGTAATTATCTTAGACAGGTGATAGCAG  948
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCAAAGGTTGCCTGTGAGTGTCTGTAA-TATCTTAGACAGGTGATAGCAG  949

seq1  ATCCTCTCAGAGGACGGCCATACCTGGATCCTTTATGTAAGTAGATCTTG  998
      || ||||||||||||||||||||||||||||||||||| ||||||| |||
seq2  AT-CTCTCAGAGGACGGCCATACCTGGATCCTTTATGT-AGTAGATTTTG  997

seq1  TCATTAGCAATAATGTAGGGGTTTGATGTCTCCTAATGAG-ATTGATCCC  1047
      ||| ||||||||||||  ||| |||||||||||||||||| |||||||||
seq2  TCA-TAGCAATAATGTTAGGGGTTGATGTCTCCTAATGAGAATTGATCCC  1046

seq1  AAAATCCCT-GTGTCTGGATGGCCCT  1072
      ||||||||| ||||||||||| ||||
seq2  AAAATCCCTGGTGTCTGGATGTCCCT  1072