BAC Information

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BAC

Clone NameB6Ng01-131A07
Chromosome5 (Build37)
Map Location 95,107,661 - 95,108,800
singlet/doubletsinglet
Overlap geneLOC621203
Upstream geneLOC666075, LOC666077, LOC666081, EG665802, LOC100040408, LOC100040981, EG622719, LOC100041003, BC061212, EG622744, LOC100041032, LOC100041042, LOC624421, AA792892, LOC665521, LOC665551, LOC100041102, LOC665560, LOC100041115, LOC624507
Downstream geneLOC100041153, LOC665499, LOC624698, LOC100041179, LOC624655, LOC100041166, LOC665469, LOC622894, EG666121, LOC666125, EG666133, LOC100041296, LOC100041253, LOC100041264, EG624049, EG666159, LOC666164, EG666169, D5Ertd577e, LOC100041354, LOC100040503, LOC666187, EG622731, LOC100041380
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131A07.bB6Ng01-131A07.g
ACCDH932182DH932183
length1,1271,076
definitionDH932182|Mus musculus domesticus DNA, BAC clone: B6Ng01-131A07, 5' end.DH932183|Mus musculus domesticus DNA, BAC clone: B6Ng01-131A07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggtttggcaacaagtgccattgaccattgagatatctcacagt
ctactaggctccctaaaatttttttcttaaaaacactattttttttttca
ttttttgtttttagctttttcaagacagggtttctgtttaacagatctga
ctgatccagaacttactctgtaaaacaggctagctcaaattcagaggtcc
acctacttctgcgtccttaattctgggatgaaaggcttatagtagcacct
catggctaaagcagattttggttttatttcttcgatttggattggatttg
agagagagagtttccctattttacaggtttccctgttccacactttaacc
tgtagatcagtatgggccctataggtccacatccctctgcctgcagggtg
ctgggattaaagttatgtgcaacccatcccagctctgctttaattataaa
acagatccttagtcaataggcttcactggttaataattagctacttagat
aaagctagccttgaactcactgagcccaatctacctttgcctcaagagtt
cagggattaaaggtgtttgccgccattctacttacagatttatttctctt
aaagatttttttctctgtgtttttggtgttttctgtgcatatatgaatgt
gcaccacatgtatgcctgatgcccacattgttgagaaggagggttcagat
ttcaaggaactggattcacagatcatttcaatccaccatgtaggtgctca
gaatagaatattaacaggtgctcattattgaggatccaactcctcagcac
aggtcccactcctgatttcatcttgggcaaacatgctggtctgatcctac
ctgacacattatctgttttctgtctacaaagggcagcatcagcctcagac
cctctgttttctgtttctctttagtctatttaaaaacagaatcacatgta
gtctcagatgtccctctatttacatatggctgagatgggttttaattgat
cctccctccaactcttgattgtgagtttcaggcatgctgtcaaaatctgc
tgcatgcactgctcaagaggaactcctgtaatgtttgtagctccctacaa
ctgagtgtacactcagccacttggaca
gaattccatgatcgtgggcccactgtcatacttctctggctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagataag
gcattctgtcagtccgtgaatggtggttttagcagaggcattacgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccacgaaggaagtggtccaatgtagtcaacctgccacca
ggttgctggctggtcacctcaaggaatggtgccatatctggggctcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagctgtagccagg
tcagccttggtgagtggaagcccatgttgctgagcccaagcataacctcc
atctcgaccaccatggccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagagaggctgattgtccacagaacgggtcatcttatcc
acttgattattgaactcctcctcagctgaagtcaccttttggtgagcatt
tacatgggacacaaatatcttcacatcctttgcccatttggagagatcta
tccacatacttcttccccagatgtctttctcaccaattttccaattgtga
tctttccaagtccctgaccatccagccaatccattggctacagcccatga
gtcagtgtataatcgtacatctggccatttcttcttgcaaacaaactgta
taccatgtgtactgcccgaagttctgcccactgtgaagatttccctttca
cctgtgtctttcaaggttgtcccagaaaagggttgttatgctgcagctgt
ccacttctgggtggtgccttgcataacgggcagagcatcagtaaccaggc
tctagtcttcttctcttcggtcagttgatcatagggaacaccccatgagg
ctaaggtgcatgcttgggagcagatggaatgtacgtgatataaaccatag
gcttttgagcacttctcattaacttgcctttgccttcaggaacggtctgg
cccgatcaggttataccccttcattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_95107661_95108800
seq2: B6Ng01-131A07.b_46_1172

seq1  GAATTCAGGTTTGGCAACAAGTGCCATTGACCATTGAGATATCTCACAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTTTGGCAACAAGTGCCATTGACCATTGAGATATCTCACAGT  50

seq1  CTACTAGGCTCCCTAAAATTTTTTTCTTAAAAACACTATTTTTTTTTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAGGCTCCCTAAAATTTTTTTCTTAAAAACACTATTTTTTTTTTCA  100

seq1  TTTTTTGTTTTTAGCTTTTTCAAGACAGGGTTTCTGTTTAACAGATCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTTTTTAGCTTTTTCAAGACAGGGTTTCTGTTTAACAGATCTGA  150

seq1  CTGATCCAGAACTTACTCTGTAAAACAGGCTAGCTCAAATTCAGAGGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCCAGAACTTACTCTGTAAAACAGGCTAGCTCAAATTCAGAGGTCC  200

seq1  ACCTACTTCTGCGTCCTTAATTCTGGGATGAAAGGCTTATAGTAGCACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTTCTGCGTCCTTAATTCTGGGATGAAAGGCTTATAGTAGCACCT  250

seq1  CATGGCTAAAGCAGATTTTGGTTTTATTTCTTCGATTTGGATTGGATTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTAAAGCAGATTTTGGTTTTATTTCTTCGATTTGGATTGGATTTG  300

seq1  AGAGAGAGAGTTTCCCTATTTTACAGGTTTCCCTGTTCCACACTTTAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGTTTCCCTATTTTACAGGTTTCCCTGTTCCACACTTTAACC  350

seq1  TGTAGATCAGTATGGGCCCTATAGGTCCACATCCCTCTGCCTGCAGGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATCAGTATGGGCCCTATAGGTCCACATCCCTCTGCCTGCAGGGTG  400

seq1  CTGGGATTAAAGTTATGTGCAACCCATCCCAGCTCTGCTTTAATTATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTAAAGTTATGTGCAACCCATCCCAGCTCTGCTTTAATTATAAA  450

seq1  ACAGATCCTTAGTCAATAGGCTTCACTGGTTAATAATTAGCTACTTAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCCTTAGTCAATAGGCTTCACTGGTTAATAATTAGCTACTTAGAT  500

seq1  AAAGCTAGCCTTGAACTCACTGAGCCCAATCTACCTTTGCCTCAAGAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTAGCCTTGAACTCACTGAGCCCAATCTACCTTTGCCTCAAGAGTT  550

seq1  CAGGGATTAAAGGTGTTTGCCGCCATTCTACTTACAGATTTATTTCTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATTAAAGGTGTTTGCCGCCATTCTACTTACAGATTTATTTCTCTT  600

seq1  AAAGATTTTTTTCTCTGTGTTTTTGGTGTTTTCTGTGCATATATGAATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTTTTTTCTCTGTGTTTTTGGTGTTTTCTGTGCATATATGAATGT  650

seq1  GCACCACATGTATGCCTGATGCCCACATTGTTGAGAAGGAGGGTTCAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCACATGTATGCCTGATGCCCACATTGTTGAGAAGGAGGGTTCAGAT  700

seq1  TTCAAGGAACTGGATTCACAGATCATTTCAATCCACCATGTAGGTGCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGAACTGGATTCACAGATCATTTCAATCCACCATGTAGGTGCTCA  750

seq1  GAATAGAATATTAACAGGTGCTCATTATTGAGGATCCAACTCCTCAGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGAATATTAACAGGTGCTCATTATTGAGGATCCAACTCCTCAGCAC  800

seq1  AGGTCCCACTCCTGATTTCATCTTGGGCAAACATGCTGGTCTGATCCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCCACTCCTGATTTCATCTTGGGCAAACATGCTGGTCTGATCCTAC  850

seq1  CTGACACATTATCTGTTTTCTGTCTACAAAGGGCAGCATCAGCCTCAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACATTATCTGTTTTCTGTCTACAAAGGGCAGCATCAGCCTCAGAC  900

seq1  CCTCTGTTTTCTGTTTCTCTTTAGGTCTATTTAAAAACAGAATCACATGT  950
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CCTCTGTTTTCTGTTTCTCTTTA-GTCTATTTAAAAACAGAATCACATGT  949

seq1  AAGTCTCAGGATGTCCCTCTATTTACAATATGGCTGAGGATGGGTTTTAA  1000
       ||||||| ||||||||||||||||| |||||||||| ||||||||||||
seq2  -AGTCTCA-GATGTCCCTCTATTTAC-ATATGGCTGA-GATGGGTTTTAA  995

seq1  TTGATCCCTCACTCCCAACTCTTGAATTGTGAGTTTCCAGGCATGGCTGT  1050
      ||||| |||| || |||||||||| ||||||||||| ||||||| |||||
seq2  TTGAT-CCTCCCT-CCAACTCTTG-ATTGTGAGTTT-CAGGCAT-GCTGT  1040

seq1  C-ATATCTGCTGCATGCACTGCTCCAAAGAGGACTCCCTGT-ATGTTTGG  1098
      | | ||||||||||||||||||||  |||||||   ||||| |||||| |
seq2  CAAAATCTGCTGCATGCACTGCTC--AAGAGGAACTCCTGTAATGTTT-G  1087

seq1  TAGCTCCCTACAAACTGAGTGTACACCCAGCACACTTGGACA  1140
      ||||||||||| |||||||||||||| |||| ||||||||||
seq2  TAGCTCCCTAC-AACTGAGTGTACACTCAGC-CACTTGGACA  1127