BAC Information

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BAC

Clone NameB6Ng01-131B19
Chromosome5 (Build37)
Map Location 56,024,260 - 56,024,902
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666377, LOC666380, EG666405
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131B19.g
ACCDH932254
length953
definitionDH932254|Mus musculus domesticus DNA, BAC clone: B6Ng01-131B19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggcttgtgaaagagcaacgattgatttgtaacttttgaagca
tctagcagtccctctccatatttttattgacaaatttaaaggctaatttc
ataaaaaaatactaaatcaattgatattagtcttatatataacttgaatc
tcttagataggccaaaaagacaattgagtgttttaaaaagctcttctgca
ttgtttgctattatatatagcaatctgagccataactttaatatatatgt
atatatgtaagtaacatatatatatatatatatatatatatatgtatatc
tatatatatatatatataagatctgatattttgaatggtaagcactaaac
atccaaagctaatctctgctctttcctatttaaagtcttaactttatact
ccttcacaagggctaaaaacagtcctaaataggcttctaaaaaatctaaa
tttcaaaatttacaagtcagtttcacaaaaattgtcttaactatactata
cttaactataataagaacatccaaatataccacttgttttaaagttggag
gaacatgggctttgatagtcatgacactggttcccatgaattcttgtttt
ctgaaagtgtattcataaaaaatcagtaatacatattaacataaagcttc
aatcactttctcaaactgcctttgatgaaacctataaagattatgaaaca
agagaggcaactgttttttattagatattttcttcatctacatttcaaat
gctatcccaaaagtcccctctaccctcccctgcctgctccccaacccacc
cacttctgctttcctgccctggcatttcccctgtactgggcatataatct
ttgcagaccaagggactcttctcccattgatggcctactagatcatctct
gctatatatgcaatagagacacagctcctggtgttgtgtggctactgttt
agt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_56024260_56024902
seq2: B6Ng01-131B19.g_383_1019

seq1  TAAGATCTGATATTTTGAATGGTAAGCACTAAACATCCAAAGCTAATCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATCTGATATTTTGAATGGTAAGCACTAAACATCCAAAGCTAATCTC  50

seq1  TGCTCTTTCCTATTTAAAGTCTTAGCTTTATACTCCTTCAGAAGGGCTAA  100
      |||||||||||||||||||||||| ||||||||||||||| |||||||||
seq2  TGCTCTTTCCTATTTAAAGTCTTAACTTTATACTCCTTCACAAGGGCTAA  100

seq1  AAACAGTCCTAAATAGTCTTCTAAAAAATCTAAATTTCAAAATTTACAAG  150
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAACAGTCCTAAATAGGCTTCTAAAAAATCTAAATTTCAAAATTTACAAG  150

seq1  TCAGTTTCACAAAAATTGTCTTAACTATACTATACTTAACTATAATAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTCACAAAAATTGTCTTAACTATACTATACTTAACTATAATAAGA  200

seq1  ACATCCAAATATACCACTTGTTTTAAAGTTGGAGGAACATGGGCTTTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCAAATATACCACTTGTTTTAAAGTTGGAGGAACATGGGCTTTGAT  250

seq1  AGTCATGACACTGGTTCCCATGAATTCTTGTTTTCTGAAAGTGTATTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGACACTGGTTCCCATGAATTCTTGTTTTCTGAAAGTGTATTCAT  300

seq1  AAAAAATCAGTAATACATATTAACATAAAGCTTCAATCACTTTCTCAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATCAGTAATACATATTAACATAAAGCTTCAATCACTTTCTCAAAC  350

seq1  TGCCTTTGTTGAAACCTATAAAGATTATGAAACAAGAGAGGCAACTGTTT  400
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTGATGAAACCTATAAAGATTATGAAACAAGAGAGGCAACTGTTT  400

seq1  TTTATTAGATATTTTCTTCATCTACATTTCAAATGCTATCCCAAAAGTTC  450
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTATTAGATATTTTCTTCATCTACATTTCAAATGCTATCCCAAAAGTCC  450

seq1  CCTCTACCCTCCCCTGCCCTGCTCCCCAACCCACCCACTCCTGCTTCCTG  500
      |||||||||||||||| |||||||||||||||||||||| |||||| |  
seq2  CCTCTACCCTCCCCTG-CCTGCTCCCCAACCCACCCACTTCTGCTTTCCT  499

seq1  GCCCTGGCATTCCCCCTGTACTGGGGCATATAATCTTTGCAAGACCAAGG  550
      ||||||||||| |||||||||| ||||||||||||||||| |||||||||
seq2  GCCCTGGCATTTCCCCTGTACT-GGGCATATAATCTTTGC-AGACCAAGG  547

seq1  GACTCTTCTCCCATTGATGGCCTACTAGATCATCCTCTGCTATATATGCA  600
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GACTCTTCTCCCATTGATGGCCTACTAGATCAT-CTCTGCTATATATGCA  596

seq1  ATTAGAGACACAAGCT-CTGGTGTGTGTGTGGCTACTGTTTAGT  643
      | ||||||||| |||| ||||||| |||||||||||||||||||
seq2  A-TAGAGACAC-AGCTCCTGGTGT-TGTGTGGCTACTGTTTAGT  637