BAC Information

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BAC

Clone NameB6Ng01-131F21
Chromosome5 (Build37)
Map Location 32,535,788 - 32,682,552
singlet/doubletdoublet
Overlap genePlb1
Upstream geneENSMUSG00000055424, Nrbp1, Krtcap3, Ift172, Fndc4, Gckr, Zfp512, 4930548H24Rik, Xab1, Supt7l, Slc4a1ap, Mrpl33, Rbks, LOC100040000, Bre, Fosl2, LOC672217
Downstream geneEG665350, LOC545743, Ppp1cb, LOC634553, LOC675983, Yes1, LOC100039775, Pisd, C330019G07Rik, LOC100040141, Depdc5, Ywhah, LOC100040169, Slc5a1, Spon2, Ctbp1, Maea
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131F21.bB6Ng01-131F21.g
ACCDH932442DH932443
length1,107578
definitionDH932442|Mus musculus domesticus DNA, BAC clone: B6Ng01-131F21, 5' end.DH932443|Mus musculus domesticus DNA, BAC clone: B6Ng01-131F21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,681,415 - 32,682,552)(32,535,788 - 32,536,365)
sequence
gaattctcagccccagtttccagggacgtcatgggttttccaagctttaa
ttacaagcctatcttctgcatctttgtccctgccctccgctgccccaaag
gaagcttctagacctttgttgcctctgtgaaacatagtaggttacagagg
aaagcatttggaatcacgtgggtgtgagatgtgaatttaggtatttttct
ggaaatatcttttggctttgctaggcccgtttgtctgtagaatgggctgc
atcctgcactctgtattgagggaatcattccagtaaggtgtggggttgat
aaggtcatgtgctgactgtatccctgaggaggctgggacctggagtcagt
gtccctatttcttactcaccatcccatgcctggttgctcatattgcctag
gttagagagcctctcttattttgaaaacctagatgtcttggagtgaacac
atcttgtatgtcagactggcttttggggtcttaagtgagatagtccagtt
ttcctttcacttgaaaagtcagggtcaatttttgttcctttccttataga
gaccatctatgtcagatattccatcctagagatcaagttttatgcttggc
tactgaaccaaatccttcaatattcatcgaaattataggaagtgctggga
tctggccttgtctaaacactgaccacagataaaatatagtctcatgtctg
ggatcaaagtgtgctcaggagccgggcatggtggcacaagcctttaatcc
cagcacttgggaggcagaggcagacgaatctctgagtttgaggccagcct
ggtctacaaagtgagttccaggatagccagggccatacagagaaaccctg
tcttgaaaaacaacaacaaaacaaaaacaacacaacaccaaaaaaaaaaa
aaaagctaactgagctactagtgagctcagacaatgataggacgccattc
tgtgcttatttcctctctcctccttggactcatgtattctagcagcttca
aacacccataaagccaaagatggacttgaacttccgctcctcagcattgg
gagggaaggccatatgacaacgcactgttctgaatcaagccaggtccgga
tatgctg
gaattctttcctcccacgtgggacctataccttgggaaagtgacattaaa
aacagagataggtgtgggggtgtgatctgggaggagctaatggtccctgc
gaaggtgttctcgggaataattatgagtagacaggatgctcatgtgaaaa
gagttgcccgtgggtagagagctgagctgagatgctgaggaaccttgcat
aagattgttaagattccatcttgctttagatccttgagtcctccataacc
aagcctttgtgtgtgagtacactcatgcactcatgagtatgtgtgagtac
cagcccagatatggtcagaggattcctgcctatctgagtttggaagtctt
ggcattatggacatatgctatcatatctggcttgaagataggtttaggtt
ctggggacctaaacccaggtcctcacatttatatagtgagctttttaccc
actgaactatctcttgaagccaagcctttacttttgtggtcagtttctct
tttctctgctttgtagatctttgcttcacagccaggtaatgacacaattg
ttcttcaggtagggggtgttggtggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_32681415_32682552
seq2: B6Ng01-131F21.b_46_1152 (reverse)

seq1  CAGCATATCCAGAACCCTGGGCTTGATCTCGAGGAACAGTGTCGTTTGTC  50
      |||||||||| ||  ||| |||||||| ||   |||||||| || |||| 
seq2  CAGCATATCCGGA--CCT-GGCTTGAT-TC--AGAACAGTG-CG-TTGT-  41

seq1  CATAATTGTGCCTTCACCTCCCAGATGCTGGAGGAGCTGAAGTTCAGGGT  100
      ||||  || |||||| ||||||| ||||| ||||||| ||||||||  ||
seq2  CATA--TG-GCCTTC-CCTCCCA-ATGCT-GAGGAGCGGAAGTTCA-AGT  84

seq1  CCATCTTTGGCTCTATGGGTTGTTTGAAGCCTGCTTAGAATACATGAGTC  150
      |||||||||||| |||||| ||||||||| |||| |||||||||||||||
seq2  CCATCTTTGGCTTTATGGG-TGTTTGAAG-CTGC-TAGAATACATGAGTC  131

seq1  CCAGGGAGAGAGAGGAAATAAGCACAGAATGGCGTCCTATCCATTTGTCT  200
      | |||  ||||||||||||||||||||||||||||||||||   ||||||
seq2  CAAGGAGGAGAGAGGAAATAAGCACAGAATGGCGTCCTATC--ATTGTCT  179

seq1  GAGCTCACTTAGTAGCTCAGTTTAGCTTTTTTTTTTTTTTTTTGGTTGTT  250
      |||||||| ||||||||||| ||||||||||||||||||      ||| |
seq2  GAGCTCAC-TAGTAGCTCAG-TTAGCTTTTTTTTTTTTT------TTGGT  221

seq1  GTTGTTTGTTTTTTGTTTTTGTTGTTGTTTTTTCAAGACAGGGTTTCTCT  300
      ||||| |  |||||| ||||||||||| ||||||||||||||||||||||
seq2  GTTGTGTTGTTTTTG-TTTTGTTGTTG-TTTTTCAAGACAGGGTTTCTCT  269

seq1  GTATGGCCCTGGCTATCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGCCCTGGCTATCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCA  319

seq1  AACTCAGAGATTCGTCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGAGATTCGTCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCT  369

seq1  TGTGCCACCATGCCCGGCTCCTGAGCACACTTTGATCCCAGACATGAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCACCATGCCCGGCTCCTGAGCACACTTTGATCCCAGACATGAGAC  419

seq1  TATATTTTATCTGTGGTCAGTGTTTAGACAAGGCCAGATCCCAGCACTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTATCTGTGGTCAGTGTTTAGACAAGGCCAGATCCCAGCACTTC  469

seq1  CTATAATTTCGATGAATATTGAAGGATTTGGTTCAGTAGCCAAGCATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAATTTCGATGAATATTGAAGGATTTGGTTCAGTAGCCAAGCATAAA  519

seq1  ACTTGATCTCTAGGATGGAATATCTGACATAGATGGTCTCTATAAGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATCTCTAGGATGGAATATCTGACATAGATGGTCTCTATAAGGAAA  569

seq1  GGAACAAAAATTGACCCTGACTTTTCAAGTGAAAGGAAAACTGGACTATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAAAAATTGACCCTGACTTTTCAAGTGAAAGGAAAACTGGACTATC  619

seq1  TCACTTAAGACCCCAAAAGCCAGTCTGACATACAAGATGTGTTCACTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTAAGACCCCAAAAGCCAGTCTGACATACAAGATGTGTTCACTCCA  669

seq1  AGACATCTAGGTTTTCAAAATAAGAGAGGCTCTCTAACCTAGGCAATATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATCTAGGTTTTCAAAATAAGAGAGGCTCTCTAACCTAGGCAATATG  719

seq1  AGCAACCAGGCATGGGATGGTGAGTAAGAAATAGGGACACTGACTCCAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACCAGGCATGGGATGGTGAGTAAGAAATAGGGACACTGACTCCAGG  769

seq1  TCCCAGCCTCCTCAGGGATACAGTCAGCACATGACCTTATCAACCCCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCCTCCTCAGGGATACAGTCAGCACATGACCTTATCAACCCCACA  819

seq1  CCTTACTGGAATGATTCCCTCAATACAGAGTGCAGGATGCAGCCCATTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACTGGAATGATTCCCTCAATACAGAGTGCAGGATGCAGCCCATTCT  869

seq1  ACAGACAAACGGGCCTAGCAAAGCCAAAAGATATTTCCAGAAAAATACCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAAACGGGCCTAGCAAAGCCAAAAGATATTTCCAGAAAAATACCT  919

seq1  AAATTCACATCTCACACCCACGTGATTCCAAATGCTTTCCTCTGTAACCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCACATCTCACACCCACGTGATTCCAAATGCTTTCCTCTGTAACCT  969

seq1  ACTATGTTTCACAGAGGCAACAAAGGTCTAGAAGCTTCCTTTGGGGCAGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGTTTCACAGAGGCAACAAAGGTCTAGAAGCTTCCTTTGGGGCAGC  1019

seq1  GGAGGGCAGGGACAAAGATGCAGAAGATAGGCTTGTAATTAAAGCTTGGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGCAGGGACAAAGATGCAGAAGATAGGCTTGTAATTAAAGCTTGGA  1069

seq1  AAACCCATGACGTCCCTGGAAACTGGGGCTGAGAATTC  1138
      ||||||||||||||||||||||||||||||||||||||
seq2  AAACCCATGACGTCCCTGGAAACTGGGGCTGAGAATTC  1107

seq1: chr5_32535788_32536365
seq2: B6Ng01-131F21.g_68_645

seq1  GAATTCTTTCCTCCCACGTGGGACCTATACCTTGGGAAAGTGACATTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCTCCCACGTGGGACCTATACCTTGGGAAAGTGACATTAAA  50

seq1  AACAGAGATAGGTGTGGGGGTGTGATCTGGGAGGAGCTAATGGTCCCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGATAGGTGTGGGGGTGTGATCTGGGAGGAGCTAATGGTCCCTGC  100

seq1  GAAGGTGTTCTCGGGAATAATTATGAGTAGACAGGATGCTCATGTGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGTTCTCGGGAATAATTATGAGTAGACAGGATGCTCATGTGAAAA  150

seq1  GAGTTGCCCGTGGGTAGAGAGCTGAGCTGAGATGCTGAGGAACCTTGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGCCCGTGGGTAGAGAGCTGAGCTGAGATGCTGAGGAACCTTGCAT  200

seq1  AAGATTGTTAAGATTCCATCTTGCTTTAGATCCTTGAGTCCTCCATAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTGTTAAGATTCCATCTTGCTTTAGATCCTTGAGTCCTCCATAACC  250

seq1  AAGCCTTTGTGTGTGAGTACACTCATGCACTCATGAGTATGTGTGAGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTTGTGTGTGAGTACACTCATGCACTCATGAGTATGTGTGAGTAC  300

seq1  CAGCCCAGATATGGTCAGAGGATTCCTGCCTATCTGAGTTTGGAAGTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCAGATATGGTCAGAGGATTCCTGCCTATCTGAGTTTGGAAGTCTT  350

seq1  GGCATTATGGACATATGCTATCATATCTGGCTTGAAGATAGGTTTAGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTATGGACATATGCTATCATATCTGGCTTGAAGATAGGTTTAGGTT  400

seq1  CTGGGGACCTAAACCCAGGTCCTCACATTTATATAGTGAGCTTTTTACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGACCTAAACCCAGGTCCTCACATTTATATAGTGAGCTTTTTACCC  450

seq1  ACTGAACTATCTCTTGAAGCCAAGCCTTTACTTTTGTGGTCAGTTTCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACTATCTCTTGAAGCCAAGCCTTTACTTTTGTGGTCAGTTTCTCT  500

seq1  TTTCTCTGCTTTGTAGATCTTTGCTTCACAGCCAGGTAATGACACAATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGCTTTGTAGATCTTTGCTTCACAGCCAGGTAATGACACAATTG  550

seq1  TTCTTCAGGTAGGGGGTGTTGGTGGTGG  578
      ||||||||||||||||||||||||||||
seq2  TTCTTCAGGTAGGGGGTGTTGGTGGTGG  578