BAC Information

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BAC

Clone NameB6Ng01-131G11
Chromosome5 (Build37)
Map Location 70,602,256 - 70,701,506
singlet/doubletdoublet
Overlap genenone
Upstream geneKctd8, LOC545756, Yipf7, Guf1, Gnpda2
Downstream geneGabrg1, Gabra2, LOC635092
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131G11.bB6Ng01-131G11.g
ACCDH932468DH932469
length1,1091,074
definitionDH932468|Mus musculus domesticus DNA, BAC clone: B6Ng01-131G11, 5' end.DH932469|Mus musculus domesticus DNA, BAC clone: B6Ng01-131G11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,602,256 - 70,603,395)(70,700,432 - 70,701,506)
sequence
gaattctcctctgtgcacctctcagcatgcctggctttatttgggattca
gggttctgaaccttgtttttcatgagttcatggatagccctttaaccact
gaatcatctcagacccagaataaaagtatttaaatataccatttgagaat
gaaatgaaagaaaatttctcctaagcagtgtcctcagaagtttgcatagg
tgaatcccatcctttcccatgttttatacgctgtattcaaagtggtctag
tgcatgtttcctttgttctcctttttttcaatatatctactcattggata
tatcattgtctttatgatatcttacatattttcaatctttttcttcttct
tttttttttcatttttctgtatggcatagctctggtcaaataggtattta
atagtgcccctaataatcatggcatcatagcattctgagtaatgctcttg
acaaaaaaaaaaaaaatcttacagatatgtactaagtatgataaatattc
attataagtaccactggaaagcattttcaagacttttcctgaagtctttc
tttacctttcttatggtgaaaaccaataggctgcttagcctaaagttaac
attcctttttggaatagctacaggaagtactcttgttgcagttttctcta
caaacactagatcaaccactgagtaggttagctaattatcacatggacta
tatatatatgcttctccattttgattcagcaatagacctatggctatgtc
agcaatgttcagaaatactttcctaacttctttttccaaactgcttaatt
ttttcatttttcttctattgaaaaatatttttataaaacatattttgaat
agagttttccttccccaaacttctatggaattccccacacctttcctttc
atttgtatctatattctttctggctattttcccttggaaaatacagatat
ataagatcacattaaatatactaattttaaaaaacctgaatgagataaga
caaccaagaaagagcaagacaaacatgagattacatgcaaatttgaatgc
catgttcatagaattgatctctttaaccaaaactagagtctaatattaca
tggaggtgt
gaattcatttcaaaattggagcaactagtttgctgcttaaataaatttgg
gagaaaaaaaaaagattcctgagtgagtcattgctttgaccctataaact
aaattacagaggactcctgaattaaaacaagacagtgtggactgagatat
aattttttcaaaaaaataaaaagatgttctgccgatatgttgattctgta
atatatgttaggcctgtttaaaaaaattaagtagttaactatagcagttt
ggaggtcaagtaacagttctcaactgataatataaattccaaggccatta
gttcagatctagctttaattatcatttcgatggttaagtgaacacatgca
attacttaaccttggaatcccagtaccagctgaggtgactgactgcctga
acgagggcagtgaaatgacctgcagctgtgtgcaaagtcaaaatccatca
aagaggagcaaatgatcctacatgccctctgtcatccacagtaaagacag
aatgcttggccctgtagaagctattggtgattttccaaaaccatacagga
actgaaatggtacataaagcagctaactaaagtaatcttcatcatgcttc
taaggagaataaatggtctaataaaataaagtgacacattttgaggatta
tgtgggaggaaagggcagatactatattggttatttaactaatcctggga
ttaacaccaagaacaaagcaaagtttagtagaaagggtttacttgggttt
aagattccagaaggataggaattatcatggtaggaattatcatggtagga
agccacagaggcaggaagccatacaggttggaacataaaaacagacggct
tgcatctcctcacatcacatcctaaacaaagagcactctcagatggtgtg
aggctttgaaactcaaacctcactccaggatgtacctcctccaaaatgaa
acatctactctcagctctccaattgcacatcacctagggaccaggaatcc
aatgcgtaaggcttcgaagaacatctcatgcaaaccaccataaacaggct
gatattcttgccaaaaagagaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_70602256_70603395
seq2: B6Ng01-131G11.b_47_1155

seq1  GAATTCTCCTCTGTGCACCTCTCAGCATGCCTGGCTTTATTTGGGATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTCTGTGCACCTCTCAGCATGCCTGGCTTTATTTGGGATTCA  50

seq1  GGGTTCTGAACCTTGTTTTTCATGAGTTCATGGATAGCCCTTTAACCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTGAACCTTGTTTTTCATGAGTTCATGGATAGCCCTTTAACCACT  100

seq1  GAATCATCTCAGACCCAGAATAAAAGTATTTAAATATACCATTTGAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATCTCAGACCCAGAATAAAAGTATTTAAATATACCATTTGAGAAT  150

seq1  GAAATGAAAGAAAATTTCTCCTAAGCAGTGTCCTCAGAAGTTTGCATAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAAAGAAAATTTCTCCTAAGCAGTGTCCTCAGAAGTTTGCATAGG  200

seq1  TGAATCCCATCCTTTCCCATGTTTTATACGCTGTATTCAAAGTGGTCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCCCATCCTTTCCCATGTTTTATACGCTGTATTCAAAGTGGTCTAG  250

seq1  TGCATGTTTCCTTTGTTCTCCTTTTTTTCAATATATCTACTCATTGGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTTTCCTTTGTTCTCCTTTTTTTCAATATATCTACTCATTGGATA  300

seq1  TATCATTGTCTTTATGATATCTTACATATTTTCAATCTTTTTCTTCTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTGTCTTTATGATATCTTACATATTTTCAATCTTTTTCTTCTTCT  350

seq1  TTTTTTTTTCATTTTTCTGTATGGCATAGCTCTGGTCAAATAGGTATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCATTTTTCTGTATGGCATAGCTCTGGTCAAATAGGTATTTA  400

seq1  ATAGTGCCCCTAATAATCATGGCATCATAGCATTCTGAGTAATGCTCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGCCCCTAATAATCATGGCATCATAGCATTCTGAGTAATGCTCTTG  450

seq1  ACAAAAAAAAAAAAAATCTTACAGATATGTACTAAGTATGATAAATATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAAAAAAAAATCTTACAGATATGTACTAAGTATGATAAATATTC  500

seq1  ATTATAAGTACCACTGGAAAGCATTTTCAAGACTTTTCCTGAAGTCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAGTACCACTGGAAAGCATTTTCAAGACTTTTCCTGAAGTCTTTC  550

seq1  TTTACCTTTCTTATGGTGAAAACCAATAGGCTGCTTAGCCTAAAGTTAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTTTCTTATGGTGAAAACCAATAGGCTGCTTAGCCTAAAGTTAAC  600

seq1  ATTCCTTTTTGGAATAGCTACAGGAAGTACTCTTGTTGCAGTTTTCTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTTTGGAATAGCTACAGGAAGTACTCTTGTTGCAGTTTTCTCTA  650

seq1  CAAACACTAGATCAACCACTGAGTAGGTTAGCTAATTATCACATGGACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACTAGATCAACCACTGAGTAGGTTAGCTAATTATCACATGGACTA  700

seq1  TATATATATGCTTCTCCATTTTGATTCAGCAATAGACCTATGGCTATGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATGCTTCTCCATTTTGATTCAGCAATAGACCTATGGCTATGTC  750

seq1  AGCAATGTTCAGAAATACTTTCCTAACTTCTTTTTCCCAAACTGCTTAAT  800
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGCAATGTTCAGAAATACTTTCCTAACTTCTTTTT-CCAAACTGCTTAAT  799

seq1  TTTTTCATTTTTCTTCTATTGAAAAAATATTTTTATAAAACATATTTTGA  850
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTTTTCATTTTTCTTCTATTG-AAAAATATTTTTATAAAACATATTTTGA  848

seq1  ATAGAGTTTTCCTTCCCCAAACTTCTATGGAATTCCCCACACCTTTCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTTTTCCTTCCCCAAACTTCTATGGAATTCCCCACACCTTTCCTT  898

seq1  TCATTTGTATCTATATTCTTTCTGGCTATTTTTCCCTTGGAAAAATAACA  950
      |||||||||||||||||||||||||||| |||||||||||||||   |||
seq2  TCATTTGTATCTATATTCTTTCTGGCTA-TTTTCCCTTGGAAAA--TACA  945

seq1  GATATATAAAGAATCACAATAAAATATACTAAATTTTAAAAAAACCTGAA  1000
      |||||||||   ||||| || |||||||||||  ||| ||||||||||||
seq2  GATATATAA--GATCAC-ATTAAATATACTAA--TTTTAAAAAACCTGAA  990

seq1  TGAGATAAGACAAACCAAAGAAAAAGAGGCAAAGACAAAACATGAGATAT  1050
      |||||||||||||  | |||||| ||     ||||| ||||||||||| |
seq2  TGAGATAAGACAA--CCAAGAAAGAG----CAAGAC-AAACATGAGAT-T  1032

seq1  ACATGCAAATGTAGAGATGCACATGTTCATAGACATTGATCTTCTTATAA  1100
      |||||||||| | || |||| |||||||||||| ||||||| |||| |||
seq2  ACATGCAAAT-TTGA-ATGC-CATGTTCATAGA-ATTGATC-TCTT-TAA  1076

seq1  CACAAAACTAGAAGTCATAATATGTAAACAATGGAGGTGT  1140
      | ||||||||| |||| |||||| ||    ||||||||||
seq2  C-CAAAACTAG-AGTC-TAATAT-TA---CATGGAGGTGT  1109

seq1: chr5_70700432_70701506
seq2: B6Ng01-131G11.g_81_1140 (reverse)

seq1  TTTTCTACTTTTTTGGCATGATATATCACAGCCTGTTTATGGTGGTTTGC  50
      ||||||   ||||||||| || ||||  ||||||||||||||||||||||
seq2  TTTTCT--CTTTTTGGCAAGA-ATAT--CAGCCTGTTTATGGTGGTTTGC  45

seq1  ATGAGATGTTCTTCGTAGCCTTATGCATTTGAATTCCTGGTCCCTAGTTG  100
      ||||||||||||||| ||||||| ||| ||| ||||||||||||||| | 
seq2  ATGAGATGTTCTTCGAAGCCTTACGCA-TTGGATTCCTGGTCCCTAGGT-  93

seq1  GATGTGCAATTTGGAGAGCTTGAGAGGTAGATGTTTCATTTTGGAGGAGG  150
      ||||||||| ||||||||| ||||| ||||||||||||||||||||||||
seq2  GATGTGCAA-TTGGAGAGC-TGAGA-GTAGATGTTTCATTTTGGAGGAGG  140

seq1  TACATCCTGGAGCTGAGGTTTGAGGTTTCAAAGCCTCACACCATTCTGAG  200
      |||||||||||| |||||||||| ||||||||||||||||||| ||||||
seq2  TACATCCTGGAG-TGAGGTTTGA-GTTTCAAAGCCTCACACCA-TCTGAG  187

seq1  AGTGCTCTTTGTTTTAGGATGTGATGTGAGGAGATGCAAGCCGTCTGTTT  250
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTCTTTG-TTTAGGATGTGATGTGAGGAGATGCAAGCCGTCTGTTT  236

seq1  TTATGTTCCAACCTGTATGGCTTCCTGCCTCTGTGGCTTCCTACCATGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTCCAACCTGTATGGCTTCCTGCCTCTGTGGCTTCCTACCATGAT  286

seq1  AATTCCTACCATGATTAATTCCTATCCTTCTGGAATCTTAAACCCAAGTA  350
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AATTCCTACCATGA-TAATTCCTATCCTTCTGGAATCTTAAACCCAAGTA  335

seq1  AACCCTTTCTACTAAACTTTGCTTTGTTCTTGGTGTTAATCCCAGGATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTTCTACTAAACTTTGCTTTGTTCTTGGTGTTAATCCCAGGATTA  385

seq1  GTTAAATAACCAATATAGTATCTGCCCTTTCCTCCCACATAATCCTCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATAACCAATATAGTATCTGCCCTTTCCTCCCACATAATCCTCAAA  435

seq1  ATGTGTCACTTTATTTTATTAGACCATTTATTCTCCTTAGAAGCATGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCACTTTATTTTATTAGACCATTTATTCTCCTTAGAAGCATGATG  485

seq1  AAGATTACTTTAGTTAGCTGCTTTATGTACCATTTCAGTTCCTGTATGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTACTTTAGTTAGCTGCTTTATGTACCATTTCAGTTCCTGTATGGT  535

seq1  TTTGGAAAATCACCAATAGCTTCTACAGGGCCAAGCATTCTGTCTTTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAAATCACCAATAGCTTCTACAGGGCCAAGCATTCTGTCTTTACT  585

seq1  GTGGATGACAGAGGGCATGTAGGATCATTTGCTCCTCTTTGATGGATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGACAGAGGGCATGTAGGATCATTTGCTCCTCTTTGATGGATTTT  635

seq1  GACTTTGCACACAGCTGCAGGTCATTTCACTGCCCTCGTTCAGGCAGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTGCACACAGCTGCAGGTCATTTCACTGCCCTCGTTCAGGCAGTCA  685

seq1  GTCACCTCAGCTGGTACTGGGATTCCAAGGTTAAGTAATTGCATGTGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTCAGCTGGTACTGGGATTCCAAGGTTAAGTAATTGCATGTGTTC  735

seq1  ACTTAACCATCGAAATGATAATTAAAGCTAGATCTGAACTAATGGCCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACCATCGAAATGATAATTAAAGCTAGATCTGAACTAATGGCCTTG  785

seq1  GAATTTATATTATCAGTTGAGAACTGTTACTTGACCTCCAAACTGCTATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTATATTATCAGTTGAGAACTGTTACTTGACCTCCAAACTGCTATA  835

seq1  GTTAACTACTTAATTTTTTTAAACAGGCCTAACATATATTACAGAATCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACTACTTAATTTTTTTAAACAGGCCTAACATATATTACAGAATCAA  885

seq1  CATATCGGCAGAACATCTTTTTATTTTTTTGAAAAAATTATATCTCAGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCGGCAGAACATCTTTTTATTTTTTTGAAAAAATTATATCTCAGTC  935

seq1  CACACTGTCTTGTTTTAATTCAGGAGTCCTCTGTAATTTAGTTTATAGGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGTCTTGTTTTAATTCAGGAGTCCTCTGTAATTTAGTTTATAGGG  985

seq1  TCAAAGCAATGACTCACTCAGGAATCTTTTTTTTTTCTCCCAAATTTATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCAATGACTCACTCAGGAATCTTTTTTTTTTCTCCCAAATTTATT  1035

seq1  TAAGCAGCAAACTAGTTGCTCCAAT  1075
      |||||||||||||||||||||||||
seq2  TAAGCAGCAAACTAGTTGCTCCAAT  1060