BAC Information

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BAC

Clone NameB6Ng01-131H12
Chromosome5 (Build37)
Map Location 7,649,245 - 7,650,399
singlet/doubletsinglet
Overlap genenone
Upstream geneEG435830, LOC100042651, 4921511H03Rik, LOC242823
Downstream geneLOC667767, EG546855, Steap4, Sri, LOC433840, Adam22, Dbf4, Slc25a40, Gm440
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131H12.bB6Ng01-131H12.g
ACCDH932518DH932519
length1,1621,143
definitionDH932518|Mus musculus domesticus DNA, BAC clone: B6Ng01-131H12, 5' end.DH932519|Mus musculus domesticus DNA, BAC clone: B6Ng01-131H12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaacacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcctt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggcttttttttggttgggagactattaataactgcttctatttc
tttaggtgatatgggactgtttagatggtcaacttgatcctgattcaact
ttggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcc
agttttgttgagtatagccttttgtagaaggatctgatggtgttttggat
ttcttcaggatctgttgttatgtctcccttttcatttctgattttgttaa
ttaggattttgtccctgtgccctttagtgagtctagctaagggtttatct
atcttgttgattttctcaaagaaccaactcctcgtttggttaattctttg
aatagttcttctgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttccttttttttctagg
gcatttagatgtgtgtcaagctgctagtatgtgctgtctcctgttctcta
ggaagcactcagagctatgagtttcctctagaaatgctttcatggtccat
aggttgggtacgtggtggctcattcataactctaaaaggcttaattcttc
ttatcctcttgaccaaggttcattgaaagagggtatccgttcacccgaag
ttggctttccctatatgtgttggaaatcgtctaggcccgggggtcgagga
gcctgggcactc
gaattccagggtaaaaaaaattatctccctccatcacatacttgatttca
atttgtgattttgtactttgtctcatcaatgcagctgctgaagtaacaca
aagtagtggaggaaagcaggaggttaaacacaagtcggagcaagaggagc
agagagaaagcccagtattattgagccctgcagtaaatggcatgttagaa
agaactgagagtcagccatgctgctgccttgcccactcaccagccttgtt
tttgcttactatttaaatagcataaagtagctatatacacatgctgccaa
agataaaaccgagcctccttgataaagatctgtttacattattttcagct
gttatgtttagaaatgtaaagatggtatgccaacaatatacactcattca
ctaatttatgcaggataagcaacaagcaacagcaattcagtttatcaacc
aagtatgcatctccccgaggaagggaacagaaacacagcaaagtgatgaa
tcatttgcatttatttggaaagttatgctaaactgtctatgattattttc
agtaggaatgaccccaataagtatactgttgtggatgcttgaattcaggc
tacgggatcataacagaggttagactatgtgggaattaatacagtggtgg
ccttgaaatactaggtttagaatagctataggtaggtaactcttgactcc
aaacaagtttagacttagggagcatgagaatttatagacatttgcccact
gatttattcatttgttaagtatgtatgaattcttcctgaataatctactg
aatatttagagaaaaggaccaataaatcttgacctgtttcaaatttactt
caggataaagaaaatgaaaattatgatattgtatagtagaggaaaataga
agagatctgaaagaatagaagcaggcacccaccgaagctcacaaggacac
tgaagcctgttgatgcacagacaaaaaagacttcacacaaaaagaaacta
cttctttaggtgttttgattggtggaaaattcattaaatctggcagtgct
ccgtgaatagctaattgtataaagaaccaaaggactgattaaaggcttgg
cactgacaaaggtgacacacaaactcttgtttagtgcttgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_7649245_7650399
seq2: B6Ng01-131H12.g_70_1212

seq1  GAATTCCAGGGTAAAAAAAATTATCTCCCTCCATCACATACTTGATTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGTAAAAAAAATTATCTCCCTCCATCACATACTTGATTTCA  50

seq1  ATTTGTGATTTTGTACTTTGTCTCATCAATGCAGCTGCTGAAGTAACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGATTTTGTACTTTGTCTCATCAATGCAGCTGCTGAAGTAACACA  100

seq1  AAGTAGTGGAGGAAAGCAGGAGGTTAAACACAAGTCGGAGCAAGAGGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGTGGAGGAAAGCAGGAGGTTAAACACAAGTCGGAGCAAGAGGAGC  150

seq1  AGAGAGAAAGCCCAGTATTATTGAGCCCTGCAGTAAATGGCATGTTAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAAAGCCCAGTATTATTGAGCCCTGCAGTAAATGGCATGTTAGAA  200

seq1  AGAACTGAGAGTCAGCCATGCTGCTGCCTTGCCCACTCACCAGCCTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGAGAGTCAGCCATGCTGCTGCCTTGCCCACTCACCAGCCTTGTT  250

seq1  TTTGCTTACTATTTAAATAGCATAAAGTAGCTATATACACATGCTGCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTACTATTTAAATAGCATAAAGTAGCTATATACACATGCTGCCAA  300

seq1  AGATAAAACCGAGCCTCCTTGATAAAGATCTGTTTACATTATTTTCAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAACCGAGCCTCCTTGATAAAGATCTGTTTACATTATTTTCAGCT  350

seq1  GTTATGTTTAGAAATGTAAAGATGGTATGCCAACAATATACACTCATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTTTAGAAATGTAAAGATGGTATGCCAACAATATACACTCATTCA  400

seq1  CTAATTTATGCAGGATAAGCAACAAGCAACAGCAATTCAGTTTATCAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTATGCAGGATAAGCAACAAGCAACAGCAATTCAGTTTATCAACC  450

seq1  AAGTATGCATCTCCCCGAGGAAGGGAACAGAAACACAGCAAAGTGATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATGCATCTCCCCGAGGAAGGGAACAGAAACACAGCAAAGTGATGAA  500

seq1  TCATTTGCATTTATTTGGAAAGTTATGCTAAACTGTCTATGATTATTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGCATTTATTTGGAAAGTTATGCTAAACTGTCTATGATTATTTTC  550

seq1  AGTAGGAATGACCCCAATAAGTATACTGTTGTGGATGCTTGAATTCAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGAATGACCCCAATAAGTATACTGTTGTGGATGCTTGAATTCAGGC  600

seq1  TACGGGATCATAACAGAGGTTAGACTATGTGGGAATTAATACAGTGGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGGATCATAACAGAGGTTAGACTATGTGGGAATTAATACAGTGGTGG  650

seq1  CCTTGAAATACTAGGTTTAGAATAGCTATAGGTAGGTAACTCTTGACTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAAATACTAGGTTTAGAATAGCTATAGGTAGGTAACTCTTGACTCC  700

seq1  AAACAAGTTTAGACTTAGGGAGCATGAGAATTTATAGACATTTGCCCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGTTTAGACTTAGGGAGCATGAGAATTTATAGACATTTGCCCACT  750

seq1  GATTTATTCATTTGTTAAGTATGTATGAATTCTTCCTGAATAATCTACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATTCATTTGTTAAGTATGTATGAATTCTTCCTGAATAATCTACTG  800

seq1  AATATTTAGAGAAAAGGACCAATAAATCTTGACCTGTTTCAAATTTACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTAGAGAAAAGGACCAATAAATCTTGACCTGTTTCAAATTTACTT  850

seq1  CAGGATAAAGAAAATGAAAATTATGATATTGTATAGTAGAGGAAAAATAG  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CAGGATAAAGAAAATGAAAATTATGATATTGTATAGTAGAGG-AAAATAG  899

seq1  AAGAGATCTGAAAGAATAGAAGCAGGCACCCACCGAAGCCTCACAAAGGA  950
      |||||||||||||||||||||||||||||||||||||| ||||| |||||
seq2  AAGAGATCTGAAAGAATAGAAGCAGGCACCCACCGAAG-CTCAC-AAGGA  947

seq1  CACTGAAAGCCTGTTGATGCACAGACAAAAAAAGACTTCACACAAAAAGA  1000
      ||||| |||||||||||||||||||| |||||||||||||||||||||| 
seq2  CACTG-AAGCCTGTTGATGCACAGAC-AAAAAAGACTTCACACAAAAAG-  994

seq1  AAACTAACTTCTTTATGTGTTTTGTATTGTTGGAAAATATCATTAAAATC  1050
      ||||| ||||||||| |||||||| |||| |||||||| ||||| |||||
seq2  AAACT-ACTTCTTTAGGTGTTTTG-ATTGGTGGAAAAT-TCATT-AAATC  1040

seq1  TTGGCAGTGCTACAGTGAATAGCTAATTGTATAAAGAACAAAAGAACTGA  1100
       |||||||||| | ||||||||||||||||||||||||| |||| |||||
seq2  -TGGCAGTGCT-CCGTGAATAGCTAATTGTATAAAGAACCAAAGGACTGA  1088

seq1  TTAAATGCATGGCACTGACAAA-GTGACACACAAAATCCTAGTTTAGTGC  1149
      ||||| || ||||||||||||| |||||||||||| | || |||||||||
seq2  TTAAAGGCTTGGCACTGACAAAGGTGACACACAAACT-CTTGTTTAGTGC  1137

seq1  ATGTCA  1155
       |||||
seq2  TTGTCA  1143