BAC Information

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BAC

Clone NameB6Ng01-131K03
Chromosome5 (Build37)
Map Location 15,155,929 - 15,156,940
singlet/doubletsinglet
Overlap genenone
Upstream geneSema3e, Pclo, ENSMUSG00000033219, LOC624245, Speer8-ps1, Speer4c, Speer4d
Downstream gene4930572O03Rik, Speer7-ps1, 4930519H02Rik, LOC100041781, Cacna2d1, LOC668121, Hgf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131K03.bB6Ng01-131K03.g
ACCDH932640DH932641
length1,0081,246
definitionDH932640|Mus musculus domesticus DNA, BAC clone: B6Ng01-131K03, 5' end.DH932641|Mus musculus domesticus DNA, BAC clone: B6Ng01-131K03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcatttattccctgacggcaaatcctacctatctctccatgag
atgaggctttgtctcacattaagaactgcagaatgcaatacatcaaaacc
ttgttgatctccatggtggtgatgcacaccacagcctcacggtgaacatc
tacactggcaggtttcagggtatgttgaagtagtccaccatgtcagtgta
acctgcaaagtgccatgagacaatactaatagaaatctgcaggattcctc
cacattagatttcactatggtcttcaatgtcattttgtaaagaaatacta
tgggttcacagatacacacacacacacaaacatgaagaccagaggacttt
aagggaggattgttctctctactatgtgcattccaaggaaaaaattctgg
tttctaggcttgacagcaatgatgaatacctgctcaaccatgtcattaac
tcatcaactaatcatctaaaccaagccatttcataagctctatatttgta
tttatgtttccttactctctctgtctctctgtttctctgtctgtctctct
ctttctgtctctctgtctctgtctctgtctctgtctctgtctctctctct
ctctctctctctctctctctctcgtgtgtgtgtctgtgtgtgtgtctgtg
tttgtgtgtgtgtctcccgagaggctctgccagtgcaaatacaaatacag
aggtggatgctctcagtcagccattagattaaacacaatgccccagtgga
ggagctagaaaaacgacccaaggagctgacattgtttgcagccccataga
aggaacagcaatatgattagccagtacccccagagctcccagaaactaca
ccaccaactagagtacagtggaactcatggctccagctgcatatgtagta
gatgatggctttgttgttcatcaatgggaggaaaggccttgaccctgtgt
aggggaatgcccagctagaagccagagtggaatggttggtgagcagggga
caggggag

gaattctacatctgtatctgtaggccacaggaagagacagtgagccacta
gacctggcttgagcttttcaaagctcctcctaggtgactcatttcctcca
acaaggccacaccttctccaacgaggtcacacttcctaatagttccactt
cttgtgagcctatcagggtcattttctttcaaactatcaccacacctatt
cacaattgaatactaaagaaaattgaaatgatgcaatataagtggataga
actggaatatactatcctaagtgaggtaatctcagtacagaaacacaaat
gccacatgttcccttttatttgtggatcttagctttgaatctttagatgt
gattatataacctgaagtaacaacaacaacaaaacaacaacaacaacaac
aacaaagtcaggaaaatagaaagagaccatgggaaggaggcgctaaagag
agggcatagtagaatacagttgctttgaaatggataatggagatttgtac
tagatttgtactagggagggtgaagtagagttaaataacactaagggact
ttaagaagacacagggacacatcattttacaagcttacttaaaatataca
atgtatatgtatgtgttcatacttcatacacttatgtgtgtacattcttt
tcttttctttctttttttttcaacagttacttcacttaaggtgatggtat
accccacctctaagaaccatgctctatctaacaaaaaccacagggccagg
catggggaacacccccttgagctattgatcagagataaacaagaatctct
ctctcttttttttttttttttaaagaagagcttggacaaaggcttgtttt
atttaatgagtgatccatgtgagccacagccaggccactatgaacagact
tgaggttaaatgttatttcttggtctcttcctccttggaaaggcttttca
ttcttgccctggaggcactcttcccttgcgcttctgtgcttcctttgtct
tagacctgcttacctcaacacagtcagctggtagctcttgcagcctgctg
cctcagcttggggaaatggcccagacatctgcttgttgatacctccattg
acctccaggacaggctgggtatcatggggtcatctcttctgaattccaat
atcctggaaagatctgtatgatgacaaccttgcatctgactatgacgatt
tgatgtgtcaattcttgttcattgggtcgagcaactcttttccgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_15155929_15156940
seq2: B6Ng01-131K03.b_44_1051

seq1  GAATTCAGCATTTATTCCCTGACGGCAAATCCTACCTATCTCTCCATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATTTATTCCCTGACGGCAAATCCTACCTATCTCTCCATGAG  50

seq1  ATGAGGCTTTGTCTCACATTAAGAACTGCAGAATGCAATACATCAAAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCTTTGTCTCACATTAAGAACTGCAGAATGCAATACATCAAAACC  100

seq1  TTGTTGATCTCCATGGTGGTGATGCACACCACAGCCTCACGGTGAACATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGATCTCCATGGTGGTGATGCACACCACAGCCTCACGGTGAACATC  150

seq1  TACACTGGCAGGTTTCAGGGTATGTTGAAGTAGTCCACCATGTCAGTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGGCAGGTTTCAGGGTATGTTGAAGTAGTCCACCATGTCAGTGTA  200

seq1  ACCTGCAAAGTGCCATGAGACAATACTAATAGAAATCTGCAGGATTCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCAAAGTGCCATGAGACAATACTAATAGAAATCTGCAGGATTCCTC  250

seq1  CACATTAGATTTCACTATGGTCTTCAATGTCATTTTGTAAAGAAATACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTAGATTTCACTATGGTCTTCAATGTCATTTTGTAAAGAAATACTA  300

seq1  TGGGTTCACAGATACACACACACACACAAACATGAAGACCAGAGGACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCACAGATACACACACACACACAAACATGAAGACCAGAGGACTTT  350

seq1  AAGGGAGGATTGTTCTCTCTACTATGTGCATTCCAAGGAAAAAATTCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGGATTGTTCTCTCTACTATGTGCATTCCAAGGAAAAAATTCTGG  400

seq1  TTTCTAGGCTTGACAGCAATGATGAATACCTGCTCAACCATGTCATTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGGCTTGACAGCAATGATGAATACCTGCTCAACCATGTCATTAAC  450

seq1  TCATCAACTAATCATCTAAACCAAGCCATTTCATAAGCTCTATATTTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAACTAATCATCTAAACCAAGCCATTTCATAAGCTCTATATTTGTA  500

seq1  TTTATGTTTCCTTACTCTCTCTGTCTCTCTGTTTCTCTGTCTGTCTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTTCCTTACTCTCTCTGTCTCTCTGTTTCTCTGTCTGTCTCTCT  550

seq1  CTTTCTGTCTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTCTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTCTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTCTCTCT  600

seq1  CTCTCTCTCTCTCTCTCTCTCTCGTGTGTGTGTCTGTGTGTGTGTCTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCGTGTGTGTGTCTGTGTGTGTGTCTGTG  650

seq1  TTTGTGTGTGTGTCTCCCGAGAGGCTCTGCCAGTGCAAATACAAATACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTGTGTGTCTCCCGAGAGGCTCTGCCAGTGCAAATACAAATACAG  700

seq1  AGGTGGATGCTCTCAGTCAGCCATTAGATTAAACACAATGCCCCAGTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGATGCTCTCAGTCAGCCATTAGATTAAACACAATGCCCCAGTGGA  750

seq1  GGAGCTAGAAAAACGACCCAAGGAGCTGACATTGTTTGCAGCCCCATAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTAGAAAAACGACCCAAGGAGCTGACATTGTTTGCAGCCCCATAGA  800

seq1  AGGAACAGCAATATGAATTAGCCAGTACCCCCAGAGCTCCCAGAAACTAC  850
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGGAACAGCAATATG-ATTAGCCAGTACCCCCAGAGCTCCCAGAAACTAC  849

seq1  ACCACCAACTAGAGTACAGTGGAACTCATGGCTCCAGCTGCATATGTAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCAACTAGAGTACAGTGGAACTCATGGCTCCAGCTGCATATGTAGT  899

seq1  AGATGATGGCTTTGTTGTTCATCAATGGGAGGAAAGGCCTTGACCCTGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATGGCTTTGTTGTTCATCAATGGGAGGAAAGGCCTTGACCCTGTG  949

seq1  TAGGGGAATGCCCAGGCTAGGAAGCCAGAGTGGAATGGTTGGTGAGCAGG  1000
      |||||||||||||| |||| |||||||||||||||||||||||||||| |
seq2  TAGGGGAATGCCCA-GCTA-GAAGCCAGAGTGGAATGGTTGGTGAGCA-G  996

seq1  GGGACAGGGGAG  1012
      ||||||||||||
seq2  GGGACAGGGGAG  1008


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