BAC Information

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BAC

Clone NameB6Ng01-136D24
Chromosome5 (Build37)
Map Location 84,119,984 - 84,121,130
singlet/doubletsinglet
Overlap geneLOC100039608
Upstream geneLOC100039434, Srd5a2l2
Downstream geneLOC231368, Epha5, LOC100039489
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136D24.bB6Ng01-136D24.g
ACCDH936074DH936075
length1,2481,135
definitionDH936074|Mus musculus domesticus DNA, BAC clone: B6Ng01-136D24, 5' end.DH936075|Mus musculus domesticus DNA, BAC clone: B6Ng01-136D24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtgtcttgcgactcaagtatgagagttttcccatcaagttc
tagaggctaaccccaagcagtggcaacttctgctaatgtttggggtggag
ttctataggattctacagaccaacattttgaaaataaataacctatctta
tcagggaaaagcatggttcagagtaataacatttgtagttattttctata
tgcatatagttttaaaaccttctataataataatgttccatatgactttt
caaaggcctttactgcctattattcttgccaatatttcttcttataccct
gcccccctatctctctccccacttaaaccttttttggattcattgttatc
ttcacaacactaattttcaatccttgaacacttacttggtcctcagttga
tgacatgacatgtgggtgtgtagctggtacagatgaaggcttgctggagg
aaggttgtgaaaagccatatctaccactggctcttcctctgtttacagtt
caagatgtgagacctcaacttcttgtttttgccactatgcctgacaattc
tcattcttctgctctgtcctcatggactcctatccctctggaagcttcag
cattaaatatcctctttttttatgcatttatttgagtgctgtgttttatc
acaacagaaaagaaaacaatatagcatttaagtgcaaacacttgttagag
ggcatgtccgctgtgagtcttttgttaattcccatctactgcaaggtaag
catctttgatgggagtagagtgtgattctctgatctatggctatagcaat
ttgtcattaggagtcatttttattgctatattcctttagcagaataatag
taggttttcccctaggcccatcaagttcttggtcactttagcactgtcat
atgtagatcccttttcaaggaaagtgatttatgtttgtcttttggggttt
tgattacctcatttagaatggttatttccaatttcatgttcattttattt
acatctgaataatattcaatatgtatacacacactaaatgtcattactaa
tcatcttttaatggtcatctaggctgtttctacttctgatactgttgact
agggcatcggtaacatgtgaataagaacacctacagctgaacgtgaatcc
ttgccatggtaacaagtaattgtatagcaggtcatgtgacaattggttta
tcacctctcaggagaagtacttctctacagtctcccaggagatatctg
gaattccccaaaatgagactagtgtccccacagcaattctatagagctca
ctctcttctcatgtcctgaaagatgcctacttttaaacaattgtattaat
ttacatatttattcattaacttgtcatttttaagctatcattcaacctat
aatatttcagtgcatggactttgcatggtttctttagttaaatattgaaa
ccaattatttctgtcccttcctttctttaataataataataataataata
ataatattaataactgtctttttcttttttaacatttatatgcattacaa
cttatagtaaagttatattattagtttctaaacagtacaaaatttaaatt
atattacttctttatttctaaacttcagattgatacccaatacttataaa
cactatctgttccagatgctttctaagatttgccaggtcaatgttggctt
ctaaaaccacatatttcatctctagtagcccagccatttatgtatgaaat
cgtcaggtctccatactcagaaaaacctcacgtttgatttgatgaactgt
caattctgtgtcaactttcttactaatttttaacaaaggcatatcatttc
tttgagctatcaaatatttcagttttaattagagctaatcctacctgact
ggatttcttttattaatctctttattcagtgtttcttgttccagatttaa
agggcagtttagtgtcaactccaagtttctatttattctcatctctctgt
aagcaaacacttagagtaatcaggaaatcacagcataaaacattgacaat
gatataggacactaacagaataatcataatcttctttattcttttttgtt
cttgttgttaaaacaataagcatccaaaattcattacaattgctctatag
tcacactcataataatatttatgaaatcttaaaatgtttctatgttaacg
catgtcatataaacattcctgagtccttgatttgcataatacacaccttc
tctattcagatttctattatatacagtatacctctaaggtatttggatgt
agtgttcattggatcatatccatttactatgactaatatagtaatgttat
ttttatggagaatcattttattagcatcatatatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_84119984_84121130
seq2: B6Ng01-136D24.g_66_1200

seq1  GAATTCCCCAAAATGAGACTAGTGTCCCCACAGCAATTCTATAGAGCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCAAAATGAGACTAGTGTCCCCACAGCAATTCTATAGAGCTCA  50

seq1  CTCTCTTCTCATGTCCTGAAAGATGCCTACTTTTAAACAATTGTATTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTCTCATGTCCTGAAAGATGCCTACTTTTAAACAATTGTATTAAT  100

seq1  TTACATATTTATTCATTAACTTGTCATTTTTAAGCTATCATTCAACCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATATTTATTCATTAACTTGTCATTTTTAAGCTATCATTCAACCTAT  150

seq1  AATATTTCAGTGCATGGACTTTGCATGGTTTCTTTAGTTAAATATTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTCAGTGCATGGACTTTGCATGGTTTCTTTAGTTAAATATTGAAA  200

seq1  CCAATTATTTCTGTCCCTTCCTTTCTTTAATAATAATAATAATAATAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTATTTCTGTCCCTTCCTTTCTTTAATAATAATAATAATAATAATA  250

seq1  ATAATATTAATAACTGTCTTTTTCTTTTTTAACATTTATATGCATTACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTAATAACTGTCTTTTTCTTTTTTAACATTTATATGCATTACAA  300

seq1  CTTATAGTAAAGTTATATTATTAGTTTCTAAACAGTACAAAATTTAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGTAAAGTTATATTATTAGTTTCTAAACAGTACAAAATTTAAATT  350

seq1  ATATTACTTCTTTATTTCTAAACTTCAGATTGATACCCAATACTTATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACTTCTTTATTTCTAAACTTCAGATTGATACCCAATACTTATAAA  400

seq1  CACTATCTGTTCCAGATGCTTTCTAAGATTTGCCAGGTCAATGTTGGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATCTGTTCCAGATGCTTTCTAAGATTTGCCAGGTCAATGTTGGCTT  450

seq1  CTAAAACCACATATTTCATCTCTAGTAGCCCAGCCATTTATGTATGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACCACATATTTCATCTCTAGTAGCCCAGCCATTTATGTATGAAAT  500

seq1  CGTCAGGTCTCCATACTCAGAAAAACCTCACGTTTGATTTGATGAACTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCAGGTCTCCATACTCAGAAAAACCTCACGTTTGATTTGATGAACTGT  550

seq1  CAATTCTGTGTCAACTTTCTTACTAATTTTTAACAAAGGCATATCATTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTGTGTCAACTTTCTTACTAATTTTTAACAAAGGCATATCATTTC  600

seq1  TTTGAGCTATCAAATATTTCAGTTTTAATTAGAGCTAATCCTACCTGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGCTATCAAATATTTCAGTTTTAATTAGAGCTAATCCTACCTGACT  650

seq1  GGATTTCTTTTATTAATCTCTTTATTCAGTGTTTCTTGTTCCAGATTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCTTTTATTAATCTCTTTATTCAGTGTTTCTTGTTCCAGATTTAA  700

seq1  AGGGCAGTTTAGTGTCAACTCCAAGTTTCTATTTATTCTCATCTCTCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGTTTAGTGTCAACTCCAAGTTTCTATTTATTCTCATCTCTCTGT  750

seq1  AAGCAAACACTTAGAGTAATCAGGAAATCACAGCATAAAACATTGACAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAACACTTAGAGTAATCAGGAAATCACAGCATAAAACATTGACAAT  800

seq1  GATATAGGACACTAACAGAATAATCATAATCTTCTTTATTCTTTTTTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGGACACTAACAGAATAATCATAATCTTCTTTATTCTTTTTTGTT  850

seq1  CTTGTTGTTAAAACAAATAAGCATCCAAAATTCATTACAATTGCTCTATA  900
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTTGTTGTTAAAAC-AATAAGCATCCAAAATTCATTACAATTGCTCTATA  899

seq1  GTCACACTCATAATAATATTTATGAAATCTTAAAATGTTTCTATGTTAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACACTCATAATAATATTTATGAAATCTTAAAATGTTTCTATGTTAAC  949

seq1  GCATGTCATATAAACATTCCTGAGTCCTTGATTTTGCATAATACACACCT  1000
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GCATGTCATATAAACATTCCTGAGTCCTTGA-TTTGCATAATACACACCT  998

seq1  TCTCTATTCAAGATTTTCTAATTATAATACAAGTATA-CTCTAAGGTATT  1049
      ||||||||| ||| ||||| ||||| |||| |||||| ||||||||||||
seq2  TCTCTATTC-AGA-TTTCT-ATTAT-ATAC-AGTATACCTCTAAGGTATT  1043

seq1  TGAATGTAGTGTTTCAATTGAATCATATCAATTTACTATGACTTAATATA  1099
      || ||||||||||   |||| |||||||| |||||||||||| |||||||
seq2  TGGATGTAGTGTT--CATTGGATCATATCCATTTACTATGAC-TAATATA  1090

seq1  GTTAAATGTTTATTTTTATTGAGAATCATTTTATTAGCATCATATATC  1147
      ||  |||| |||||||||| ||||||||||||||||||||||||||||
seq2  GT--AATG-TTATTTTTATGGAGAATCATTTTATTAGCATCATATATC  1135