BAC Information

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BAC

Clone NameB6Ng01-136F21
Chromosome5 (Build37)
Map Location 90,182,316 - 90,347,808
singlet/doubletdoublet
Overlap geneAdamts3
Upstream geneMobkl1a, Dck, Mkrn1-ps1, Slc4a4, Gc, LOC622870, Npffr2, LOC631105
Downstream geneEG665733, Cox18, Ankrd17, Alb1, Afp, Afm, LOC100040105, LOC622307, Rassf6, Cxcl5, Ppbp, Cxcl4, Gm1960, Cxcl15, Cxcl1, Cxcl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136F21.bB6Ng01-136F21.g
ACCDH936156DH936157
length1,153189
definitionDH936156|Mus musculus domesticus DNA, BAC clone: B6Ng01-136F21, 5' end.DH936157|Mus musculus domesticus DNA, BAC clone: B6Ng01-136F21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,182,316 - 90,183,477)(90,347,620 - 90,347,808)
sequence
gaattctcttaggcagataaataggtaaatttaaaaatctgctaaaagtt
atagaccagatctgtcacgtagaaactagtcatcaaagtctcttgtagca
ttcattattcatagcttagacaaaaatgaggtcaagtcaatcacagtgct
caggggtaatcatttatgatagtgaaaagagcaattaatttctatatata
aatattagatacacgttctacatatactaattacttattctacaatttga
gaaaatccattagatacccagttcaatttccacatgtaaaaatgataatt
gtagtaataatacaaattattgaaaatttcaaaagattaaatggacaaaa
taaagcagttataagtgcaatattatgttattagaataagttatatgtta
tcactataagtgccaatatcacttgcttgtcttaattaatggataaccat
tactttcccatgataacttgaatgtcccatttcaggatattcacatgtat
tctgtaccaaggaggatgaaaattaaaaacagagaaatttttcaaagaaa
cagcaataattcatgaggacttctagtctctaccagtcaagaggtatgga
tataattctcacctgaatgttatgttcaagagctactcagatatattcta
tggatatttacagtatccttaaggatatactaaaatgaatattgtatgga
agaagttatctgaactgtcaaacttccaaacgtttcctgaccatgtcata
atagctactgtggaagaaaaggattaacggaagctactggagcatccccc
actgaacagtgaactttatgattgcctgtactagtattgaatctcatgga
gaaaagacagactggaaacgccaaaaggactcaaggtgttcagattcccc
ctttgcactctccacttggaccactctaaaaggcagtgggctttgcagag
tgacagcaagtttagagagtataaagctgtgataacaatgccctgcagtc
tgggtagttcattatgacatcaatcagtgtgctttgtttcacttcagaca
tgttttcctttggaaaggtggggttttattctttttgttctaaattaaac
ctatgggtgtgtcacaattgtgtggtgtgtatgtgatggtgtttagaaga
gaa
agtcacgtgacatcacccctggcttcaaacttcctttctcagattcgtgc
atgccacagctatagaatttctcttgtatttctggtttgcatacattcct
cagatgtccaatagtacatattctgaagcagtaatttgtttcccagttat
gcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_90182316_90183477
seq2: B6Ng01-136F21.b_45_1197

seq1  GAATTCTCTTAGGCAGATAAATAGGTAAATTTAAAAATCTGCTAAAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAGGCAGATAAATAGGTAAATTTAAAAATCTGCTAAAAGTT  50

seq1  ATAGACCAGATCTGTCACGTAGAAACTAGTCATCAAAGTCTCTTGTAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACCAGATCTGTCACGTAGAAACTAGTCATCAAAGTCTCTTGTAGCA  100

seq1  TTCATTATTCATAGCTTAGACAAAAATGAGGTCAAGTCAATCACAGTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTATTCATAGCTTAGACAAAAATGAGGTCAAGTCAATCACAGTGCT  150

seq1  CAGGGGTAATCATTTATGATAGTGAAAAGAGCAATTAATTTCTATATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGTAATCATTTATGATAGTGAAAAGAGCAATTAATTTCTATATATA  200

seq1  AATATTAGATACACGTTCTACATATACTAATTACTTATTCTACAATTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAGATACACGTTCTACATATACTAATTACTTATTCTACAATTTGA  250

seq1  GAAAATCCATTAGATACCCAGTTCAATTTCCACATGTAAAAATGATAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCCATTAGATACCCAGTTCAATTTCCACATGTAAAAATGATAATT  300

seq1  GTAGTAATAATACAAATTATTGAAAATTTCAAAAGATTAAATGGACAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAATAATACAAATTATTGAAAATTTCAAAAGATTAAATGGACAAAA  350

seq1  TAAAGCAGTTATAAGTGCAATATTATGTTATTAGAATAAGTTATATGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAGTTATAAGTGCAATATTATGTTATTAGAATAAGTTATATGTTA  400

seq1  TCACTATAAGTGCCAATATCACTTGCTTGTCTTAATTAATGGATAACCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATAAGTGCCAATATCACTTGCTTGTCTTAATTAATGGATAACCAT  450

seq1  TACTTTCCCATGATAACTTGAATGTCCCATTTCAGGATATTCACATGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCCCATGATAACTTGAATGTCCCATTTCAGGATATTCACATGTAT  500

seq1  TCTGTACCAAGGAGGATGAAAATTAAAAACAGAGAAATTTTTCAAAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTACCAAGGAGGATGAAAATTAAAAACAGAGAAATTTTTCAAAGAAA  550

seq1  CAGCAATAATTCATGAGGACTTCTAGTCTCTACCAGTCAAGAGGTATGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATAATTCATGAGGACTTCTAGTCTCTACCAGTCAAGAGGTATGGA  600

seq1  TATAATTCTCACCTGAATGTTATGTTCAAGAGCTACTCAGATATATTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTCTCACCTGAATGTTATGTTCAAGAGCTACTCAGATATATTCTA  650

seq1  TGGATATTTACAGTATCCTTAAGGATATACTAAAATGAATATTGTATGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATTTACAGTATCCTTAAGGATATACTAAAATGAATATTGTATGGA  700

seq1  AGAAGTTATCTGAACTGTCAAACTTCCAAACGTTTCCTGACCATGTCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTATCTGAACTGTCAAACTTCCAAACGTTTCCTGACCATGTCATA  750

seq1  ATAGCTACTGTGGAAGAAAAGGATTAACGGAAGCTACTGGAGCATCCCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTACTGTGGAAGAAAAGGATTAACGGAAGCTACTGGAGCATCCCCC  800

seq1  ACTGAACAGTGAACTTTATGATTGCCTGTACTAGTATTGAATCTCATGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACAGTGAACTTTATGATTGCCTGTACTAGTATTGAATCTCATGGA  850

seq1  GAAAAGACAGACTGGAAACGCCAAAAGGACTCAAGGTGTTCAGATTCCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGACAGACTGGAAACGCCAAAAGGACTCAAGGTGTTCAGATTCCCC  900

seq1  CTTTGCACTCTCCACCTTGGACCACTCTAAAAGGCAGGTGGGCTTTGCAG  950
      |||||||||||||| ||||||||||||||||||||| |||||||||||||
seq2  CTTTGCACTCTCCA-CTTGGACCACTCTAAAAGGCA-GTGGGCTTTGCAG  948

seq1  AGTGACAGCAAGTTTTAGAAGAGTATAAAGCTGTGATAACAATGCCCTGC  1000
      |||||||||||| ||||| |||||||||||||||||||||||||||||||
seq2  AGTGACAGCAAG-TTTAG-AGAGTATAAAGCTGTGATAACAATGCCCTGC  996

seq1  AGTTCTGGGTAGTTCATTTATGACATCAATCAGTGTGCTTTGTTTCACTT  1050
      || ||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AG-TCTGGGTAGTTCA-TTATGACATCAATCAGTGTGCTTTGTTTCACTT  1044

seq1  CAGACAATGTTTTCCTTTGAAAAGGTGGGGTTTTTATTCTTTTTGTTTCT  1100
      ||||| ||||||||||||| |||||||||| ||||||||||||||||   
seq2  CAGAC-ATGTTTTCCTTTGGAAAGGTGGGG-TTTTATTCTTTTTGTT--C  1090

seq1  TAAATTAAACCTATTGTGTGTGTCACAATTGTGT-GTGTGTATGTGAT-G  1148
      ||||||||||||| || ||||||||||||||||| ||||||||||||| |
seq2  TAAATTAAACCTA-TGGGTGTGTCACAATTGTGTGGTGTGTATGTGATGG  1139

seq1  TGTATAGAAGAGAA  1162
      ||| ||||||||||
seq2  TGTTTAGAAGAGAA  1153

seq1: chr5_90347620_90347808
seq2: B6Ng01-136F21.g_72_260 (reverse)

seq1  CACACACACACACACACACACACACACACACACACATGCATAACTGGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACATGCATAACTGGGAA  50

seq1  ACAAATTACTGCTTCAGAATATGTACTATTGGACATCTGAGGAATGTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTACTGCTTCAGAATATGTACTATTGGACATCTGAGGAATGTATG  100

seq1  CAAACCAGAAATACAAGAGAAATTCTATAGCTGTGGCATGCACGAATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCAGAAATACAAGAGAAATTCTATAGCTGTGGCATGCACGAATCTG  150

seq1  AGAAAGGAAGTTTGAAGCCAGGGGTGATGTCACGTGACT  189
      |||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGAAGTTTGAAGCCAGGGGTGATGTCACGTGACT  189