BAC Information

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BAC

Clone NameB6Ng01-137J04
Chromosome5 (Build37)
Map Location 32,574,843 - 32,769,934
singlet/doubletdoublet
Overlap genePlb1, EG665350, LOC545743, Ppp1cb
Upstream geneIft172, Fndc4, Gckr, Zfp512, 4930548H24Rik, Xab1, Supt7l, Slc4a1ap, Mrpl33, Rbks, LOC100040000, Bre, Fosl2, LOC672217
Downstream geneLOC634553, LOC675983, Yes1, LOC100039775, Pisd, C330019G07Rik, LOC100040141, Depdc5, Ywhah, LOC100040169, Slc5a1, Spon2, Ctbp1, Maea, 4933407H18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137J04.bB6Ng01-137J04.g
ACCDH937059DH937060
length9091,032
definitionDH937059|Mus musculus domesticus DNA, BAC clone: B6Ng01-137J04, 5' end.DH937060|Mus musculus domesticus DNA, BAC clone: B6Ng01-137J04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,769,034 - 32,769,934)(32,574,843 - 32,575,880)
sequence
gaatttctcaaagggatctgtgatacactctattgtaatactcccctccc
ccacccacacactggcaaacaaaacattgtggtgtagcatgaagaatgga
agatgttgatgaacaggctgggatgctgctgctcaggaataaagaagtat
ccagttcaaagtaagaactcctcttgtgctgacattgaaggaacactcta
cacactctgatacacacacctgaccagaggtatcaaactactaggaatct
agtgtgttcactgccatgcaattctgtaaaatactgagataaaaacagta
aaaatgatcaattacacctagctcctgaaattatatctttgtctatacaa
gaaaatgcaaagtatccagacgtatacctactgcatacaacacagtaatt
gcctcaaaggaaaatacatgactgaaaactgttgttaccagacttacata
attaacaaatagtctcaaatcaaacaaaatcatttcaaagaaaacagtac
ttgtaggcaatgatgaagttcaagatttcaggaaaccttgtctcctctaa
tacctcctcccattcttaaagtctcttctgtgtttagcaaattgtatctt
atatcttgggtatcctaggtttggggctaatatccacttatcagtgagta
catattgtgtgagttcctttgtgaatgtgttacctcactcaggatgatgc
cctccagtccatccatttgcctaggaatttcataaattcattctttttaa
tagcttgagtagttactccattgtgtagatgttccacatttttctgtatc
catttcctctgttgaggggcatctgggttctttccagcttctggttatta
taaataaggctgctatgaacatagtggagcatgtgtccttctaccagttg
gggcatctt
gaattctcctgaagccctctggattttgcttccataaaccctggggttct
ttgaggatggggcaagaagaagtgggagaaagaggtacttccctctgcag
cccagcctccccgctccgccctgtcctctctgaggagcaagacttaaaca
ttcctgacagcactatttttagcagtcttctggctgtcagcttggcgaca
tgttctctgtgtgttccctggagctttcccgccctgctgtcactcacaag
gagcaagggagccgacgggaaggcagcccagagttctggttctaatccca
gtcatttctgtcagccaggggacctgacatggcttgcttgatgtctccat
ctcagtctccttgggagtaaatgagagtgtgcctggagagcagtcgacct
tgggcctggcccacctaggtagatgctcaatttagctcccttcgctgtcc
agggtctgcctcaggagtgacttgacagcatgggatggaggctaagccgc
acaatgaggcagcaaggctgtcttgtcaccctagagagttgattatcttt
tgaggtgacccctggctctctctgtagttctttcagatatcatcagacat
ttcagtccttctgtcctgatgcccacgtgttctcctgggaagggcactgc
agtccacactactgctgagtaagtttttcttcttctccgtctctggggtt
gtgcactcttgctggccttgggtatgtaggaactttgtggggactgacag
ttagagagctttgaactagagctcttcattaagtcaatgccctaatacct
tccccctgctaatttcagtgggctttaaagattaggtcaagtctgccctc
tcaaagccagtgtatttcagtggagcctctggttcagatattggcagctg
tcctgtgagtgagggctttcgccttctgaacattaagaatataaactact
ggattgtgcttcccacttcgcagaagattgtggatccagctaagagctgg
gtaggccctgaaggacacccggtagagctttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_32769034_32769934
seq2: B6Ng01-137J04.b_39_943 (reverse)

seq1  AAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCATAGCA  50
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAGATGCCCCAACTGGT-AGAAGGACACATGCTCCACTATGTTCATAGCA  49

seq1  GCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAAC  100
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GCCTTATTTATAATAACCAGAAGCTGGAAAGAACCCAGATGCCCCTCAAC  99

seq1  AGAGG-AATGGATACAG-AAAATGTGGAACATCTACACAATGGAGT-ACT  147
      ||||| ||||||||||| |||||||||||||||||||||||||||| |||
seq2  AGAGGAAATGGATACAGAAAAATGTGGAACATCTACACAATGGAGTAACT  149

seq1  ACTC-AGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGAT  196
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGAT  199

seq1  GGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGGAACT  246
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGA-CTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGGAACT  248

seq1  CACACAATATGTACTCACTGATAAGTGGATATTAGCCCCAAACCTAGGAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAATATGTACTCACTGATAAGTGGATATTAGCCCCAAACCTAGGAT  298

seq1  ACCCAAGATATAAGATACAATTTGCTAAACACAGAAGAGACTTTAAGAAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGATATAAGATACAATTTGCTAAACACAGAAGAGACTTTAAGAAT  348

seq1  GGGAGGAGGTATTAGAGGAGACAAGGTTTCCTGAAATCTTGAACTTCATC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAGGTATTAGAGGAGACAAGGTTTCCTGAAATCTTGAACTTCATC  398

seq1  ATTGCCTACAAGTACTGTTTTCTTTGAAATGATTTTGTTTGATTTGAGAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCTACAAGTACTGTTTTCTTTGAAATGATTTTGTTTGATTTGAGAC  448

seq1  TATTTGTTAATTATGTAAGTCTGGTAACAACAGTTTTCAGTCATGTATTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTTAATTATGTAAGTCTGGTAACAACAGTTTTCAGTCATGTATTT  498

seq1  TCCTTTGAGGCAATTACTGTGTTGTATGCAGTAGGTATACGTCTGGATAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGAGGCAATTACTGTGTTGTATGCAGTAGGTATACGTCTGGATAC  548

seq1  TTTGCATTTTCTTGTATAGACAAAGATATAATTTCAGGAGCTAGGTGTAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTTTCTTGTATAGACAAAGATATAATTTCAGGAGCTAGGTGTAA  598

seq1  TTGATCATTTTTACTGTTTTTATCTCAGTATTTTACAGAATTGCATGGCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCATTTTTACTGTTTTTATCTCAGTATTTTACAGAATTGCATGGCA  648

seq1  GTGAACACACTAGATTCCTAGTAGTTTGATACCTCTGGTCAGGTGTGTGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACACACTAGATTCCTAGTAGTTTGATACCTCTGGTCAGGTGTGTGT  698

seq1  ATCAGAGTGTGTAGAGTGTTCCTTCAATGTCAGCACAAGAGGAGTTCTTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGTGTGTAGAGTGTTCCTTCAATGTCAGCACAAGAGGAGTTCTTA  748

seq1  CTTTGAACTGGATACTTCTTTATTCCTGAGCAGCAGCATCCCAGCCTGTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAACTGGATACTTCTTTATTCCTGAGCAGCAGCATCCCAGCCTGTT  798

seq1  CATCAACATCTTCCATTCTTCATGCTACACCAC-CTGTTTTGTTTGCCAG  845
      |||||||||||||||||||||||||||||||||  |||||||||||||||
seq2  CATCAACATCTTCCATTCTTCATGCTACACCACAATGTTTTGTTTGCCAG  848

seq1  TGTGTGGGTGGGGGAGGGGAGTATTAC-TTAGAGTGTATCACAGATCCCT  894
      |||||||||||||||||||||||||||  |||||||||||||||||||||
seq2  TGTGTGGGTGGGGGAGGGGAGTATTACAATAGAGTGTATCACAGATCCCT  898

seq1  TTGAGAA  901
      |||||||
seq2  TTGAGAA  905

seq1: chr5_32574843_32575880
seq2: B6Ng01-137J04.g_69_1100

seq1  GAATTCTCCTGAAGCCCTCTGGATTTTGCTTCCATAAACCCTGGGGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGAAGCCCTCTGGATTTTGCTTCCATAAACCCTGGGGTTCT  50

seq1  TTGAGGATGGGGCAAGAAGAAGTGGGAGAAAGAGGTACTTCCCTCTGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGATGGGGCAAGAAGAAGTGGGAGAAAGAGGTACTTCCCTCTGCAG  100

seq1  CCCAGCCTCCCCGCTCCGCCCTGTCCTCTCTGAGGAGCAAGACTTAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCTCCCCGCTCCGCCCTGTCCTCTCTGAGGAGCAAGACTTAAACA  150

seq1  TTCCTGACAGCACTATTTTTAGCAGTCTTCTGGCTGTCAGCTTGGCGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGACAGCACTATTTTTAGCAGTCTTCTGGCTGTCAGCTTGGCGACA  200

seq1  TGTTCTCTGTGTGTTCCCTGGAGCTTTCCCGCCCTGCTGTCACTCACAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCTGTGTGTTCCCTGGAGCTTTCCCGCCCTGCTGTCACTCACAAG  250

seq1  GAGCAAGGGAGCCGACGGGAAGGCAGCCCAGAGTTCTGGTTCTAATCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGGGAGCCGACGGGAAGGCAGCCCAGAGTTCTGGTTCTAATCCCA  300

seq1  GTCATTTCTGTCAGCCAGGGGACCTGACATGGCTTGCTTGATGTCTCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTCTGTCAGCCAGGGGACCTGACATGGCTTGCTTGATGTCTCCAT  350

seq1  CTCAGTCTCCTTGGGAGTAAATGAGAGTGTGCCTGGAGAGCAGTCGACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTCTCCTTGGGAGTAAATGAGAGTGTGCCTGGAGAGCAGTCGACCT  400

seq1  TGGGCCTGGCCCACCTAGGTAGATGCTCAATTTAGCTCCCTTCGCTGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTGGCCCACCTAGGTAGATGCTCAATTTAGCTCCCTTCGCTGTCC  450

seq1  AGGGTCTGCCTCAGGAGTGACTTGACAGCATGGGATGGAGGCTAAGCCGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTGCCTCAGGAGTGACTTGACAGCATGGGATGGAGGCTAAGCCGC  500

seq1  ACAATGAGGCAGCAAGGCTGTCTTGTCACCCTAGAGAGTTGATTATCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGAGGCAGCAAGGCTGTCTTGTCACCCTAGAGAGTTGATTATCTTT  550

seq1  TGAGGTGACCCCTGGCTCTCTCTGTAGTTCTTTCAGATATCATCAGACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGACCCCTGGCTCTCTCTGTAGTTCTTTCAGATATCATCAGACAT  600

seq1  TTCAGTCCTTCTGTCCTGATGCCCACGTGTTCTCCTGGGAAGGGCACTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCCTTCTGTCCTGATGCCCACGTGTTCTCCTGGGAAGGGCACTGC  650

seq1  AGTCCACACTACTGCTGAGTAAG-TTTTCTTCTTCTCCGTCTCTGGGGTT  699
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGTCCACACTACTGCTGAGTAAGTTTTTCTTCTTCTCCGTCTCTGGGGTT  700

seq1  GTGCACTCTTGCTGGCCTTGGGTATGTAGGAAC-TTGTGGGGACTGACAA  748
      ||||||||||||||||||||||||||||||||| |||||||||||||| |
seq2  GTGCACTCTTGCTGGCCTTGGGTATGTAGGAACTTTGTGGGGACTGAC-A  749

seq1  GTCAGAGAGCTTTGAACTAGAGCTCTTCATTAAGTCAATGCCCTAATACC  798
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAGAGCTTTGAACTAGAGCTCTTCATTAAGTCAATGCCCTAATACC  799

seq1  TTCCCCCTGCTAATTTCAGTTGGCTTTAAAGATTAGGTCAAGTCTGCCCC  848
      |||||||||||||||||||| |||||||||||||||||||||||||||| 
seq2  TTCCCCCTGCTAATTTCAGTGGGCTTTAAAGATTAGGTCAAGTCTGCCCT  849

seq1  CTCAGAAGCCAGTGTAGTTCAGTGTAGCCTCTGGTTCAGATATTGGCAGC  898
      |||| ||||||||||| ||||||| |||||||||||||||||||||||||
seq2  CTCA-AAGCCAGTGTATTTCAGTGGAGCCTCTGGTTCAGATATTGGCAGC  898

seq1  TGTCCTGGGAGTGAGGGC-ATCGCCTTCCTGAACATTAAGAATATAACTT  947
      ||||||| ||||||||||  ||||||| |||||||||||||||||||  |
seq2  TGTCCTGTGAGTGAGGGCTTTCGCCTT-CTGAACATTAAGAATATAAACT  947

seq1  TCTGGATTGTGCTTCCCACTTCGCAGAGATTTGTGGATTCAGGCTAAAGA  997
       ||||||||||||||||||||||||||   |||||||| || ||| ||||
seq2  ACTGGATTGTGCTTCCCACTTCGCAGAAGATTGTGGATCCA-GCT-AAGA  995

seq1  GCTGGTGAGGCGCCTGAAGGACAACCCGGTAAGAGGCTTTG  1038
      |||||  |||| |||||||||| ||||||| ||| ||||||
seq2  GCTGGGTAGGC-CCTGAAGGAC-ACCCGGT-AGA-GCTTTG  1032