BAC Information

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BAC

Clone NameB6Ng01-137P21
Chromosome5 (Build37)
Map Location 15,032,223 - 15,033,027
singlet/doubletsinglet
Overlap geneSpeer4c
Upstream geneSema3e, LOC100042957, Pclo, ENSMUSG00000033219, LOC624245, Speer8-ps1
Downstream geneSpeer4d, 4930572O03Rik, Speer7-ps1, 4930519H02Rik, LOC100041781, Cacna2d1, LOC668121
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137P21.bB6Ng01-137P21.g
ACCDH937366DH937367
length1,151807
definitionDH937366|Mus musculus domesticus DNA, BAC clone: B6Ng01-137P21, 5' end.DH937367|Mus musculus domesticus DNA, BAC clone: B6Ng01-137P21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttttaatagctgagtaaatgtgtaaatgtaccatatttt
ctgtatccattcctctgctgaaggacatctgggttctttccagctcctgg
ctattaaaaataaggctgctatgaacatagtggaacatgtgtccttatta
caacatcttctggatatatatccaggagtggtatacctgggtactatgtc
cacttttctgaggtactgccaaactgacttccagagtggttgtaccagtt
tgcaatcccaccagcaatggcgctcttcttttttcacatccttgccagca
tctgtggtcacctgagcttctgatcttagccattctgactggtgtgaggt
ggaatctcagggtcattttgatttgtgtttccctgatgactaatgatgtt
gaacatttctttaggtgcttatcagacattcaagtttcctcagttaaaac
ttctctgtttaggtctgatccccatttttaataggattatttagttctca
ggagtctaacttcatgagttctttttatatattggatattagccctctat
aggatgaaggattgataaagatcttttcccaatctgttggttgccttttt
gtcttattgacagttttctttgccttagagaagctttgcagttttatgag
gtccaatttttttgattcttaatctttcagcataagccacttttgttctg
ttcaggaaatttccccccatgcccatgtgttcaaggctgttccccacttt
ctcttttattagtttcagtgaatctggctttatatggcggttcttgatcc
acttggacataagctttgtacaaggagataagaatggaaccatttgcctt
cttctacatgataaccgccagttgaaccagcaccatttgttgaaaatgct
gtcttttttccaactgaatgggtttacctccttgtcaaagatcagtgacc
agaggtgtgtgggttattctgggtctcatctattccactgatctagctgc
tctctctgtccaataaccacaaagtttatcactatgctctgtaataagct
tgaggttagggatggtgaattcccgaagtcttttgtggaatagtttggct
ttcctgattttggtattccaatgaactgccaatggcgttctaattctatg
a

gaattcttagcaacctctgtgatgtcaccagtgttgtagtgacaacaaac
tcactgagatttctcactcagaggctggacattgcagtgatggccttgtt
tgcccgactctgcagacgttttcagagagccaatgtggatgggagagaga
ccagagaggggaggaaggatgctgaccttccatctgagaggaatgaagga
caaaggagggggacttggcgaatgtggagtaagtcctgggaagtggatgt
tgagcttcctggtaggggtggcctgagctggcctttccagtaatgtggaa
ctggagactctgggtactgaaaacatttccatggttatcacaattcttga
acatcaaggatttcagaacagtacttttccatcccctaaggcaggcattg
gcaaggtcaaagctgttatgctatgaacttcaagtctttacttgcactgg
gtattgtgggtgttacatggggacagaatgagaccatcaggagtgacagc
gggtctaagcaatgccagtttgggggagggaaatcctgcacttcagtcca
tggctccttttagctcctgtagttatgtgacattagtgacagggagagaa
tggtgctccagaccatgacctcatgttctcagaactactctgacctcctg
tttgtgacagttcctaccttacctttctttatcaccaattgtggttggca
ggcatttctatgctgtaaacaaagaactatcagttgatacacacagacac
agggggattctattgctacttctcggggtgtttggtgtttcgagggtggg
agggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_15032223_15033027
seq2: B6Ng01-137P21.g_68_874 (reverse)

seq1  CCCCCCTCCCACCCTCGAAACACCAAATA-CCCGAGAAGTAGCAATAGAA  49
      ||||||||||||||||||||||||||| | ||||||||||||||||||||
seq2  CCCCCCTCCCACCCTCGAAACACCAAACACCCCGAGAAGTAGCAATAGAA  50

seq1  TCCCCCTCTGTCTGTGTGTATCAATTGATAGTTCTTTGTTTACAGCATAG  99
      ||||||| |||||||||||||||| |||||||||||||||||||||||||
seq2  TCCCCCTGTGTCTGTGTGTATCAACTGATAGTTCTTTGTTTACAGCATAG  100

seq1  AAATGCCTGCCAACCACAATTGGTGATAAAGAAAGGTAAGGTAGGAACTG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCTGCCAACCACAATTGGTGATAAAGAAAGGTAAGGTAGGAACTG  150

seq1  TCACAAACAGGAGGTCAGAGTAGTTCTGAGAACATGAGGTCATGGTCTGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAACAGGAGGTCAGAGTAGTTCTGAGAACATGAGGTCATGGTCTGG  200

seq1  AGCACCATTCTCTCCCTGTCACTAATGTCACATAACTACAGGAGCTAAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCATTCTCTCCCTGTCACTAATGTCACATAACTACAGGAGCTAAAA  250

seq1  GGAGCCATGGACTGAAGTGCAGGATTTCCCTCCCCCAAACTGGCATTGCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCATGGACTGAAGTGCAGGATTTCCCTCCCCCAAACTGGCATTGCT  300

seq1  TAGACCCGCTGTCACTCCTGATGGTCTCATTCTGTCCCCATGTAACACCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCCGCTGTCACTCCTGATGGTCTCATTCTGTCCCCATGTAACACCC  350

seq1  ACAATACCCAGTGCAAGTAAAGACTTGAAGTTCATA-CATAACAGCTTTG  398
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACAATACCCAGTGCAAGTAAAGACTTGAAGTTCATAGCATAACAGCTTTG  400

seq1  ACCTTGCCAACGCCTGCCTTAGGGGATGGAAAAGTACTGTTCTGAAATCC  448
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGCCAATGCCTGCCTTAGGGGATGGAAAAGTACTGTTCTGAAATCC  450

seq1  TTGATGTTCAAGAATTTTGATAACCATGGAAATGTTTTCACTACCCAGAG  498
      |||||||||||||||| ||||||||||||||||||||||| |||||||||
seq2  TTGATGTTCAAGAATTGTGATAACCATGGAAATGTTTTCAGTACCCAGAG  500

seq1  TCTCCAGTTCCACATTACTGGAAAGGCCACCTCAGGCCACCTCTACCAGG  548
      ||||||||||||||||||||||||||||| ||||||||||| ||||||||
seq2  TCTCCAGTTCCACATTACTGGAAAGGCCAGCTCAGGCCACCCCTACCAGG  550

seq1  AAGCTCAACATCCACTTCCCAGGACTTACTCCACATTCGCCAAGTCCACC  598
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAGCTCAACATCCACTTCCCAGGACTTACTCCACATTCGCCAAGTCCCCC  600

seq1  TCCTTCGTCCTTCATTCCTCTCAGATGGAAGGTCAGCATCCTTCCTCCCC  648
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGTCCTTCATTCCTCTCAGATGGAAGGTCAGCATCCTTCCTCCCC  650

seq1  TCTCTGGTATCTCTCCCATCCACATTGGCTCTCTGAAAAAGTCTGCAGAG  698
      |||||||| |||||||||||||||||||||||||||||| ||||||||||
seq2  TCTCTGGTCTCTCTCCCATCCACATTGGCTCTCTGAAAACGTCTGCAGAG  700

seq1  TCGGGCAAACAAGGCCATCACTGCAATGTCCAGCCTCTGACTGAGAAATC  748
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCGGGCAAACAAGGCCATCACTGCAATGTCCAGCCTCTGAGTGAGAAATC  750

seq1  TCAGTGAGTTTGTTGTCACTACAACACTGGTGACATCACAGAGGTTGCTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGAGTTTGTTGTCACTACAACACTGGTGACATCACAGAGGTTGCTA  800

seq1  AGAATTC  805
      |||||||
seq2  AGAATTC  807


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