BAC Information

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BAC

Clone NameB6Ng01-142A02
Chromosome5 (Build37)
Map Location 7,448,513 - 7,449,290
singlet/doubletsinglet
Overlap genenone
Upstream geneEG435830, LOC100042651, 4921511H03Rik, LOC242823
Downstream geneLOC667767, EG546855, Steap4, Sri, LOC433840, Adam22, Dbf4, Slc25a40
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142A02.bB6Ng01-142A02.g
ACCDH940314DH940315
length1,199778
definitionDH940314|Mus musculus domesticus DNA, BAC clone: B6Ng01-142A02, 5' end.DH940315|Mus musculus domesticus DNA, BAC clone: B6Ng01-142A02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatacagaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctaagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcttgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagcattatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttccctaaacacatgaaaactca
agaaaaatgtagactgaagtgtagacactatgcccctccttagaagtggg
aacaaaacacccttggaaggagttacagagacaaagttttggagctgaga
ttaaagggtggacccatgtagagactgccttatccagggatccaccccat
aatcagcatccaaaacgctgacaccattgcatacactagcaagatttatc
aaagggacccaaatgtagctgtctcttgtgagactatggcgggggcttag
caaacacagaagtggatgcccccagccagctaatggacgatccagggctc
ccatggaggagctggaaaaataccctaggagttaagggatctgtaccctt
ttaggggaatcaccttatgaactaccagtaccccgggagtctcttgactc
tgtgccattgtatccaaaaagatgacctagtccgcctaccccgggaaaga
agtgggccatttggaccaccaacttttatgccccataccagggtgaccgc
cctggccccatataggttgaaggtgtcggtgtaagggtgatgtgggagc
gaattcagaatagatttaaaatcagacagagaaattaaaaaaaatctggt
taaagagcatctatgaggctaaaaacatattagagcataaggaagtctta
ttcataattagatgtcttgaatgactgcaccttcatctgagtaaaggtta
ataagcaacgggctttttatgtgttttacctgtcaaggtctggaatgact
gtcatcgttcaatggagaggtttttaattatgctaaatcaaaaatgcttt
tatgttgctccctggtcacatattagaggtgacatcaggaactggctttc
tttaatggcagctctagaggttgcctgcttcataatgttttgccaaagct
tttactttccttttataaaatttcaccgttttttctttttctttttttaa
agcctacagctcctttgcacatagattatggctttgtttttgtaggactc
ctcagtgtccagacaagtgtatctctgcatcaatagttgtttcctatgcc
ctttctagggctccttttttgtctggtttgttctagccaggtgtgtttgg
ttttatttatcttatttttatttggagaaagggaagggaagggggagaat
ttataattatagtatagtttctaaatatttttcaaaaatttaaaataact
ttcagtgtctttgattcctttttttccccataataccattctctatttaa
tgaaactaggatttcttggtttgctatagggggaatatggaaaatgaacc
agtaacttttgaagtatcagaatatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_7448513_7449290
seq2: B6Ng01-142A02.g_66_843

seq1  GAATTCAGAATAGATTTAAAATCAGACAGAGAAATTAAAAAAAATCTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAATAGATTTAAAATCAGACAGAGAAATTAAAAAAAATCTGGT  50

seq1  TAAAGAGCATCTATGAGGCTAAAAACATATTAGAGCATAAGGAAGTCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGCATCTATGAGGCTAAAAACATATTAGAGCATAAGGAAGTCTTA  100

seq1  TTCATAATTAGATGTCTTGAATGACTGCACCTTCATCTGAGTAAAGGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAATTAGATGTCTTGAATGACTGCACCTTCATCTGAGTAAAGGTTA  150

seq1  ATAAGCAACGGGCTTTTTATGTGTTTTACCTGTCAAGGTCTGGAATGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCAACGGGCTTTTTATGTGTTTTACCTGTCAAGGTCTGGAATGACT  200

seq1  GTCATCGTTCAATGGAGAGGTTTTTAATTATGCTAAATCAAAAATGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCGTTCAATGGAGAGGTTTTTAATTATGCTAAATCAAAAATGCTTT  250

seq1  TATGTTGCTCCCTGGTCACATATTAGAGGTGACATCAGGAACTGGCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGCTCCCTGGTCACATATTAGAGGTGACATCAGGAACTGGCTTTC  300

seq1  TTTAATGGCAGCTCTAGAGGTTGCCTGCTTCATAATGTTTTGCCAAAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGGCAGCTCTAGAGGTTGCCTGCTTCATAATGTTTTGCCAAAGCT  350

seq1  TTTACTTTCCTTTTATAAAATTTCACCGTTTTTTCTTTTTCTTTTTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTTCCTTTTATAAAATTTCACCGTTTTTTCTTTTTCTTTTTTTAA  400

seq1  AGCCTACAGCTCCTTTGCACATAGATTATGGCTTTGTTTTTGTAGGACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTACAGCTCCTTTGCACATAGATTATGGCTTTGTTTTTGTAGGACTC  450

seq1  CTCAGTGTCCAGACAAGTGTATCTCTGCATCAATAGTTGTTTCCTATGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGTCCAGACAAGTGTATCTCTGCATCAATAGTTGTTTCCTATGCC  500

seq1  CTTTCTAGGGCTCCTTTTTTGTCTGGTTTGTTCTAGCCAGGTGTGTTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAGGGCTCCTTTTTTGTCTGGTTTGTTCTAGCCAGGTGTGTTTGG  550

seq1  TTTTATTTATCTTATTTTTATTTGGAGAAAGGGAAGGGAAGGGGGAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTATCTTATTTTTATTTGGAGAAAGGGAAGGGAAGGGGGAGAAT  600

seq1  TTATAATTATAGTATAGTTTCTAAATA-TTTTCAAAAATTTAAAATAACT  649
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTATAATTATAGTATAGTTTCTAAATATTTTTCAAAAATTTAAAATAACT  650

seq1  TTCAGTGTCTTTGATTCCTTTTTTTCCCCATAATACCATTCTCTATTTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGTCTTTGATTCCTTTTTTTCCCCATAATACCATTCTCTATTTAA  700

seq1  TGAAACTAGAATTTCTTGGTTTGCTATAGGGGGAAATATGGAAAATGAAC  749
      ||||||||| ||||||||||||||||||||||| ||||||||||||||||
seq2  TGAAACTAGGATTTCTTGGTTTGCTATAGGGGG-AATATGGAAAATGAAC  749

seq1  CAGTAACCTTTGAAGTATCAGAATATATT  778
      ||||||| |||||||||||||||||||||
seq2  CAGTAACTTTTGAAGTATCAGAATATATT  778