BAC Information

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BAC

Clone NameB6Ng01-143D16
Chromosome15 (Build37)5 (Build37)
Map Location 32,715,211 - 32,715,8167,575,050 - 7,575,306
singlet/doubletsingletsinglet
Overlap geneLOC100040962
Upstream geneTas2r119, 0610007N19Rik, Sema5a
Downstream geneSdc2, Pgcp, 1700084J12Rik, Tspyl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143D16.bB6Ng01-143D16.g
ACCDH941222DH941223
length906257
definitionDH941222|Mus musculus domesticus DNA, BAC clone: B6Ng01-143D16, 5' end.DH941223|Mus musculus domesticus DNA, BAC clone: B6Ng01-143D16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(32,715,211 - 32,715,816)(7,575,050 - 7,575,306)
sequence
gaattcagaactcctcagctggggaacggtggtaatgaagtgttcccgta
aaacagactgttgagaaggattcaactgcgtgaattcagaactcttcagc
tggggaacagggtacccgtaagtatagctttacaaggtaagtctggcctt
gaactttctaacgaaattcaagacagtctatcagaagtaaagtgggaaat
agctttacaaggtatgtttggccttgaactttctctagtgttaggagccc
ttttgttccttttcacgtgttatcaagtggttaaggcagggctgaaaatt
ctggatggaattcagggcaatctatcagaagtaaagcggggagagagagt
aggagcaaagaggaaatatggtacacaaaataagtatacaggcctttcca
cgggtcttgaacctgaggaaaagtttaggtcaggtaagaatacctgggga
gagattagaaggaaggaaaagaaaaaagatcaattagcggaggtttctag
gagaaggagcctatactcatcactagatgagctcaaggagccagttctta
atagttctgaatcagatgaaaaggctagtagggcctggaaggcgctctcc
cgagcaggtgaagccactggacaactaacaaagatcgtccagggacctca
ggagtcattctcagattttgtggccagaatgacagaggcagcagagcgta
tttttggagattcagagcaagccgcacctctagtagaatagcttatttat
gagcaagccacgcaggaatgcagagcggccatagccccaagaaagaacaa
aggtttacaagactggcttagggtttgtcgggagcttgggggacctctca
ttatgcgttacttccattcagtatgagaaatttactaggcagctaatttg
ttcaaa
tcctcacatgactccatttctggactgtgttccaatagaaggcaattaca
gaggaagtgagggggagggtaaaataaaagtaaggatgtctgaaaaagtc
ataaggaatcatattattaaccacctacctaaaatattcatcatataaat
aagttgatatgcaaatatatatatatacatattttaaattaaaattttct
atcaggttcctcatccaggaggtgaggaggtgaatggaatgggggatcag
gtgtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_32715211_32715816
seq2: B6Ng01-143D16.b_49_573 (reverse)

seq1  TCTAGTGATGAGTATAGGCTCCTTCTCCTAGAGACCTCCGCTAATTGATC  50
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCTAGTGATGAGTATAGGCTCCTTCTCCTAGAAACCTCCGCTAATTGATC  50

seq1  TTTTTTCTTTTCCTTCCTTCTAATCTCTCCCCAGGTATTCTTACCTGACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTTTCCTTCCTTCTAATCTCTCCCCAGGTATTCTTACCTGACC  100

seq1  TAAACTTTTCCTCAGGTTCAAGACCCGTGGAAAGGCCTATATACTTATTT  150
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAAACTTTTCCTCAGGTTCAAGACCCGTGGAAAGGCCTGTATACTTATTT  150

seq1  TGTGTACAATATTTCCTCTTTGCTCCTACTCTCTCTCCCCGCTTTACTTC  200
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACCATATTTCCTCTTTGCTCCTACTCTCTCTCCCCGCTTTACTTC  200

seq1  TGATAGATTGCCCTGAATTTCATCCAGAATTTTCAGCCCTGCCTTAACCG  250
      ||||||||||||||||||| ||||||||||||||||||||||||||||| 
seq2  TGATAGATTGCCCTGAATTCCATCCAGAATTTTCAGCCCTGCCTTAACCA  250

seq1  CTTGATAACATGTGAAAAGGAACAAAAGGGCTCCTAACACTAGAAAAAGT  300
      |||||||||| ||||||||||||||||||||||||||||||||| |||||
seq2  CTTGATAACACGTGAAAAGGAACAAAAGGGCTCCTAACACTAGAGAAAGT  300

seq1  TCAAGGCCAAACATACCTTGTAAAGCTATTTCCCACTTTACTTCTGATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGCCAAACATACCTTGTAAAGCTATTTCCCACTTTACTTCTGATAG  350

seq1  ACTGTCTTGAATTTCGTTAGAAAGTTCAAGACCAGACTTACCTTGTAAAG  400
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACTGTCTTGAATTTCGTTAGAAAGTTCAAGGCCAGACTTACCTTGTAAAG  400

seq1  CTATACTTACGGGTACCCTGTTCCCCAGCTGAAGAGTTCTGAATTCACGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACTTACGGGTACCCTGTTCCCCAGCTGAAGAGTTCTGAATTCACGC  450

seq1  AGTTGAATCCTTCTCAACAGTCTGTGTTACGGGAACACTTCATTACCACC  500
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGTTGAATCCTTCTCAACAGTCTGTTTTACGGGAACACTTCATTACCACC  500

seq1  GTTCCCCAGCTGAAGAGTTCTGAATTCACACAGTTGAATCCTTCTCAACA  550
      ||||||||||||| |||||||||||                         
seq2  GTTCCCCAGCTGAGGAGTTCTGAAT-------------------------  525

seq1  GTCTGTTTTACGGGAACACTTCATTACCACCATTCCCCAGCTGAGGAGTT  600
                                                        
seq2  --------------------------------------------------  525

seq1  CTGAAT  606
            
seq2  ------  525

seq1: chr5_7575050_7575306
seq2: B6Ng01-143D16.g_73_329 (reverse)

seq1  CCCACACCTGATCCCCCATTCCATTCACCTCCTCACCTCCTGGATGAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACCTGATCCCCCATTCCATTCACCTCCTCACCTCCTGGATGAGGA  50

seq1  ACCTGATAGAAAATTTTAATTTAAAATATGTATATATATATATTTGCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGATAGAAAATTTTAATTTAAAATATGTATATATATATATTTGCATA  100

seq1  TCAACTTATTTATATGATGAATATTTTAGGTAGGTGGTTAATAATATGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTTATTTATATGATGAATATTTTAGGTAGGTGGTTAATAATATGAT  150

seq1  TCCTTATGACTTTTTCAGACATCCTTACTTTTATTTTACCCTCCCCCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATGACTTTTTCAGACATCCTTACTTTTATTTTACCCTCCCCCTCA  200

seq1  CTTCCTCTGTAATTGCCTTCTATTGGAACACAGTCCAGAAATGGAGTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTGTAATTGCCTTCTATTGGAACACAGTCCAGAAATGGAGTCAT  250

seq1  GTGAGGA  257
      |||||||
seq2  GTGAGGA  257