BAC Information

Click to search

BAC

Clone NameB6Ng01-145F09
Chromosome5 (Build37)
Map Location 45,254,888 - 45,255,552
singlet/doubletsinglet
Overlap genenone
Upstream geneCd38, EG665989, EG665994, LOC100040677, EG384179, Fgfbp1, Prom1, LOC100041413, Tapt1, LOC100040717, LOC545747, Ldb2, LOC100041481
Downstream geneLOC100040737, Qdpr, EG624224, Lap3, LOC100040762, Med28, 9630031F12Rik, 9630001P10Rik, 1600023N17Rik, Lcorl, LOC100041576
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145F09.bB6Ng01-145F09.g
ACCDH942767DH942768
length1,154665
definitionDH942767|Mus musculus domesticus DNA, BAC clone: B6Ng01-145F09, 5' end.DH942768|Mus musculus domesticus DNA, BAC clone: B6Ng01-145F09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaactcaattcttcaacgaattagaaatggcaatcggcagattc
atctggaataacaaaataccgaggatagcaaaaactcttctcaaggataa
aagaacctctggtggaatcaccatgccggacctgaaactgtactacagag
caattgtgatcaaaactgcatggtactggtatagagacagacaagtagac
caatggagcagaattgaagacccagagatgaatccacacacctatggtca
cttgatctttgacaagggagctataaccatccagtggaaaaaagacagca
ttttcaacaaatggtgctggcacaactggcggttatcatatagaagaatg
cgaattgatccatttctatctccttgtactaaggtcaaatctaagtggat
taaggaattccacataaaaccagagacactgaaacttatagaggagaaag
tattgaaaagcctcgaagatatgggtacaggggaaaaattcccgaataga
acagcaatggcttgtgctgtaagatcaagaatcgataaatgggacctcat
taaattgcaaagcttctgcaaagcaaaagacaccgtcaataagacaaaaa
ggccaccaacaaattgggaaaggatctttacctatcctaaatcagatagg
ggactaatatccaacatatatacagaactcaagaaggtggacttcagaaa
atcaaataaccccattaaaaatggggctcagagctgaacaaagaattctc
acctgaggaataccgaatggcagagaagcacctgaaaaaatgttcaacat
ccttaatcatcaggaaatgcaaatcaaaacaaccctgagattccacctca
caccagtcagaatggctaagatcaaaaattcagtgacagcagatgctggc
atggatgtggagaaagaggaacactcctccatttttggtgggattgcaag
cttgtacaaccactcctgaaatcagtctggcggttctcagaaatggacat
agtactaccgagatccgcaatacttcttctgggcatatattcagaagatt
tcccaacgttaagagacacatgcttcacctatgtcatagcagcttattta
tagcagaagctgtaaaaacctgagcccttcacagagaatggaacagaaaa
tggg
gaattcataaatgcaagggccacgtcatgtccagaaaacagcattttaca
gctcattctcatctgctctgaccttttctctctcctcttcagaaacattc
cctgagcggatagaatagtgggtagtagccctgcctgtttaaccttcttc
attgtctcttcccccacttctttcttctttcccatctctccttctctccc
tccatttctccatccctctccctctttttcttctccactttccttttttc
tttaaggctgtaaccgaggctcttaaacgtgcctggataaaataggaccc
aggaattcaaaccccttccagcacacagagatgttgatctcagactgcta
acatatttcaaactcccctgaagttctctggtgtctgaatcccgcaggca
gattattctaattgcctctctcctactctctggatggctgggtcacctcc
acccactgcttctcctcctgcttgcagcaagctctggccttttaaaattg
ctgcttctaatgtgctaccaaaatagggaatcagaaaactaagcttgtaa
caatagcttctgaaagaagagctaagcttcctaagtggttttcttgtgtg
tagctcttggggacatgtgcatttatttatttgtgtgtatgtgtgtgtgt
gtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_45254888_45255552
seq2: B6Ng01-145F09.g_68_732

seq1  GAATTCATAAATGCAAGGGCCACGTCATGTCCAGAAAACAGCATTTTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAATGCAAGGGCCACGTCATGTCCAGAAAACAGCATTTTACA  50

seq1  GCTCATTCTCATCTGCTCTGACCTTTTCTCTCTCCTCTTCAGAAACATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTCTCATCTGCTCTGACCTTTTCTCTCTCCTCTTCAGAAACATTC  100

seq1  CCTGAGCGGATAGAATAGTGGGTAGTAGCCCTGCCTGTTTAACCTTCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGCGGATAGAATAGTGGGTAGTAGCCCTGCCTGTTTAACCTTCTTC  150

seq1  ATTGTCTCTTCCCCCACTTCTTTCTTCTTTCCCATCTCTCCTTCTCTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTCTTCCCCCACTTCTTTCTTCTTTCCCATCTCTCCTTCTCTCCC  200

seq1  TCCATTTCTCCATCCCTCTCCCTCTTTTTCTTCTCCACTTTCCTTTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTCTCCATCCCTCTCCCTCTTTTTCTTCTCCACTTTCCTTTTTTC  250

seq1  TTTAAGGCTGTAACCGAGGCTCTTAAACGTGCCTGGATAAAATAGGACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGCTGTAACCGAGGCTCTTAAACGTGCCTGGATAAAATAGGACCC  300

seq1  AGGAATTCAAACCCCTTCCAGCACACAGAGATGTTGATCTCAGACTGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTCAAACCCCTTCCAGCACACAGAGATGTTGATCTCAGACTGCTA  350

seq1  ACATATTTCAAACTCCCCTGAAGTTCTCTGGTGTCTGAATCCCGCAGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTCAAACTCCCCTGAAGTTCTCTGGTGTCTGAATCCCGCAGGCA  400

seq1  GATTATTCTAATTGCCTCTCTCCTACTCTCTGGATGGCTGGGTCACCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTCTAATTGCCTCTCTCCTACTCTCTGGATGGCTGGGTCACCTCC  450

seq1  ACCCACTGCTTCTCCTCCTGCTTGCAGCAAGCTCTGGCCTTTTAAAATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTGCTTCTCCTCCTGCTTGCAGCAAGCTCTGGCCTTTTAAAATTG  500

seq1  CTGCTTCTAATGTGCTACCAAAATAGGGAATCAGAAAACTAAGCTTGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTAATGTGCTACCAAAATAGGGAATCAGAAAACTAAGCTTGTAA  550

seq1  CAATAGCTTCTGAAAGAAGAGCTAAGCTTCCTAAGTGGTTTTCTTGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCTTCTGAAAGAAGAGCTAAGCTTCCTAAGTGGTTTTCTTGTGTG  600

seq1  TAGCTCTTGGGGACATGTGCATTTATTTATTTGTGTGTATGTGTGTGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTTGGGGACATGTGCATTTATTTATTTGTGTGTATGTGTGTGTGT  650

seq1  GTGTGTGTGTGTGTG  665
      |||||||||||||||
seq2  GTGTGTGTGTGTGTG  665