BAC Information

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BAC

Clone NameB6Ng01-145O14
Chromosome5 (Build37)
Map Location 42,955,591 - 42,956,333
singlet/doubletsinglet
Overlap genenone
Upstream geneRab28, Bapx1, A230054D04Rik, LOC384308, LOC100040588, EG636612
Downstream geneLOC433883, EG665934, Cpeb2, C1qtnf7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145O14.bB6Ng01-145O14.g
ACCDH943190DH943191
length1,1621,153
definitionDH943190|Mus musculus domesticus DNA, BAC clone: B6Ng01-145O14, 5' end.DH943191|Mus musculus domesticus DNA, BAC clone: B6Ng01-145O14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagaaatttgactccataaaaccaaataaccctattaaaaagtg
gggtacagagctaaacaaagaattctcaactgaggaatactgaataatcc
aggaacacctaaagaaatgttcaacttccttaattatcagggaaatacaa
atcaaaacaaccctgagattctacttcacaccagtcagaatgactaagtt
caaaatttcaggtgacagcagatgcaggtgaggatgtggagaaagagaaa
cattcctccattgtctatgggattacaagctggtacaactactctggaaa
tcagtttgatggttcctcagaaagttggacatattgccaccagaggaccc
attgttggtaggattgtaagctagtacaaccactctggaaatcagtctgg
tggttccttagaaaattagacatagtattacctgaggacccagctatacc
ctcctgggcatatacacaaaagatgctgtaacatatatcaagaacacatg
ctccactaagttcatagcagcctcatttatagcagccagaagctagaaag
aacccagatgtccttcaacagaggaatgaatatagaaaatgtggtacatt
taaaaagtggagtactattcagcttttaaaaacaaggaatttatgaaatt
cgttggcaaatggatggaactagaaaatatcatattgagtaaggttatgc
aatcgcaaaagaaagcacatggtatgcactcactgataagtggatattag
ccctaaaactgagaatacccaagtcacagaccacatgaagctcaagaaga
aggaagaccaaaaggtgggtgctttggtccttcttagaagaggggacaaa
atactcacaggagcagatatggagataaagtgtagagcagaggaaaggct
gtccagagactgctccgcctggagatatatcccattattatatatttatt
gcactagcctgttggctgcttgaaggcataattttgataagtagattctt
gatctatagcatctaagatgctgtctacattacctggaaacacatgcatg
cataatagaatgaatgcaggcagcatcaatgaaatcaggacaactagaaa
aaaagaaaaggctatggctggatcatgaagaatgcctcacctcatgatga
ccttgtctagct
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccactccataatc
agcatccaaacgctgacaccattgcatacactagcaagatttttattgaa
aggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaa
cacagaagtgatgctcacagtcagctaatgatggatcatagggctccaat
gagagctagagaagtagccaggagctaaaggatctgcaccttatagtgga
catcatatgagctacagtaccccgagcttctgacctctgctgctattatc
aaagatgcctagtcggcaatacttgaaagagtcaatggactgcaccttta
atgtccatcaggatttcgagcaaagaggaatggtgtggcagagagattgg
gtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_42955591_42956333
seq2: B6Ng01-145O14.b_486_1210

seq1  ACCCAGCTATACCCTCCTGGGCATATACACAAAAGATGCTGTAACATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGCTATACCCTCCTGGGCATATACACAAAAGATGCTGTAACATATA  50

seq1  TCAAGAACACATGCTCCACTAAGTTCATAGCAGCCTCATTTATAGCAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAACACATGCTCCACTAAGTTCATAGCAGCCTCATTTATAGCAGCC  100

seq1  AGAAGCTAGAAAGAACCCAGATGTCCTTCAACAGAGGAATGAATATAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTAGAAAGAACCCAGATGTCCTTCAACAGAGGAATGAATATAGAA  150

seq1  AATGTGGTACATTTAAAAAGTGGAGTACTATTCAGCTTTTAAAAACAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGTACATTTAAAAAGTGGAGTACTATTCAGCTTTTAAAAACAAGG  200

seq1  AATTTATGAAATTCGTTGGCAAATGGATGGAACTAGAAAATATCATATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATGAAATTCGTTGGCAAATGGATGGAACTAGAAAATATCATATTG  250

seq1  AGTAAGGTTATGCAATCGCAAAAGAAAGCACATGGTATGCACTCACTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGGTTATGCAATCGCAAAAGAAAGCACATGGTATGCACTCACTGAT  300

seq1  AAGTGGATATTAGCCCTAAAACTGAGAATACCCAAGTCACAGACCACATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGATATTAGCCCTAAAACTGAGAATACCCAAGTCACAGACCACATG  350

seq1  AAGCTCAAGAAGAAGGAAGACCAAAAGGTGGGTGCTTTGGTCCTTCTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCAAGAAGAAGGAAGACCAAAAGGTGGGTGCTTTGGTCCTTCTTAG  400

seq1  AAGAGGGGACAAAATACTCACAGGAGCAGATATGGAGATAAAGTGTAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGGACAAAATACTCACAGGAGCAGATATGGAGATAAAGTGTAGAG  450

seq1  CAGAGGAAAGGCTGTCCAGAGACTGCTCCGCCTGGAGATATATCCCATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAAAGGCTGTCCAGAGACTGCTCCGCCTGGAGATATATCCCATTA  500

seq1  TTATATATTTATTGCACTAGCCTGTTGGCTGCTTGAAGGCAATAATTTTG  550
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTATATATTTATTGCACTAGCCTGTTGGCTGCTTGAAGGC-ATAATTTTG  549

seq1  ATAAGTAGATTCTTGATCTATAGCATCTAAGATGCTGTCTACATTTACCT  600
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATAAGTAGATTCTTGATCTATAGCATCTAAGATGCTGTCTACA-TTACCT  598

seq1  GGAACACACAATGCATGCAATAATAGAATGAATGCAGGCAAGCAATCAAA  650
      |||| |||| |||||||| |||||||||||||||||||| ||| ||| ||
seq2  GGAA-ACAC-ATGCATGC-ATAATAGAATGAATGCAGGC-AGC-ATC-AA  642

seq1  TGAAATACAAAGACAACTAAGAAAAAAAGAAAAAGGCTAGTGCTGAGATT  700
      ||||||   | ||||||| |||||||||| |||||||||  |||| ||  
seq2  TGAAAT--CAGGACAACT-AGAAAAAAAG-AAAAGGCTATGGCTG-GA--  685

seq1  TCATGAAGAATGCCTCACCTCAATGATGGAACTTTGTCTAGCT  743
      ||||||||||||||||||||| ||||||  || ||||||||||
seq2  TCATGAAGAATGCCTCACCTC-ATGATG--ACCTTGTCTAGCT  725